GENSCAN 1.0	Date run:  4-Nov-116	Time: 13:43:10

Sequence gi568815586f:68548725_68757184 : 208460 bp : 40.13% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -     65     60    6                               1.05
 1.01 Sngl -   5158   4271  888  1  0   60   43   948 0.989  83.32
 1.00 Prom -   5891   5852   40                              -7.85

 2.00 Prom +  10208  10247   40                              -6.85
 2.01 Init +  11814  12024  211  2  1   91   55   218 0.856  17.79
 2.02 Intr +  25790  25844   55  0  1   64   66    65 0.001  -0.98
 2.03 Intr +  41152  41326  175  1  1   54   97    91 0.028   5.62
 2.04 Intr +  47158  47263  106  0  1   78   36    53 0.272  -2.03
 2.05 Term +  47547  47860  314  1  2   78   36   163 0.582   4.28
 2.06 PlyA +  48525  48530    6                               1.05

 3.03 PlyA -  51066  51061    6                               1.05
 3.02 Term -  62386  62168  219  1  0   74   45   213 0.602  11.66
 3.01 Init -  69241  69239    3  1  0  108   81     0 0.290   1.35
 3.00 Prom -  71805  71766   40                              -6.05

 4.02 PlyA -  71873  71868    6                               1.05
 4.01 Sngl -  78616  78146  471  1  0   54   55   431 0.368  30.27
 4.00 Prom -  84268  84229   40                              -3.35

 5.03 PlyA -  84278  84273    6                               1.05
 5.02 Term -  94217  93790  428  0  2   -5   38   482 0.431  28.38
 5.01 Init -  94342  94285   58  1  1   49   -3    78 0.465  -3.68
 5.00 Prom -  95536  95497   40                              -6.75

 6.00 Prom +  97320  97359   40                              -7.65
 6.01 Init + 100001 100057   57  1  0   69  111     1 0.668   1.98
 6.02 Intr + 101676 101744   69  2  0   67   71    80 0.819   2.66
 6.03 Intr + 105388 105528  141  0  0  108   69   125 0.966  12.23
 6.04 Intr + 107582 107725  144  1  0   58   64    99 0.098   4.06
 6.05 Intr + 137803 138025  223  0  1   68   13   132 0.363   0.48
 6.06 Intr + 141907 142022  116  2  2   46   80    86 0.453   2.85
 6.07 Intr + 143244 143388  145  2  1   88   58   170 0.864  12.93
 6.08 Intr + 148095 148198  104  1  2   75  115    61 0.359   6.47
 6.09 Intr + 152002 152129  128  0  2  113   63    19 0.097   0.46
 6.10 Intr + 156921 157233  313  0  1   65   87   299 0.057  22.76
 6.11 Intr + 157361 157696  336  1  0   14   38   529 0.962  35.29
 6.12 Intr + 157818 157976  159  2  0  -11   64   219 0.932   8.86
 6.13 Intr + 160514 160585   72  1  0   64   80    51 0.586   0.58
 6.14 Intr + 161281 161369   89  0  2  111  111    37 0.940   6.15
 6.15 Intr + 165006 165084   79  0  1   80   27    68 0.862  -1.47
 6.16 Intr + 166903 167016  114  0  0  138   78    97 0.876  13.42
 6.17 Term + 170617 170760  144  0  0   95   36    78 0.446   0.23
 6.18 PlyA + 170939 170944    6                               1.05

 7.00 Prom + 171703 171742   40                              -5.55
 7.01 Init + 173105 173262  158  1  2   43   87   183 0.918  13.13
 7.02 Intr + 173380 173428   49  1  1   46   94    66 0.976   0.76
 7.03 Intr + 182386 182536  151  0  1   91   98    69 0.998   7.01
 7.04 Intr + 184728 184888  161  1  2   63   77   228 0.995  17.99
 7.05 Intr + 185984 186109  126  1  0   46  100    99 0.991   6.86
 7.06 Intr + 186507 186620  114  2  0  105   99    94 0.999  11.92
 7.07 Intr + 193089 193256  168  2  0   97  119    33 0.918   6.52
 7.08 Term + 193631 193738  108  1  0   75   29    64 0.886  -3.27
 7.09 PlyA + 193785 193790    6                               1.05

 8.00 Prom + 194254 194293   40                              -7.85
 8.01 Init + 197654 198055  402  1  0   88  105   411 0.916  37.47
 8.02 Intr + 199206 199320  115  2  1  103   19    50 0.533  -1.30
 8.03 Intr + 201758 201969  212  0  2    4   99   112 0.476   1.61
 8.04 Intr + 203308 203466  159  0  0   70  111   183 0.971  18.06
 8.05 Intr + 203539 203604   66  0  0   61  116    59 0.669   4.18

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  28955  29086  132  1  0   65  105   129 0.979  12.49
S.002 Term +  38686  38813  128  2  2   57   43   145 0.917   4.36
S.003 Term + 107582 107797  216  1  0   58   40   169 0.887   5.26
S.004 Init + 156910 157233  324  0  0   86   87   305 0.898  27.58


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:68548725_68757184|GENSCAN_predicted_peptide_1|295_aa
MSGALDVLQMREEDVLKFLAAGTHLGGTNLDFQMEQYIYERKSDGIYIINLKRTWEKLLL
AAHAIVAIENPADVSVISSRNTGQTAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAYSVGLMWWMLAR
EVLCMLGTISCEHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTA
IQPEVADWSEGVQVPSVPIQQFPTEDWSSQPAMEDWSAAPTAQATEWVGATTDWS

>gi568815586f:68548725_68757184|GENSCAN_predicted_CDS_1|888_bp
atgtccggagcccttgatgtcctgcaaatgagggaggaggatgtccttaagttccttgca
gcaggaacccacttaggtggcaccaatcttgacttccagatggaacagtacatctatgaa
aggaaaagtgatggcatctatatcataaatctgaagaggacctgggagaagcttctgctg
gcagctcatgctattgttgccattgaaaaccctgctgatgtcagtgttatatcctccagg
aatactggccagacggctgtgctgaagtttgctgctgccactggagccactccaattgct
gggcgcttcactcctggaaccttcactaaccagatccaggcagccttccgggagccacgg
cttcttgtggttactgaccccagggctgaccaccagcctctcacggaggcatcttatgtt
aacctacctaccattgcgctgtgtaacacagattctcctctgcgctatgtggacattgcc
atcccatgcaacaacaagggagcttactcagtgggtttgatgtggtggatgctggctcgg
gaagttctgtgcatgcttggcaccatttcctgtgaacacccatgggaggtcatgcctgat
ctgtacttctacagagatcctgaagagattgaaaaagaagagcaggctgctgctgaaaag
gcagtgaccaaggaggaatttcagggtgaatggactgctccagctcctgagttcactgct
attcagcctgaggttgcagactggtctgaaggtgtacaggtgccctctgtgcctattcag
caattccctactgaagactggagctctcagcctgccatggaagactggtctgcagctccc
actgctcaggccactgaatgggtaggagcaaccactgactggtcttaa

>gi568815586f:68548725_68757184|GENSCAN_predicted_peptide_2|286_aa
MDKSRGDIAADRWRTLQEEGSHLAGKLPAGKNAGGCLSWEEFPSPLQAQKPGNEWEAAGV
GQASQGKWPRNSWAPQVQAQMRWESMDPSPRGLGRKNGFHGPGPVPCCPEQPHSLGTLLP
ASWLLRLPQWLTGNQVKLTLLLQRVQAGPQSAPSLLRFQDLRPDLLTSLSPRALSTSDTH
LSSSSFFPLAERRLEKKEPPLHSIRDSSSSKVISERAAAPKVKLAPVIVTSGLFERRSMG
FEAKSTYIQNSFERRSMSFEAKSTYIQNSGSLHTQASSEPLSLPLK

>gi568815586f:68548725_68757184|GENSCAN_predicted_CDS_2|861_bp
atggacaagtctagaggcgatatagctgcagacaggtggaggacactgcaagaggaaggc
tcccatttagcaggaaaactgccagctgggaagaatgctggtggctgcctgagttgggaa
gaattcccaagccctctgcaagctcagaagccaggaaatgaatgggaagcagctggagtg
ggccaagcaagtcaaggcaaatggcccagaaattcatgggcccctcaagtccaagcacag
atgcgttgggaatctatggatcccagtcccagaggcctaggaaggaagaatggtttccat
gggccaggtccagtgccctgctgccctgagcagcctcacagcctcgggacactgcttcct
gcatcctggctgctccggctcccacagtggctaacagggaaccaggttaagctcacactg
ctgcttcagagggtgcaagccggtccacaatctgccccgtcactgctcaggtttcaggac
ctccggccagacctgctgacctctctgagccctagggcactgagcactagtgacactcac
ttgtcaagcagcagcttctttcccttagcagagcgcaggctagagaagaaagagccacca
ctacattccatcagagacagcagtagttccaaagtgatttcagaacgtgcagcagctcca
aaagtgaagctagctcctgtgatagtaacaagtggcttgtttgagagaaggagcatgggc
tttgaagccaaatcaacctatattcaaaatagctttgagagaaggagcatgagctttgaa
gccaaatcgacctatattcaaaattctggctctctgcacacacaggcaagttctgagcct
ctttctttgcctttaaaatag

>gi568815586f:68548725_68757184|GENSCAN_predicted_peptide_3|73_aa
MPAPGPARPPPRLPSAATHSLCEPLTLSPGPCSQRRPALPPGRYSRRHGGPAAAAPLRLV
YTPESGRGLAMSP

>gi568815586f:68548725_68757184|GENSCAN_predicted_CDS_3|222_bp
atgccggcgcccggccccgcgcggccgccgccgcggcttccctcagcggccacgcactca
ctctgcgaacctctcacgctgtcaccgggtccctgcagccagcgtcgccccgcgctcccc
ccgggtcgctactctaggcgccacggcggtcctgccgctgccgcgccgctccggctggtt
tacacgcctgaatctgggcgaggtttggcgatgtcgccttga

>gi568815586f:68548725_68757184|GENSCAN_predicted_peptide_4|156_aa
MGGPSVQWLQTAASLVVYAACVLYCMGCSKGPWRQSFQMDVHVSDLALPQCRFQTGMRGA
FGKPQGTVARVHTGQVIISIHTKLQNKEHVIEALRRAKFKFSGRQKIHISKKWGFTKFNA
NEFEDMVTEKRLIPDGCRVKYISNRGPVDKWRALHS

>gi568815586f:68548725_68757184|GENSCAN_predicted_CDS_4|471_bp
atgggggggcccagtgtgcaatggctgcaaacagcagcttccttggtagtgtatgcagcc
tgtgtgttgtattgtatgggttgctctaagggaccctggagacagtcctttcagatggat
gttcatgtttctgaccttgcactaccccagtgtaggttccaaacaggcatgcgaggtgcc
tttgggaagccccagggcactgtggccagggttcacactggccaagttatcatctccatt
cacaccaagctgcagaacaaggagcatgtgattgaggccctgcgcagggccaagttcaag
ttttctggccgccagaagatccacatctcaaagaagtggggcttcaccaagttcaatgcc
aatgagtttgaagacatggtgactgagaagcggctcatcccagatggctgtcgggtcaag
tacatttccaatcgtggccctgtggacaagtggcgggccctgcactcatga

>gi568815586f:68548725_68757184|GENSCAN_predicted_peptide_5|161_aa
MNNLQEVKGGCSGPWAARVEIIPQNQKAIASFLKSWNETLTSRLAALPENPPVIDWAYYK
ANVAKAGLVDDFKKFNALKVPVPEDKYTAQVDAEEKDVKSCAEWVSLSKARIVEYEKQME
KMKNLIPFDQMTTEDLNEAFPETKLDEKKYPYWPHQLIENL

>gi568815586f:68548725_68757184|GENSCAN_predicted_CDS_5|486_bp
atgaacaaccttcaagaagttaaaggcggctgcagtggaccgtgggcagccagggtcgag
atcataccccagaaccaaaaggccattgctagtttcctgaaatcctggaatgagaccctc
acctccaggttggctgctttacctgagaatccaccggttatcgactgggcttactacaag
gccaacgtggccaaggccggtttggtggatgactttaagaagtttaatgccctgaaggtt
cccgtgccagaggataaatatactgcgcaggtggatgccgaagaaaaagatgtgaaatct
tgtgctgagtgggtgtctctctcaaaggccaggattgtagaatatgagaaacagatggag
aagatgaagaacttaattccatttgatcagatgaccactgaggacttgaacgaagctttc
ccagaaaccaaattagacgagaaaaagtatccttattggcctcaccaactaatcgagaat
ttataa

>gi568815586f:68548725_68757184|GENSCAN_predicted_peptide_6|810_aa
MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKEQFTAMRDLYMKNGQGFA
LVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWN
NCAFLESSAKSKINVNEERTPSKEQIAVMENSCKNCRGLQNKGLSVGREIEIPEVWGRAH
ASEFQEQALSDREYQEMTSHFSRLSTYFILPITPTSRSLLRQPDISCILGTGGKSPRLTQ
SSGFFGNLSMVTNLDDSNWAAAFSSQRSGLFTNTEPHSITEDVTISAVMLREDDPGEAAS
MSMFSDFLQSFLKHSSSTVFDLVEEYENICGSQVNILSKIVSRATPGLQKFSKTASMLWL
LQQEMVTWRLLASLYRVTQKSFKVSNSGPRAFSSHSYMCGPSACISSSSFSRMGSSSFRG
SLGGDFGRASGRGGITPVTVNQSLLSPLNLEVDPNIQAVCTQVKEQIKTLNNKFASFIDK
LYTLGQEKLKLEVELDNMQGLVEDFKNKYEDDIKKHTEMENEFVLIKKDMDEAYKNKVEL
ESHLEGLTEEISFLRQLYEEEIRELQSQISDTSVVLSIDNSRSLDMNSIIAETEISKMNR
NISRLQDEIEGLKGQRASLEAAIADAEQHGELAVKDANTKLSKLEAVNASEKTVVEALFQ
RDSLVRQSQLVVDWLESIAKDEIGEFSDNIEFYAKSVYWENTLHTLKQRQLTSYVGSVRP
LVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMTEEAQRLCKRCGQAWRAATL
EGWKLYHDPNVNGGILVDFILTVEDKGISL

>gi568815586f:68548725_68757184|GENSCAN_predicted_CDS_6|2433_bp
atgcgtgagtataagctagtcgttcttggctcaggaggcgttggaaagtctgctttgact
gtacaatttgttcaaggaatttttgtagaaaaatacgatcctacgatagaagattcttat
agaaaggagcaatttacagcaatgagggatttatacatgaaaaatggacaaggatttgca
ttagtttattccatcacagcacagtccacatttaacgatttacaagacctgagagaacag
attcttcgagttaaagacactgatgatgttccaatgattcttgttggtaataagtgtgac
ttggaagatgaaagagttgtagggaaggaacaaggtcaaaatctagcaagacaatggaac
aactgtgcattcttagaatcttctgcaaaatcaaaaataaatgttaatgaggaaagaaca
ccaagtaaagaacaaatagcagttatggaaaatagttgcaaaaactgcagggggctacag
aacaaaggactgagtgtaggcagagagatagagatccccgaggtgtggggcagagcccac
gcatctgaattccaagaacaggcgctttctgacagagaataccaggaaatgacttcacat
ttttccagactatcaacatacttcattcttcccattaccccaacaagccgaagcttacta
aggcagccagatatttcctgcattcttggaacaggagggaagtcgccccgacttacgcag
tcttcagggttctttggaaatctctccatggttactaatctggatgacagtaactgggca
gctgcattttcatcacagcgttccgggctgttcacaaacacagagccccacagtataaca
gaagatgtaactatcagtgctgttatgttacgtgaggatgatcctggagaagctgcatcc
atgagtatgttttctgatttcctgcagtcttttctgaagcactcttcgagtacagttttt
gatcttgtggaagagtatgaaaacatctgtggtagtcaggtgaatatactgagtaaaata
gtgagtcgagcaacacctggacttcaaaaattttcaaaaacagccagtatgctctggctt
cttcaacaggagatggtcacatggaggctgctggcttctttgtatagagtgacccagaag
tccttcaaggtgtccaactctggcccaagggccttcagtagccattcctacatgtgtggg
cccagtgcctgcatcagctcctcgagcttctcccgaatgggcagcagcagtttccggggt
agcctgggtggagactttggcagggccagtggtaggggaggcatcaccccagtcacggtc
aaccagagcctgctgagcccccttaacctggaggtggaccccaacatccaagctgtgtgc
acccaggtgaaggagcagatcaagaccctcaacaacaagtttgcctccttcattgacaag
ctgtacactctgggccaagagaagctgaagctggaggtggaacttgataacatgcagggg
ctggtggaggacttcaagaacaagtacgaggatgatatcaaaaagcatacagagatggag
aatgaatttgtcctcatcaagaaggatatggatgaagcttacaagaacaaggtagagctg
gagtctcacctggaagggcttactgaagagatcagcttcctcaggcaactgtatgaagag
gagatccgggagctgcagtcccagatctcggacacatctgtggtgctgtccattgacaac
agtcgctccctggacatgaacagcatcatcgctgagactgagatctccaagatgaacagg
aacatcagtcggctccaggatgagattgagggcctcaaaggccagagggcttccctggag
gccgccatcgcagatgctgagcagcatggggagctggcagttaaggatgccaacaccaag
ctgtccaagctggaggctgttaatgccagtgaaaaaacagttgtggaagcgttatttcag
agggattcacttgttcgacaaagtcagctggtggtagattggttagagagtattgccaaa
gatgaaattggagaattttctgataatattgagttttatgcaaaatcagtatattgggaa
aatactctgcataccttaaaacaacggcagctgacttcttacgttggaagtgttcgtccg
cttgtcactgaattggaccctgatgctcccataagacagaaaatgccccttgatgatctg
gatagagaagatgaagttagattactcaaatatctctttactctaatccgtgctggaatg
acagaagaggcacaacgactctgtaaacgctgtggtcaagcatggagagctgcaacactt
gaaggctggaaactgtaccatgaccctaatgttaatggaggtattttagtagattttatt
ctgacagttgaggacaaaggcatttcgctctaa

>gi568815586f:68548725_68757184|GENSCAN_predicted_peptide_7|344_aa
MGKKLLPVCDTWEDTVWAYFRVMVDSLVEQEIQTSVATLDETEELPREYLGANWTLEKVF
EELQATDKKLLIREKHTNLIAFYTCHLPQDLAVAQYALFLESVTEFEQRHHCLELAKEAA
SKKHEAAKEVFVKIPQDSIAEIYNQCEEQGMESPLPAEDDNAIREHLCIRAYLEAHETFN
EWFKHMNSVPQKPALIPQPTFTEKVAHEHKEKKYEMDFGIWKGHLDALTADVKEKMYNVL
LFVDGGWMVDVREDAKEDHERTHQMVLLRKLCLPMLCFLLHTILHSTGQYQECLQLADMV
SSERHKLYLVFSKEELRKLLQKLRESSLMLLDQGLDPLGYEIQL

>gi568815586f:68548725_68757184|GENSCAN_predicted_CDS_7|1035_bp
atggggaaaaagctgcttcctgtctgtgacacctgggaagacacagtttgggcctacttc
cgggtgatggtggacagtctggtagaacaggagatccagacatcagtagcaactctggat
gaaactgaagaactccctagagaatatctgggagcaaactggacgttagaaaaggttttt
gaggaacttcaagctactgacaaaaagcttttaataagagagaaacatacaaatcttata
gcattttatacctgtcatttgcctcaagacctagctgttgcccagtatgcattatttttg
gaaagtgttacagaatttgaacagcgccaccattgcctggagttggctaaagaagcagca
tcaaaaaagcacgaagctgcaaaagaagtatttgtgaaaattcctcaggattctatagca
gaaatctataatcagtgcgaggaacaaggaatggaaagtccacttcctgctgaagatgat
aatgctatccgagaacatttgtgcatcagagcttatttggaagcccatgaaacctttaat
gagtggtttaagcatatgaattcagttccacaaaaacctgctttgatacctcaaccaact
tttactgagaaagtggctcatgaacacaaagaaaagaaatatgaaatggattttggtatt
tggaaagggcatttggatgccctaactgctgatgtgaaggagaaaatgtataacgtcttg
ttgtttgttgatggagggtggatggtggatgttagagaggatgccaaagaagaccatgaa
agaacacatcaaatggtcttactgagaaagctttgtctgccaatgttgtgttttctgctt
catacgatattgcacagtactggtcagtatcaggaatgcctacagttagcagatatggta
tcctctgagcgccacaaactgtacctggtattttctaaggaagagctaaggaagttgctg
cagaagctcagagagtcctctctaatgctcctagaccagggacttgacccattagggtat
gaaattcagttatag

>gi568815586f:68548725_68757184|GENSCAN_predicted_peptide_8|318_aa
MALLVDRVRGHWRIAAGLLFNLLVSICIVFLNKWIYVYHGFPNMSLTLVHFVVTWLGLYI
CQKLDIFAPKSLPPSRLLLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTF
CYQKTFSTRIQLTLIPITLGVILNSYYDVKFNFLGMVFAALGVLVTSLYQVVGSAKRARR
KGHRESGHVHGDHSALRRALEGWWQEPGCAALRDSGGLRAPAVPGSPVAKTRGCLKRLQK
ERQWVGAKQHELQVNSMQLLYYQAPMSSAMLLVAVPFFEPVFGEGGIFGPWSVSALFSEH
YVRSILTFIVIITIKGGK

>gi568815586f:68548725_68757184|GENSCAN_predicted_CDS_8|954_bp
atggcattgctggtggaccgagtgcggggccactggcgaatcgccgccgggctcctgttc
aacctgctggtgtccatctgcattgtgttcctcaacaaatggatttatgtgtaccacggc
ttccccaacatgagcctgaccctggtgcacttcgtggtcacctggctgggcttgtatatc
tgccagaagctggacatctttgcccccaaaagtctgccgccctccaggctcctcctcctg
gccctcagcttctgtggctttgtggtcttcactaacctttctctgcagaacaacaccata
ggcacctatcagctggccaaggccatgaccacgccggtgatcatagccatccagaccttc
tgctaccagaaaaccttctccaccagaatccagctcacgctgattcctataactttaggt
gtaatcctaaattcttattacgatgtgaagtttaatttccttggaatggtgtttgctgct
cttggtgttttagttacatccctttatcaagtggttggttctgcaaagagggctcgcagg
aagggccacagggagtctggacatgtccatggagatcatagtgcccttaggagagcatta
gaggggtggtggcaggagccaggctgtgctgcattgagggacagtggaggcctgagagcc
cctgctgttccaggcagtcctgtggcgaagacacgcggctgcctgaagaggctgcaaaag
gaaaggcagtgggtaggagccaaacagcatgaattacaagtgaactcaatgcagctgctg
tactaccaggctccgatgtcatctgccatgttgctggttgctgtgcccttctttgagcca
gtgtttggagaaggaggaatatttggtccctggtcagtttctgctttgttttcagagcac
tatgtccgatccattctcacatttatcgtcataatcaccataaaaggaggtaag