GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:00:09

Sequence gi568815585f:36332622_36542662 : 210041 bp : 38.99% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -   3209   2400  810  2  0   92  115   536 0.766  51.45
 1.00 Prom -  17721  17682   40                              -4.65

 2.00 Prom +  24054  24093   40                              -4.55
 2.01 Init +  27698  27748   51  1  0   74   94    35 0.197   3.91
 2.02 Intr +  32879  32983  105  1  0   18   50   116 0.106   0.29
 2.03 Intr +  33109  33222  114  0  0  102   94    11 0.169   2.82
 2.04 Intr +  50467  50610  144  0  0  100   61    31 0.022   1.16
 2.05 Intr +  72473  72540   68  1  2   54   92    57 0.149  -0.52
 2.06 Term +  75532  75838  307  1  1   25   43   747 0.200  57.50
 2.07 PlyA +  76527  76532    6                               1.05

 3.00 Prom +  93385  93424   40                              -5.05
 3.01 Init +  94029  94106   78  2  0   62  101    39 0.732   3.71
 3.02 Intr +  97989  98083   95  2  2   30   75   109 0.550   1.64
 3.03 Term +  98216  98450  235  2  1   77   39   227 0.812  11.51
 3.04 PlyA +  98468  98473    6                              -1.95

 4.00 Prom +  98603  98642   40                              -9.45
 4.01 Init +  99560  99661  102  1  0  116   51    73 0.769   6.34
 4.02 Intr + 100412 100600  189  1  0   77   95   244 0.963  22.86
 4.03 Intr + 105008 105254  247  1  1   53   93   277 0.947  20.81
 4.04 Intr + 105446 105570  125  0  2   52  100    71 0.580   4.08
 4.05 Intr + 106023 106246  224  2  2   58   88   283 0.995  21.30
 4.06 Intr + 107358 107562  205  0  1   86   93   244 0.997  22.98
 4.07 Intr + 108497 108610  114  1  0   63   86    55 0.846   2.52
 4.08 Term + 110472 110582  111  2  0  129   47    62 0.739   3.78
 4.09 PlyA + 111892 111897    6                              -0.45

 5.05 PlyA - 112039 112034    6                               1.05
 5.04 Term - 114318 114206  113  1  2  117   39    41 0.535  -0.16
 5.03 Intr - 115350 115155  196  0  1  101   97    87 0.631   8.97
 5.02 Intr - 122550 122379  172  2  1   70   80    53 0.240   1.72
 5.01 Init - 134422 134304  119  1  2   64   39   122 0.546   4.62
 5.00 Prom - 136168 136129   40                              -3.65

 6.03 PlyA - 136925 136920    6                               1.05
 6.02 Term - 138746 137981  766  1  1    7   41   321 0.281  11.19
 6.01 Init - 140524 140409  116  1  2   58   44   127 0.157   5.03
 6.00 Prom - 154060 154021   40                              -3.65

 7.02 PlyA - 154825 154820    6                               1.05
 7.01 Sngl - 155839 154958  882  1  0   42   43   292 0.947  15.87
 7.00 Prom - 155998 155959   40                             -11.44

 8.04 PlyA - 156046 156041    6                              -0.45
 8.03 Term - 157357 156218 1140  1  0    0   42   500 0.468  27.55
 8.02 Intr - 157660 157444  217  0  1    8   98   165 0.353   7.08
 8.01 Init - 158860 158781   80  1  2   47   75    69 0.282   2.08
 8.00 Prom - 161012 160973   40                              -4.55

 9.04 PlyA - 161300 161295    6                               1.05
 9.03 Term - 185487 185390   98  1  2   76   47   146 0.698   6.45
 9.02 Intr - 186685 186547  139  1  1   48   50    69 0.009  -1.78
 9.01 Init - 207298 207245   54  1  0  103   70    70 0.553   8.04
 9.00 Prom - 207845 207806   40                              -2.15


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  24750  25020  271  0  1   55   38   198 0.813   5.47
S.002 Sngl +  90763  90927  165  0  0   46   41   172 0.822   2.73


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:36332622_36542662|GENSCAN_predicted_peptide_1|270_aa
MEQEPQNGEPAEIKIIREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISIS
SKESEHTGPGWESARQMQQKMKETLQNVRTRLEILEKGLATSLQNDLQEVPKLYPEFPPK
DMCEKLPEPQSFSSAPQHAEVNGNTSTPSAGAVAAPASLSLPSQSCPAEAPPAYTPQAAE
GHYTVSYGTDSGEFSSVGEEFYRNHSQPPPLETLGLDADELILIPNGVQIFFVNPAGEVS
APSYPGYLRIVRFLDNSLDTVLNRPPGFLQ

>gi568815585f:36332622_36542662|GENSCAN_predicted_CDS_1|810_bp
atggagcaagagccacaaaatggagaacctgctgaaattaagatcatcagagaagcatat
aagaaggcctttttatttgttaacaaaggtctgaatacagatgaattaggtcagaaggaa
gaagcaaagaactactataagcaaggaataggacacctgctcagagggatcagcatttca
tcaaaagagtctgaacacacaggtcctgggtgggaatctgctagacagatgcaacagaaa
atgaaagaaactctacagaatgtacgcaccaggctggaaattctagagaagggtcttgcc
acttctctgcagaatgatcttcaggaggtgcccaagttatatccagaatttccacctaaa
gacatgtgtgaaaaattaccagagcctcagtcttttagttcagctcctcagcatgctgaa
gtaaatggaaacacctcaactccaagtgcaggggcagttgctgcacctgcttctctgtct
ttaccatcacaaagttgtccagcagaagctcctcctgcttatactcctcaagctgctgaa
ggtcactacactgtatcctatggaacagattctggggagttttcatcagttggagaggag
ttttataggaatcattctcagccaccgcctcttgagaccttagggctggatgcagatgaa
ttgattttgataccaaatggagtacagattttttttgtaaatcctgcaggggaggttagt
gcaccttcgtatcctgggtaccttcgaattgtgaggtttttggataattctctcgatacg
gttctaaaccgtcctcccgggtttcttcag

>gi568815585f:36332622_36542662|GENSCAN_predicted_peptide_2|262_aa
MSNEISSSRMMNVRATLITRKAKSLFLDFFSYKPPIDTYPLLYGAQMKDIGHLQHLAQRL
QWNRRAVNICGMHGWTKDLSPHSRMPSMLEKQCCSKGRLSSIDSIYLDIIPSSSRIFSDD
TELLARDWCSHSWTTEFQACCNDSLATAYVHWRLWGSTISRVLSDKSVQKKKKEEKEKEG
KGKKKRKKKKRKKKKRKKKKRNKKEEEKKKKEEEEEVEEEEGEGEGEEEEEEEEEEEEEE
EEEEEEEEEEEEELKKQSSSFC

>gi568815585f:36332622_36542662|GENSCAN_predicted_CDS_2|789_bp
atgtcaaatgaaatcagcagttctagaatgatgaatgttagagctaccctaattactagg
aaagccaagtctctcttcctggatttcttctcctataaaccgcctattgatacctaccca
cttctctatggagcacagatgaaggatattggtcatctccagcatctagcacaacgtctg
caatggaacaggcgagctgtgaatatttgtggaatgcatgggtggactaaagacctatca
cctcactctagaatgcccagcatgttggagaaacagtgttgttcaaaagggagactttct
agtatagatagcatctatttagatatcattcctagcagcagcaggattttctctgatgat
acagagctgttagctagagattggtgtagtcactcatggaccactgagtttcaggcctgc
tgtaatgactccctggctactgcctatgttcactggaggctctggggctctacaatcagc
agggtgcttagtgataaatcagttcagaagaagaagaaggaggagaaggagaaggagggg
aaggggaagaagaagaggaagaagaagaagaggaagaaaaagaagaggaagaagaagaag
aggaataagaaggaggaggagaagaagaagaaagaagaggaagaagaggtagaagaagaa
gaaggagaaggagaaggagaggaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaggaagaagaagaagaagaattaaagaaacaaagctctagc
ttttgctga

>gi568815585f:36332622_36542662|GENSCAN_predicted_peptide_3|135_aa
MEYYSAIKKNEILSFATGWMELEIIMRLRLLAGLAVESQTELATESFSDPGNNNTVGRCY
QNSRVSFIFKGTGNLGCKRTAVSQGIEVCDKRIEMSFMLNKIRFCVPPSSSLDSPDAYQL
LNIYLNCKAFNRRFC

>gi568815585f:36332622_36542662|GENSCAN_predicted_CDS_3|408_bp
atggaatactattcagctataaaaaagaatgagatcctgtcatttgcaacaggatggatg
gaactggagatcattatgcgactcaggctcttggcaggacttgctgtagagtcccagacg
gagttagccactgagtccttcagcgacccaggaaataacaacactgttggcagatgttac
cagaattcccgtgtttccttcatattcaaaggcacaggaaatctggggtgcaagcggact
gctgtctctcaaggaatagaagtctgtgacaaacgtatagaaatgagtttcatgttgaac
aagatccgtttctgcgttcctccctcatccagccttgattctccagatgcttaccaactt
cttaatatttacctcaactgcaaggctttcaaccggcgcttttgttag

>gi568815585f:36332622_36542662|GENSCAN_predicted_peptide_4|438_aa
MAMRPRRAHACRGRHGNAPARSGGAADWPIQQTRQQPVESEAMHCSNPKSGVVLATVARG
PDACQILTRAPLGQDPPQRTVLGLLTANGQYRRTCGQGITRIRCYSGSENAFPPAGKKAL
PDCGVQEPPKQGFDIYMDELEQGDRDSCSVREGMAFEDVYEVDTGTLKSDLHFLLDFNTV
SPMLVDSSLLSQSEDISSLGTDVINVTEYAEEIYQYLREAEIRHRPKAHYMKKQPDITEG
MRTILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAMLLASKYEE
IYPPEVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLTVPTTNQFLLQYLRRQGVCVRTE
NLAKYVAELSLLEADPFLKYLPSLIAAAAFCLANYTVNKHFWVARHRLVKEGRDSVDRWV
KRFEYALPALASLYHPSQ

>gi568815585f:36332622_36542662|GENSCAN_predicted_CDS_4|1317_bp
atggcgatgcggccccggagagcgcacgcctgccgcggtcggcatggaaacgctcccgct
aggtccgggggcgccgctgattggccgattcaacagacgcggcagcagcccgtggagtct
gaagcaatgcactgcagcaaccccaagagtggagttgtgctggctacagtggcccgaggt
cccgatgcttgtcagatactcaccagagccccgctgggccaggatcccccgcagaggaca
gtgctagggctgctaactgcaaatgggcagtacaggaggacctgtggccaggggatcaca
agaatcaggtgttattctggatcagaaaatgccttccctccagctggaaagaaagcactc
cctgactgtggggtccaagagccccccaagcaagggtttgacatctacatggatgaacta
gagcagggggacagagacagctgctcggtcagagaggggatggcatttgaggatgtgtat
gaagtagacaccggcacactcaagtcagacctgcacttcctgctggatttcaacacagtt
tcccctatgctggtagattcatctctcctctcccagtctgaagatatatccagtcttggc
acagatgtgataaatgtgactgaatatgctgaagaaatttatcagtaccttagggaagct
gaaataaggcacagacccaaagcacactacatgaagaagcagccagacatcacggaaggc
atgcgcacgattctggtggactggctggtggaggttggggaagaatataaacttcgagca
gagaccctgtatctggctgtcaacttcctggacaggttcctttcatgtatgtctgttctg
agagggaaactgcagctcgtaggaacagcagctatgcttttggcttcgaaatatgaagag
atatatcctcctgaagtagacgagtttgtctatatcaccgatgatacatacacaaaacga
caactgttaaaaatggaacacttgcttctgaaagttctagcttttgatctgacagtacca
accaccaaccagtttctccttcagtacttgaggcgacaaggagtgtgcgtcaggactgag
aacctggctaagtacgtagcagagctgagtctacttgaagcagatccattcttgaaatat
cttccttcactgatagctgcagcagctttttgcctggcaaactatactgtgaacaagcac
ttttgggtagctcgccatagattagtaaaggaaggaagggacagcgtagacagatgggtg
aagagatttgaatatgcgctgcctgctctagcttcactctaccatcctagtcagtaa

>gi568815585f:36332622_36542662|GENSCAN_predicted_peptide_5|199_aa
MEPQKTQDRQSLLEEKLRAEDITLHDFKLYYKAVVAKTACSKQELHVGLSKATQLELNCD
FIQTLQENWAIIGTDNKYTSRRKDKRQKGVKQNKEAQHLTQTSIQCQFEARAAEHRKHPG
RTFLSCLGLTPSRAARRSKATHRHSPAACRCRAQASTLSFNVSLLPHYSGSLSTDHLVFQ
NSRSSPGITDEGHIKQFAA

>gi568815585f:36332622_36542662|GENSCAN_predicted_CDS_5|600_bp
atggaaccacaaaagactcaggacaggcaaagccttcttgaggaaaagctccgagctgaa
gacatcacattacatgacttcaaattatactacaaagctgtagtagccaaaacagcatgc
agcaagcaggagcttcatgtggggctgtcgaaagctacacagctggagctaaactgtgat
tttattcagactctgcaagagaattgggcaattataggcacagataataaatacacctcc
aggagaaaggataaaagacaaaagggggtcaaacaaaataaagaagcacagcacctgacc
cagacgtctatccaatgtcagtttgaggctagggcagcggagcacagaaagcatcctggt
cgtactttcctgtcatgcttgggtctaactccatcccgagctgctcgcagaagcaaggcg
acacataggcacagcccagcagcttgtaggtgcagagcccaagcttccactctgagcttc
aatgtaagccttctccctcattactctggctcactgagcactgaccatttagtttttcaa
aactcacgatcaagtccaggaatcactgatgaaggacatattaaacaatttgctgcctaa

>gi568815585f:36332622_36542662|GENSCAN_predicted_peptide_6|293_aa
MELKTMSQELADECTNFSSQFNQLEERVPVIEDQMNEMKEARAHSKASRRQEITKIREEL
KEIETQKTLQKINESRSWFFEKINKIDRLLARLIKKKREKNQIDAMKNNKGDITTNPTEI
QTTIKEYYKHLYANELENLEEMDKFLDAYTLPRLNQEEVEFLNRPITVSEIEVIINSLPT
KKSPGPDGFLAEFYQRYKEELVPFFLKPFQSREKEGILPNSFYEASIILIPKPGRDTTKK
KENFRPISLMNIDAKILSKIRQTESSSTSKSLSTMIKWASSLGCKAGSKYANQ

>gi568815585f:36332622_36542662|GENSCAN_predicted_CDS_6|882_bp
atggagctgaaaaccatgtcacaagaactagctgatgaatgcacaaacttcagtagccaa
ttcaatcaactggaagaaagggtaccagtgattgaagatcaaatgaatgaaatgaaagaa
gcaagagcacattcaaaagctagcagaaggcaagaaataactaagatcagagaagaactg
aaagagatagagacacaaaaaacccttcaaaaaatcaatgaatccaggagctggtttttt
gaaaagatcaacaaaattgatagactgctagcaagactaataaagaagaaaagagagaag
aatcaaatagatgcaatgaaaaataataagggggatatcaccaccaatcccacagaaata
caaactaccatcaaagaatactataaacacctctatgcaaatgaactagaaaatctagaa
gaaatggataaattcctggacgcatacactctcccaagactaaaccaggaagaagttgaa
ttcctgaatagaccaataacagtctctgaaattgaggtaataattaatagcctaccaacc
aaaaaaagtccaggaccagatggattcttagctgaattctaccagaggtacaaggaggaa
ctggtaccattctttctgaaaccattccaatctagagaaaaagagggaatcctccctaac
tcattttatgaggccagcatcatcctgataccaaagcctggcagagacacaacaaaaaaa
aaagagaatttcagaccaatatccctgatgaacatcgatgcaaaaatcctcagtaaaata
cggcaaactgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttca
tccctgggatgcaaggctggttcaaaatatgcaaatcaataa

>gi568815585f:36332622_36542662|GENSCAN_predicted_peptide_7|293_aa
MIISIDAEKAFDKIQQRFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLK
TGTRQGCPLSPLLFNVVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVS
AQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQLMSKLPFTIASKRIKYLGIQLT
RDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIMKMAILPKVIYRFNAIPIKLPM
TFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITLLDFKLYCKPTVTKTA

>gi568815585f:36332622_36542662|GENSCAN_predicted_CDS_7|882_bp
atgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaacgcttcatgcta
aaaactctcaataaattaggtattgatgggacatatctcaaaataataagagctatctat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
actggcacaagacagggatgccctctctcaccactcctattcaacgtagtgttggaagtt
ctggccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaa
gtcaaattgtccctgtttgcagatgacatgattgtatatctagaaaaccccattgtctca
gcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaat
gtacaaaaatcacaagcattcctatacaccaataacagacaaacagagagccaactcatg
agtaaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttaca
agggatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaataaaagag
gatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcatgaaa
atggccatactgcccaaggtaatttatagattcaatgccatccccatcaagttaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cacatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacttgac
ttcaaactatactgcaagcctacagtaaccaaaacagcatga

>gi568815585f:36332622_36542662|GENSCAN_predicted_peptide_8|478_aa
MNDQHVSPPRASTSVSYKGNGGDPLIYGVGVLITQILELAGNGTCDNKKTCIILHHLQLA
SCNNEDVNKLLGKVIITQVTVLPNIQAKMLPKKTESHLKIKGDKEGHYIMVKGSIQQEEL
TILNIYAPNTGAPRFIKQVLSDLQRDLDSHTIIMGDFNTPLSTLDRSTRQKVNKDTQELN
SALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSKIDHIVGSKALLSKCKRTEIITNCLSD
HSAIKLELRIKKLTQNRSTTWKLNNLLLNDYWVHNEMKAEIKMFFETNENKDTTYQNLWD
TFKAVCRGKFIALNAHKRKQERSEIDTLTSQLKELEKQEQTHSKASRGQEITKIRVELKE
IETQKTLQKINESRSWFFERINKIDRPLARLIKKKREKNKVDTIKNDKGDITTNPTETQT
TIREYYKHLYANKLENLQEMDKFLDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPT

>gi568815585f:36332622_36542662|GENSCAN_predicted_CDS_8|1437_bp
atgaatgaccagcatgtcagtcctccaagagcatcaactagtgtgagttacaaggggaat
ggaggggaccctttaatctatggtgttggagtgctgattactcagattctggagttggca
ggcaatgggacctgtgacaacaagaagacatgtatcatcctgcaccacctgcagctggcc
agttgcaataatgaagatgtcaacaagttgctgggtaaagtcattatcacacaggtgact
gtcttgcccaacatccaggccaagatgctgcccaagaagactgagagtcacctcaagatc
aaaggagacaaagaaggccattacataatggtaaagggatcaattcaacaagaagagcta
actatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagtcctg
agtgacctacaaagagacttagactcccacacaataataatgggagattttaacacccca
ctgtcaacattagacagatcaacgagacagaaagttaacaaggatacccaggaattgaac
tcagctctgcatcaagcggatctaatagacatctacaggactctccaccccaaatcaaca
gaatatacatttttttcagcaccacaccacacctattccaaaattgaccacatagttgga
agtaaagctctcctcagcaaatgtaaaagaacagaaattataacaaactgtctctcggac
cacagtgcaatcaaactagaactcaggattaagaaactcactcaaaaccgctcaactaca
tggaaactgaacaacctgctcctgaatgactactgggtacataacgaaatgaaggcagaa
ataaagatgttctttgaaaccaacgagaacaaagacacaacataccagaatctctgggac
acattcaaagcagtgtgtagagggaaatttatagcactaaatgcccacaagagaaagcag
gaaagatccgaaattgacaccctaacatcacaattaaaagaactagaaaagcaagagcaa
acacattcaaaagctagcagagggcaagaaataactaaaatcagagtagaactgaaggaa
atagagacacaaaaaacccttcaaaaaattaatgaatccaggagctggttttttgaaagg
atcaataaaattgatagaccgctagcaagactaataaagaagaaaagagagaagaataaa
gtagacacaataaaaaatgataaaggggatatcaccaccaatcccacagaaacacaaact
accatcagagaatactacaaacacctctacgcaaataaactagaaaatctacaagaaatg
gataaattcctcgacacatacactctcccaagactaaaccaggaagaagttgaatctctg
aatagaccaataacaggctctgaaattgtggcaataatcaatagcttaccaacttaa

>gi568815585f:36332622_36542662|GENSCAN_predicted_peptide_9|96_aa
MEEGKGEAGTFLTGWQNRWVHKGISDLEESKAMSTHANSLHSSKVRKCKLKMLGDSLTHK
EENGGPLLGTEDPVKNTIVPLIRGLVGRVPKPLVDA

>gi568815585f:36332622_36542662|GENSCAN_predicted_CDS_9|291_bp
atggaggaaggcaaaggagaagcaggcaccttcctcacagggtggcagaacagatgggtc
cacaagggaatttctgatctagaggaatccaaagcaatgtccacacatgcaaattctcta
cacagcagcaaagtcaggaaatgcaaactcaaaatgctgggagacagtttgactcacaaa
gaggaaaatgggggacccttgctaggcactgaggacccagtgaagaatacaatagtcccc
cttattcgagggctagtgggaagagttccaaaacccctggtggatgcctga