GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:02:26

Sequence gi568815591r:129918667_130151366 : 232700 bp : 44.37% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  30260  30299   40                              -0.96
 1.01 Init +  33502  33683  182  0  2   68   35   150 0.469   6.36
 1.02 Intr +  39866  39887   22  2  1  142   96    -5 0.497   3.25
 1.03 Intr +  45016  45116  101  0  2   37  103    65 0.250   1.81
 1.04 Intr +  75725  75749   25  2  1   71   96    53 0.017   2.43
 1.05 Term +  82849  82950  102  0  0   96   48    23 0.024  -2.62
 1.06 PlyA +  85297  85302    6                               1.05

 2.08 PlyA -  85314  85309    6                               1.05
 2.07 Term -  90274  89981  294  1  0    6   35   172 0.067  -0.99
 2.06 Intr - 103859 103653  207  2  0  119   81    98 0.993  11.47
 2.05 Intr - 105057 104845  213  0  0   93  109   128 0.991  14.31
 2.04 Intr - 110402 110236  167  0  2   81  101    20 0.188   2.28
 2.03 Intr - 122419 122285  135  2  0   41   95   109 0.386   7.44
 2.02 Intr - 129318 129284   35  2  2   44   44    33 0.090  -7.63
 2.01 Init - 132700 132555  146  1  2  104   77   105 0.555  10.60
 2.00 Prom - 137562 137523   40                              -2.26

 3.00 Prom + 141013 141052   40                              -4.16
 3.01 Init + 141917 141930   14  1  2  114   34     5 0.237  -2.49
 3.02 Intr + 151750 151834   85  1  1  113  115    40 0.694   9.02
 3.03 Intr + 151993 152143  151  0  1   30  109    95 0.488   5.54
 3.04 Intr + 186403 186543  141  2  0   49   67    96 0.037   3.92
 3.05 Intr + 197779 198000  222  2  0   77   94   137 0.810  11.30
 3.06 Intr + 202083 202237  155  1  2   74   81    50 0.666   2.69
 3.07 Intr + 203388 203536  149  2  2   87   78   144 0.538  12.33
 3.08 Intr + 205785 205869   85  0  1   83   71    33 0.309   0.92
 3.09 Term + 211871 212080  210  1  0   63   55    81 0.097  -0.41
 3.10 PlyA + 217019 217024    6                               1.05

 4.03 PlyA - 217870 217865    6                               1.05
 4.02 Term - 222138 221939  200  1  2   85   36   130 0.736   5.06
 4.01 Init - 229095 228975  121  0  1   96   63   108 0.559   9.45

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  82769  82817   49  1  1   87   94    51 0.822   6.72


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:129918667_130151366|GENSCAN_predicted_peptide_1|143_aa
MGSVVESEATGRAKRKKAVSGVQTSRRKVTGSGDTGRASSNAYFGVLRRKGELKRLSAPG
RAEPTLDQALYQGALLTTNQPGRTDVILLVAQMKNLTFKEVMLYALYVYQGKYSRYKYHI
DRYDAVCPLPANAGECVNKPTPG

>gi568815591r:129918667_130151366|GENSCAN_predicted_CDS_1|432_bp
atgggctcggtggtagagagtgaggcgactggtcgtgcaaaaagaaaaaaggccgtctcg
ggagtccaaacgtcgcggaggaaagtcacaggctctggggatacaggaagagcgagcagc
aacgcgtatttcggggtgctgcggagaaaaggcgagctgaaaaggctctcggcccctggg
agagctgagcccacccttgaccaggcactgtaccaaggtgcattacttacaaccaaccaa
cctggcaggacagatgttattctgcttgttgcacagatgaagaatcttacgttcaaagaa
gtcatgttatatgccctctatgtgtaccagggtaaatacagtagatataagtatcatatc
gatagatatgatgctgtatgtcccttacctgccaatgctggggagtgtgtaaacaagcca
acccctggctag

>gi568815591r:129918667_130151366|GENSCAN_predicted_peptide_2|398_aa
MAAPCEGQAFAVGVEKNWGAVVRSPEGTPQKIRQLIDEGIAPEEGGVDAKVHNLAADFHQ
SKPFELSPLVCAKYGWVTVECDMLKCSSCQAFLCASLQPAFDFDRFYTNIIFQFTFSTDR
FGMLPLDEPAILVSEFLDRFQSLCHLDLQLPSLRPEDLKTMAEKSPGPIVSRTRSWDSSS
PVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRSFF
DPTSQHRDWCPWVNITLGKESRENGGTEPDASAPAEPGWKAVLTILLAHKQSSQPAETDS
MIWLQTVKSLVGPDNSSETQSLLCGKQNVNRGLRVFGKSAPRIRDGPGSSFSLSSIPCYT
RSHSLCPTGPQGALGSLAKSQHCPGPCSRSTVTGLNSH

>gi568815591r:129918667_130151366|GENSCAN_predicted_CDS_2|1197_bp
atggcggcgccctgtgagggacaagcgtttgccgtaggggttgaaaagaattggggtgca
gtagttcgctccccagaagggaccccccagaaaatccggcagctgatagatgaggggatt
gccccggaagagggaggcgtggacgcgaaagttcacaacttggcagctgacttccatcag
agtaagccctttgagctgtctccactcgtctgtgcaaaatatggctgggtcacagtggaa
tgtgatatgctcaagtgctctagctgtcaagcttttctctgtgccagtttacaaccagct
tttgactttgacagattttacaccaatataatcttccaatttactttttccacagaccga
tttgggatgttgcccctggatgagcctgctattcttgttagtgaattcctagatcgtttt
caaagcctttgtcacttggacctccagcttccttccctaaggccggaggacttgaaaact
atggctgaaaagagccctggtcccattgtctctcgaactcggagctgggactcttccagt
cctgttgaccgtcctgagccagaggctgctagccccaccaccagaactcgcccagtgacc
cgaagcatgggaacaggagacacccctggcctggaggtaccatctagccctctgcggaaa
gccaagcgagctcgcctctgctcctccagcagttcggacacatcttcccgaagcttcttt
gatcccacctctcagcatagagactggtgcccttgggtgaatatcacacttggcaaagaa
agcagggagaatggtggaactgaaccagatgccagcgccccagcagagccaggctggaaa
gcagtgctgaccatcctcttggcgcacaaacagtctagccagccagctgaaacggactcc
atgatctggctccaaacagtgaagagcctggtggggcctgacaacagttcagagacgcag
agcctcctctgtgggaaacagaatgtgaaccgaggccttagagtgtttggaaaatcagct
ccacgaatcagagatggaccgggcagcagcttctccctctcctccatcccatgctacacc
cgtagccactctctgtgccccactggtcctcagggggccctgggctctcttgccaagtct
cagcactgcccaggcccatgcagccggtcaacagtgactgggctcaactcccactaa

>gi568815591r:129918667_130151366|GENSCAN_predicted_peptide_3|403_aa
MPGQLHSYGYHVSLRLPPPTKKTTDHWLPFTKAGWDRNRRRGGGAAGAGGGGSGAGGGSG
GSGGRGTGQLNRFVQLSGRPHLPGIATLKRLTVAIPSIGKDMEQQEFSHAALGYVKWYNH
FENILALPNEGHRPPPARSGHRCVADNTNLYVFGGYNPDYDESGGPDNEDYPLFRELWRY
HFATGVWHQMGTDGYMPRELASMSLVLHGNNLLVFGGTGIPFGESNGNDVHVCNVKYKRW
ALLSCRGKKPSRIYGQAMAIINGSLYVFGGTTGYIYSTDLHKLDLNTREWTQLKPNNLSC
DLPEERYRHEIAHDGQRIYILGGGTSWTAYSLNKAGCMYIHGGVVNIHENKRTGSLFKIW
LVVPSLLELAWEKLLAAFPNLANLSRTQLLHLGLTQGLIERLK

>gi568815591r:129918667_130151366|GENSCAN_predicted_CDS_3|1212_bp
atgcccggccagctccatagctatggttaccacgtttctctccgcctcccgccacctacc
aagaaaacgactgaccattggctgcctttcaccaaggcgggctgggacaggaaccgccgg
aggggaggaggcgccgccggcgctggtggcggaggtagcggggccggcgggggcagtggg
ggcagcgggggtcgggggactggccagctcaaccgcttcgtgcaactctccgggcggccg
cacctgccaggaattgctacattaaaaagactgacagtggcaataccaagtattggcaag
gatatggaacaacaggaattctcacatgctgcccttggatatgtaaagtggtacaaccat
tttgaaaacattttggctttaccaaacgaaggccacagacctccaccagcacgaagtgga
catcgttgtgtggcagataataccaacctatatgtgtttggaggttataacccagattat
gatgaatcgggagggcctgataatgaagactatcctctcttcagggaactctggaggtat
cattttgctacaggagtatggcaccagatgggcacagatggctacatgccccgggaattg
gcatctatgtcacttgtgctgcatggaaacaacctgttagtatttggaggtacgggcatc
ccatttggagagagcaacggcaatgacgtccatgtgtgtaatgtgaagtataagagatgg
gctttgctcagctgtcgggggaagaaacccagtcgtatatatggacaggctatggccatc
atcaatggctccctttatgtctttggaggtacaaccggctatatttacagcacagacctg
cacaagttagatctcaataccagagagtggacacaactgaaaccaaacaacctatcctgt
gatctaccagaagagagataccgacatgaaattgcacatgacgggcagaggatttacatc
ttgggaggtggtacttcctggacagcatattccttaaacaaggctggttgcatgtacatt
catggaggagtggtgaacatccatgaaaacaaacggactgggtcattgtttaagatctgg
ctggtggtacctagcctgctggaactggcatgggagaagctgcttgcggccttccctaac
cttgcaaacctctcccgaacacaacttctgcaccttggactcacacagggactcatcgaa
cgcttgaaatga

>gi568815591r:129918667_130151366|GENSCAN_predicted_peptide_4|106_aa
MAEAKLVERDGVEETACSPKGEKSTLGKAPCNGSEGWRQPAMCAAGGKSMASGRVAQRTG
PWGAARSTDRPGPWLHRPCAAAPNPESREARGDFTSPKALLKEFSQ

>gi568815591r:129918667_130151366|GENSCAN_predicted_CDS_4|321_bp
atggcggaggccaaactggtggaaagagatggtgttgaggagacagcctgctccccgaag
ggtgagaagagcaccctgggaaaagccccctgtaacggcagcgagggctggaggcagccg
gccatgtgcgctgcaggcggcaagtccatggccagcgggcgggtagcccagcgcaccggg
ccttggggagccgcccgcagcacggaccgccctggcccctggcttcaccgcccctgcgcg
gctgctcccaacccagaatcccgggaagccaggggtgacttcacgtccccgaaagccctt
ctgaaagaattttctcagtaa