GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:09:07

Sequence gi568815576f:35446810_35652029 : 205220 bp : 50.65% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1613   1860  248  2  2   95   21   173 0.252   8.40
 1.02 Term +   7616   7704   89  0  2   92   47    97 0.305   3.82
 1.03 PlyA +  10721  10726    6                               1.05

 2.00 Prom +  11362  11401   40                              -7.06
 2.01 Init +  25754  25815   62  1  2   57   93    90 0.005   5.12
 2.02 Intr +  29965  30128  164  1  2  106   73    39 0.001   3.82
 2.03 Intr +  31793  31931  139  0  1   63   99    48 0.001   2.92
 2.04 Intr +  43417  43526  110  1  2  144   96     7 0.678   7.03
 2.05 Intr +  44770  45236  467  2  2   78   69   333 0.265  23.25
 2.06 Intr +  51962  52054   93  1  0   42  121    13 0.335   0.16
 2.07 Intr +  52112  52199   88  1  1  142   68     8 0.510   3.74
 2.08 Intr +  73520  73592   73  0  1   83   73    35 0.063  -0.04
 2.09 Intr +  76155  76268  114  0  0   79  115    37 0.315   5.06
 2.10 Term +  80223  80349  127  0  1   77   46    79 0.204   0.36
 2.11 PlyA +  84655  84660    6                               1.05

 3.05 PlyA -  85205  85200    6                               1.05
 3.04 Term -  87248  86602  647  0  2   94   43  1937 0.999 184.09
 3.03 Intr -  93862  93809   54  2  0  130   33    27 0.499   0.35
 3.02 Intr -  94098  94011   88  0  1   79   -4    94 0.895  -1.16
 3.01 Init -  94484  94311  174  2  0   63   75   158 0.676   9.35
 3.00 Prom -  95001  94962   40                              -6.96

 4.00 Prom +  95057  95096   40                             -15.08
 4.01 Init +  95419  95559  141  0  0   93   40    73 0.621   3.22
 4.02 Intr +  99992 100271  280  1  1  122   94   503 0.928  51.35
 4.03 Term + 104694 105223  530  1  2  116   53  1142 0.952 107.92
 4.04 PlyA + 107168 107173    6                               1.05

 5.00 Prom + 117168 117207   40                              -0.66
 5.01 Init + 142045 142135   91  0  1   92  113    63 0.816   9.85
 5.02 Term + 147150 147226   77  1  2   46   44   108 0.537   0.20
 5.03 PlyA + 148499 148504    6                               1.05

 6.10 PlyA - 150390 150385    6                               1.05
 6.09 Term - 160634 160488  147  2  0  108   47   275 0.999  23.30
 6.08 Intr - 164297 164075  223  1  1  110   75   322 0.644  31.23
 6.07 Intr - 170456 170354  103  0  1  100   98   115 0.402  12.93
 6.06 Intr - 175724 175626   99  0  0   94   68    23 0.143   0.98
 6.05 Intr - 180850 180767   84  2  0   60   28   118 0.074   2.79
 6.04 Intr - 188272 188146  127  1  1   92   68    27 0.322   1.35
 6.03 Intr - 196498 196393  106  0  1  110   63    16 0.013   1.52
 6.02 Intr - 201448 201400   49  2  1   87   77    28 0.042  -0.66
 6.01 Init - 204949 204817  133  1  1   78   47    69 0.324   2.10
 6.00 Prom - 205073 205034   40                              -0.26


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:35446810_35652029|GENSCAN_predicted_peptide_1|112_aa
XSWSHLPNHMPDPPLLLNAPQNIIVFVIHSLSTHLKFRSAPGRASDPEDAMGNETDKGPG
SPGACIQPGVGEDSDEETEGTEGAGGGSRSFPGALMGWTRLDTKVFIGKRFL

>gi568815576f:35446810_35652029|GENSCAN_predicted_CDS_1|339_bp
nncagctggagtcatcttcccaaccacatgccagaccctccactcctgctaaacgcccca
caaaacatcatcgtattcgtcattcactcactcagcacacatctgaagttccgcagtgcc
ccaggccgggcatcagaccccgaggatgcaatggggaatgagacagacaagggtcctggc
tctccaggagcatgcatccagcctggtgtgggagaagacagcgatgaggagacagaggga
actgagggagcaggcgggggcagtaggagctttccaggggctctgatgggatggacaaga
ctggacaccaaggtcttcatcggcaagaggttcctgtga

>gi568815576f:35446810_35652029|GENSCAN_predicted_peptide_2|478_aa
MLLASSLLLAPQLRAAGSGAWYYVVSPIHRKAFEHRDACPPIFVSLKTSLKAAVFMRLSV
GGWRSTLKKQPISAGDGLGESPQLPLSWDILGVNEGRKRQLQLEACGSELRPPPHSLRWL
PRSRITSSPLPFITHLCCREARVLPIFSEQSGSLEQPQDVLPAPDVPPAPDVSPAPDVLP
APDVLPAPDVSPAPDVLPAPDVSPAPDVLPAPDVLPAPDVSPAPDVLPAPDVSPAPDVLP
APDVSPAPDVLPAPDVLPAPDVSPAPDVSPAPDVSPAPDVLPAPDVFPAPDVLPAPEVLP
VSSVLLVLVCSLPQTFAFRKLVLFLSLCLCGESVPPLCQGDLMVKLPTHTPAIVGCPELT
LGFPCLVLLFTTIPAENEVPPIPPLPKSKEGVSRLKSDIFYSVLGPGNTKKMDTDTGGQG
GTSWPSEALGLREDTGSAPQGPCTDRCESMYQNLLSQNTQGFGDQGPRVMSPDLRLLL

>gi568815576f:35446810_35652029|GENSCAN_predicted_CDS_2|1437_bp
atgctcttggcctcaagccttctcctcgctccccagctcagagctgcagggtcaggagcc
tggtattatgtcgtttctcccatacatcggaaggcatttgagcacagagatgcctgtccc
cccattttcgtctccttgaaaacttcacttaaggctgctgtgttcatgaggctttctgtg
ggtggatggaggtcaaccttgaagaagcagccgatttcagctggagacggccttggcgag
agcccccagctgcccttgagttgggacatcctgggggtgaatgagggtagaaaaaggcag
ctgcagttggaggcttgcggctcagagctaaggcctccaccccacagcctccgctggctc
cccaggtcgcgtatcacctcttctccattgccatttatcacccatctctgctgcagggag
gccagggtcctgccgattttttctgagcagtctgggagcctggagcagccccaggatgtg
ctccctgccccggatgtgccccctgccccggatgtgtcccctgccccggatgtgctccct
gccccggatgtgctccctgccccggatgtgtcccctgccccggatgtgctccctgccccg
gatgtgtcccctgccccggatgtgctccctgccccggatgtgctccctgccccggatgtg
tcccctgccccggatgtgctccctgccccggatgtgtcccctgccccggatgtgctccct
gccccggatgtgtcccctgccccggatgtgctccctgccccggatgtgctccctgccccg
gatgtgtcccctgccccggatgtgtcccctgccccagatgtgtcccctgccccggatgtg
ctccctgccccggatgtgttccctgccccggatgtgctccctgccccagaggtgctccct
gtctcaagtgtgctccttgtcctagtgtgctccctgccccagacttttgccttcagaaag
ctggtgctctttctttctctctgcttatgcggagaatctgtaccacctctttgccagggg
gacttaatggttaagctccccactcacacaccagccatcgtgggctgcccagaactcacc
ctgggctttccctgtcttgtgcttttgttcacaaccattcctgcagaaaatgaggtccct
cctattccacctcttcccaaatccaaggaaggtgtcagcaggctgaagtcagatatcttt
tactctgttctaggccctggaaatacaaagaagatggacacagacactggtggacaaggg
ggcacttcctggccttctgaagctttgggtctgagggaggacacaggcagtgctccccaa
gggccttgcacagaccgctgtgaaagcatgtaccagaatctgttgtcacaaaatacgcag
ggttttggagaccagggacctcgtgtcatgtctccggacctacggcttcttctgtaa

>gi568815576f:35446810_35652029|GENSCAN_predicted_peptide_3|320_aa
MGGLRGLGGARAGGGLRLAAAGPALPRAGGLLLSQVPGGLGTSDPGVPAWGSRAGGRELS
QRRRDGFFLPARRRQQLKEEQGALLCARRCPTVTRRAKRSLIPPKGLDCIPLSNVIITII
TITITIILIITIAFITIIITVIITIIITIITIITLIIIPVITIIIITITIITVIIIPIIT
IIIITIITIITVIIPIIAIVIITTITVIIFPIITIIIITITIITIITVIIIPIITIIIIT
VIITIITIIPIITIIIIITIIITTLTTITTIIIITITTIITIIITIITTIITITVSVIII
ATIIVVIIIISQAYGPFAPF

>gi568815576f:35446810_35652029|GENSCAN_predicted_CDS_3|963_bp
atgggtgggctccgagggctcggcggggcccgggcagggggcgggctccggctcgccgcc
gccggccctgccctgccccgagccgggggcctcctgctgagccaggtgcccggaggcttg
gggacgtccgatccgggggtccccgcctggggctctcgggctgggggcagagagctctcc
cagcgccggagggacggcttctttctccccgcgcggcgacgccagcagctgaaggaggag
cagggcgctctgctctgcgcgcgcagatgccccactgtcacccgcagggcgaagaggtcg
ctgatccctccgaaaggcttggactgcatccctctttctaatgtcatcatcaccatcatt
accatcactatcaccatcatcctcatcatcaccattgccttcatcaccataatcatcacc
gtcatcatcaccatcatcatcaccatcatcaccatcatcactctcatcatcatccccgtc
atcaccatcatcatcatcaccatcaccatcatcactgtgatcatcatccccatcatcacc
atcatcatcatcaccatcatcacaatcatcactgtcatcatccccatcatcgctatcgtc
atcatcaccaccatcactgtcatcatcttccccatcatcactatcatcatcatcaccatc
accatcatcaccatcatcactgtcatcatcatccccatcatcaccatcatcatcatcact
gtcatcatcaccatcatcaccatcattcccatcatcaccatcatcatcattatcaccatt
atcatcaccacccttaccaccatcaccaccatcatcatcatcaccatcaccaccatcatc
actatcattattaccatcatcaccaccatcatcaccatcaccgtcagcgtcatcatcata
gccaccatcattgttgtcatcatcatcatctctcaagcctatggaccttttgctcctttt
tag

>gi568815576f:35446810_35652029|GENSCAN_predicted_peptide_4|316_aa
MGSLQDLRLHSSPASPGCSRQPHDCQDKVPRRKEPSMCSGLLRVKSWPRAMMKTLSSGNC
TLSVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDFHRKVYNIRGDMYQLD
ILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRESFDEVKRLQKQILEVKSCLKNKTKEA
AELPMVICGNKNDHGELCRQVPTTEAELLVSGDENCAYFEVSAKKNTNVDEMFYVLFSMA
KLPHEMSPALHRKISVQYGDAFHPRPFCMRRVKEMDAYGMVSPFARRPSVNSDLKYIKAK
VLREGQARERDKCTIQ

>gi568815576f:35446810_35652029|GENSCAN_predicted_CDS_4|951_bp
atggggtccctgcaagacctgcgcctgcattccagtccagcctcaccaggctgctctagg
cagccccacgactgccaagataaagtgccacgaagaaaagaacccagcatgtgttcaggt
ttgctgcgggtcaagagctggccccgagccatgatgaagactttgtccagcgggaactgc
acgctcagtgtgcccgccaaaaactcataccgcatggtggtgctgggtgcctctcgggtg
ggcaagagctccatcgtgtctcgcttcctcaatggccgctttgaggaccagtacacaccc
accatcgaggacttccaccgtaaggtatacaacatccgcggcgacatgtaccagctcgac
atcctggatacctctggcaaccaccccttccccgccatgcgcaggctgtccatcctcaca
ggggatgtcttcatcctggtgttcagcctggataaccgggagtccttcgatgaggtcaag
cgccttcagaagcagatcctggaggtcaagtcctgcctgaagaacaagaccaaggaggcg
gcggagctgcccatggtcatctgtggcaacaagaacgaccacggcgagctgtgccgccag
gtgcccaccaccgaggccgagctgctggtgtcgggcgacgagaactgcgcctacttcgag
gtgtcggccaagaagaacaccaacgtggacgagatgttctacgtgctcttcagcatggcc
aagctgccacacgagatgagccccgccctgcatcgcaagatctccgtgcagtacggtgac
gccttccaccccaggcccttctgcatgcgccgcgtcaaggagatggacgcctatggcatg
gtctcgcccttcgcccgccgccccagcgtcaacagtgacctcaagtacatcaaggccaag
gtccttcgggaaggccaggcccgtgagagggacaagtgcaccatccagtga

>gi568815576f:35446810_35652029|GENSCAN_predicted_peptide_5|55_aa
MGKVRVNPEDKGGHSVGVQSQGAGEGCQKQASSLGKTNLSYVTTKGSRNSGIQTL

>gi568815576f:35446810_35652029|GENSCAN_predicted_CDS_5|168_bp
atgggcaaggtgagggtgaatcctgaagacaaaggtggccactcggtgggtgttcagagc
cagggagcaggtgaaggttgtcagaaacaagcttcctcacttggaaaaacaaatctgagc
tacgtgaccaccaagggctcccggaactctggcattcagaccctgtga

>gi568815576f:35446810_35652029|GENSCAN_predicted_peptide_6|356_aa
MEYYAAIKKDEFVSFVGTWMKLETIILSKLSQGQKTKHRMFSLLGWTYMGYENSSCGLEL
WWAFSITERREFQVYYNSCPSSSWIGDARAFSPPDPTGLYPIYSQDTQTFRLWLNYNTDF
PGSPACKWQAMELLSPQSPFRVDRGEHLPFLVKGARYTLVPAGQEGALAAWLEALRGQLG
RRGAVVSMMDAEGLERSSPDCAMGLSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHP
ETLEKFDKFKHLKSEDEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPLAQSHATKH
KIPVKYLEFISECIIQVLQSKHPGDFGADAQGAMNKALELFRKDMASNYKELGFQG

>gi568815576f:35446810_35652029|GENSCAN_predicted_CDS_6|1071_bp
atggaatactatgcagccataaaaaaggatgagttcgtgtcctttgtagggacatggatg
aagctggaaaccatcattctcagcaaactatcgcaaggacaaaaaaccaaacaccgcatg
ttctcactcctaggatggacctatatggggtatgaaaatagctcctgtggcttagagcta
tggtgggctttttccataacagaaagaagagaatttcaagtctattacaattcatgtcct
tctagttcctggattggagatgcaagagcattttccccaccagatccaactgggctttac
cccatctactcccaggatactcagaccttcagactctggctgaattataacactgacttt
cctgggtctccagcttgcaaatggcaggctatggaacttctcagcccacaatcacccttc
agggtagaccgaggagagcacctccccttcctggtgaagggagcccgatacacgctggtg
ccggctggccaagaaggagccctggccgcttggctggaggctctgcgaggacagctgggg
agaaggggagctgtggtcagtatgatggatgctgaggggctggagaggagcagccctgac
tgcgccatggggctcagcgacggggaatggcagttggtgctgaacgtctgggggaaggtg
gaggctgacatcccaggccatgggcaggaagtcctcatcaggctctttaagggtcaccca
gagactctggagaagtttgacaagttcaagcacctgaagtcagaggacgagatgaaggcg
tctgaggacttaaagaagcatggtgccaccgtgctcaccgccctgggtggcatccttaag
aagaaggggcatcatgaggcagagattaagcccctggcacagtcgcatgccaccaagcac
aagatccccgtgaagtacctggagttcatctcggaatgcatcatccaggttctgcagagc
aagcatcccggggactttggtgctgatgcccagggggccatgaacaaggccctggagctg
ttccggaaggacatggcctccaactacaaggagctgggcttccagggctag