Result of FASTA (omim) for pF1KB8615
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8615, 488 aa
  1>>>pF1KB8615 488 - 488 aa - 488 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.5209+/-0.000404; mu= 4.2616+/- 0.025
 mean_var=171.4826+/-34.011, 0's: 0 Z-trim(118.5): 25  B-trim: 1126 in 1/54
 Lambda= 0.097941
 statistics sampled from 31474 (31500) to 31474 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.716), E-opt: 0.2 (0.369), width:  16
 Scan time:  8.560

The best scores are:                                      opt bits E(85289)
NP_001093894 (OMIM: 613817) SPATS2-like protein is ( 489) 3186 462.3 1.4e-129
XP_016859274 (OMIM: 613817) PREDICTED: SPATS2-like ( 489) 3186 462.3 1.4e-129
XP_016859276 (OMIM: 613817) PREDICTED: SPATS2-like ( 489) 3186 462.3 1.4e-129
XP_016859275 (OMIM: 613817) PREDICTED: SPATS2-like ( 489) 3186 462.3 1.4e-129
XP_005246516 (OMIM: 613817) PREDICTED: SPATS2-like ( 489) 3186 462.3 1.4e-129
XP_016859273 (OMIM: 613817) PREDICTED: SPATS2-like ( 519) 3186 462.3 1.5e-129
NP_001269672 (OMIM: 613817) SPATS2-like protein is ( 498) 2237 328.2 3.4e-89
NP_056350 (OMIM: 613817) SPATS2-like protein isofo ( 558) 2237 328.2 3.7e-89
XP_005246514 (OMIM: 613817) PREDICTED: SPATS2-like ( 558) 2237 328.2 3.7e-89
XP_005246513 (OMIM: 613817) PREDICTED: SPATS2-like ( 558) 2237 328.2 3.7e-89
XP_011509241 (OMIM: 613817) PREDICTED: SPATS2-like ( 558) 2237 328.2 3.7e-89
NP_001269664 (OMIM: 613817) SPATS2-like protein is ( 558) 2237 328.2 3.7e-89
XP_005246515 (OMIM: 613817) PREDICTED: SPATS2-like ( 558) 2237 328.2 3.7e-89
NP_001093893 (OMIM: 613817) SPATS2-like protein is ( 558) 2237 328.2 3.7e-89
NP_001093892 (OMIM: 613817) SPATS2-like protein is ( 558) 2237 328.2 3.7e-89
XP_016859272 (OMIM: 613817) PREDICTED: SPATS2-like ( 588) 2237 328.2 3.9e-89
XP_011509240 (OMIM: 613817) PREDICTED: SPATS2-like ( 588) 2237 328.2 3.9e-89
NP_001269673 (OMIM: 613817) SPATS2-like protein is ( 588) 2237 328.2 3.9e-89
NP_001280215 (OMIM: 611667) spermatogenesis-associ ( 545)  777 121.9 4.6e-27
NP_075559 (OMIM: 611667) spermatogenesis-associate ( 545)  777 121.9 4.6e-27
NP_001280214 (OMIM: 611667) spermatogenesis-associ ( 545)  777 121.9 4.6e-27
XP_011536993 (OMIM: 611667) PREDICTED: spermatogen ( 545)  777 121.9 4.6e-27
XP_011536992 (OMIM: 611667) PREDICTED: spermatogen ( 545)  777 121.9 4.6e-27
XP_016875329 (OMIM: 611667) PREDICTED: spermatogen ( 455)  723 114.2 7.8e-25


>>NP_001093894 (OMIM: 613817) SPATS2-like protein isofor  (489 aa)
 initn: 2799 init1: 2799 opt: 3186  Z-score: 2447.2  bits: 462.3 E(85289): 1.4e-129
Smith-Waterman score: 3186; 99.8% identity (99.8% similar) in 489 aa overlap (1-488:1-489)

               10        20        30        40        50        60
pF1KB8 MAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWN
               10        20        30        40        50        60

                70        80        90       100       110         
pF1KB8 MTGKK-NNKRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDS
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTGKKKNNKRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDS
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB8 ANEKPALIPREKKISILEEPSKALRGVTGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANEKPALIPREKKISILEEPSKALRGVTGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSS
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB8 VKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAEM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAEM
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB8 QLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCSS
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB8 LLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQNG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQNG
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB8 SSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAKN
              370       380       390       400       410       420

     420       430       440       450       460       470         
pF1KB8 QEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAVL
              430       440       450       460       470       480

     480        
pF1KB8 SVPAVTLVA
       :::::::::
NP_001 SVPAVTLVA
                

>>XP_016859274 (OMIM: 613817) PREDICTED: SPATS2-like pro  (489 aa)
 initn: 2799 init1: 2799 opt: 3186  Z-score: 2447.2  bits: 462.3 E(85289): 1.4e-129
Smith-Waterman score: 3186; 99.8% identity (99.8% similar) in 489 aa overlap (1-488:1-489)

               10        20        30        40        50        60
pF1KB8 MAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWN
               10        20        30        40        50        60

                70        80        90       100       110         
pF1KB8 MTGKK-NNKRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDS
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTGKKKNNKRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDS
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB8 ANEKPALIPREKKISILEEPSKALRGVTGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ANEKPALIPREKKISILEEPSKALRGVTGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSS
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB8 VKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAEM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAEM
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB8 QLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCSS
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB8 LLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQNG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQNG
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB8 SSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAKN
              370       380       390       400       410       420

     420       430       440       450       460       470         
pF1KB8 QEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAVL
              430       440       450       460       470       480

     480        
pF1KB8 SVPAVTLVA
       :::::::::
XP_016 SVPAVTLVA
                

>>XP_016859276 (OMIM: 613817) PREDICTED: SPATS2-like pro  (489 aa)
 initn: 2799 init1: 2799 opt: 3186  Z-score: 2447.2  bits: 462.3 E(85289): 1.4e-129
Smith-Waterman score: 3186; 99.8% identity (99.8% similar) in 489 aa overlap (1-488:1-489)

               10        20        30        40        50        60
pF1KB8 MAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWN
               10        20        30        40        50        60

                70        80        90       100       110         
pF1KB8 MTGKK-NNKRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDS
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTGKKKNNKRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDS
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB8 ANEKPALIPREKKISILEEPSKALRGVTGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ANEKPALIPREKKISILEEPSKALRGVTGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSS
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB8 VKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAEM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAEM
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB8 QLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCSS
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB8 LLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQNG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQNG
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB8 SSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAKN
              370       380       390       400       410       420

     420       430       440       450       460       470         
pF1KB8 QEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAVL
              430       440       450       460       470       480

     480        
pF1KB8 SVPAVTLVA
       :::::::::
XP_016 SVPAVTLVA
                

>>XP_016859275 (OMIM: 613817) PREDICTED: SPATS2-like pro  (489 aa)
 initn: 2799 init1: 2799 opt: 3186  Z-score: 2447.2  bits: 462.3 E(85289): 1.4e-129
Smith-Waterman score: 3186; 99.8% identity (99.8% similar) in 489 aa overlap (1-488:1-489)

               10        20        30        40        50        60
pF1KB8 MAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWN
               10        20        30        40        50        60

                70        80        90       100       110         
pF1KB8 MTGKK-NNKRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDS
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTGKKKNNKRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDS
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB8 ANEKPALIPREKKISILEEPSKALRGVTGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ANEKPALIPREKKISILEEPSKALRGVTGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSS
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB8 VKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAEM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAEM
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB8 QLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCSS
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB8 LLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQNG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQNG
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB8 SSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAKN
              370       380       390       400       410       420

     420       430       440       450       460       470         
pF1KB8 QEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAVL
              430       440       450       460       470       480

     480        
pF1KB8 SVPAVTLVA
       :::::::::
XP_016 SVPAVTLVA
                

>>XP_005246516 (OMIM: 613817) PREDICTED: SPATS2-like pro  (489 aa)
 initn: 2799 init1: 2799 opt: 3186  Z-score: 2447.2  bits: 462.3 E(85289): 1.4e-129
Smith-Waterman score: 3186; 99.8% identity (99.8% similar) in 489 aa overlap (1-488:1-489)

               10        20        30        40        50        60
pF1KB8 MAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWN
               10        20        30        40        50        60

                70        80        90       100       110         
pF1KB8 MTGKK-NNKRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDS
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MTGKKKNNKRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDS
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB8 ANEKPALIPREKKISILEEPSKALRGVTGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ANEKPALIPREKKISILEEPSKALRGVTGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSS
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB8 VKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAEM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAEM
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB8 QLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCSS
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB8 LLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQNG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQNG
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB8 SSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAKN
              370       380       390       400       410       420

     420       430       440       450       460       470         
pF1KB8 QEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAVL
              430       440       450       460       470       480

     480        
pF1KB8 SVPAVTLVA
       :::::::::
XP_005 SVPAVTLVA
                

>>XP_016859273 (OMIM: 613817) PREDICTED: SPATS2-like pro  (519 aa)
 initn: 2799 init1: 2799 opt: 3186  Z-score: 2446.8  bits: 462.3 E(85289): 1.5e-129
Smith-Waterman score: 3186; 99.8% identity (99.8% similar) in 489 aa overlap (1-488:31-519)

                                             10        20        30
pF1KB8                               MAELNTHVNVKEKIYAVRSVVPNKSNNEIV
                                     ::::::::::::::::::::::::::::::
XP_016 MDPFCHSSSETRLLSGTLLWIPRAYSTRSKMAELNTHVNVKEKIYAVRSVVPNKSNNEIV
               10        20        30        40        50        60

               40        50        60         70        80         
pF1KB8 LVLQQFDFNVDKAVQAFVDGSAIQVLKEWNMTGKK-NNKRKRSKSKQHQGNKDAKDKVER
       ::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::
XP_016 LVLQQFDFNVDKAVQAFVDGSAIQVLKEWNMTGKKKNNKRKRSKSKQHQGNKDAKDKVER
               70        80        90       100       110       120

      90       100       110       120       130       140         
pF1KB8 PEAGPLQPQPPQIQNGPMNGCEKDSSSTDSANEKPALIPREKKISILEEPSKALRGVTGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEAGPLQPQPPQIQNGPMNGCEKDSSSTDSANEKPALIPREKKISILEEPSKALRGVTGP
              130       140       150       160       170       180

     150       160       170       180       190       200         
pF1KB8 NIEKSVKDLQRCTVSLTRYRVMIKEEVDSSVKKIKAAFAELHNCIIDKEVSLMAEMDKVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NIEKSVKDLQRCTVSLTRYRVMIKEEVDSSVKKIKAAFAELHNCIIDKEVSLMAEMDKVK
              190       200       210       220       230       240

     210       220       230       240       250       260         
pF1KB8 EEAMEILTARQKKAEELKRLTDLASQMAEMQLAELRAEIKHFVSERKYDEELGKAARFSC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEAMEILTARQKKAEELKRLTDLASQMAEMQLAELRAEIKHFVSERKYDEELGKAARFSC
              250       260       270       280       290       300

     270       280       290       300       310       320         
pF1KB8 DIEQLKAQIMLCGEITHPKNNYSSRTPCSSLLPLLNAHAATSGKQSNFSRKSSTHNKPSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DIEQLKAQIMLCGEITHPKNNYSSRTPCSSLLPLLNAHAATSGKQSNFSRKSSTHNKPSE
              310       320       330       340       350       360

     330       340       350       360       370       380         
pF1KB8 GKAANPKMVSSLPSTADPSHQTMPANKQNGSSNQRRRFNPQYHNNRLNGPAKSQGSGNEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKAANPKMVSSLPSTADPSHQTMPANKQNGSSNQRRRFNPQYHNNRLNGPAKSQGSGNEA
              370       380       390       400       410       420

     390       400       410       420       430       440         
pF1KB8 EPLGKGNSRHEHRRQPHNGFRPKNKGGAKNQEASLGMKTPEAPAHSEKPRRRQHAADTSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EPLGKGNSRHEHRRQPHNGFRPKNKGGAKNQEASLGMKTPEAPAHSEKPRRRQHAADTSE
              430       440       450       460       470       480

     450       460       470       480        
pF1KB8 ARPFRGSVGRVSQCNLCPTRIEVSTDAAVLSVPAVTLVA
       :::::::::::::::::::::::::::::::::::::::
XP_016 ARPFRGSVGRVSQCNLCPTRIEVSTDAAVLSVPAVTLVA
              490       500       510         

>>NP_001269672 (OMIM: 613817) SPATS2-like protein isofor  (498 aa)
 initn: 2274 init1: 2237 opt: 2237  Z-score: 1722.4  bits: 328.2 E(85289): 3.4e-89
Smith-Waterman score: 2659; 85.9% identity (85.9% similar) in 498 aa overlap (61-488:1-498)

               40        50        60         70        80         
pF1KB8 LVLQQFDFNVDKAVQAFVDGSAIQVLKEWNMTGKK-NNKRKRSKSKQHQGNKDAKDKVER
                                     ::::: ::::::::::::::::::::::::
NP_001                               MTGKKKNNKRKRSKSKQHQGNKDAKDKVER
                                             10        20        30

      90       100       110       120       130       140         
pF1KB8 PEAGPLQPQPPQIQNGPMNGCEKDSSSTDSANEKPALIPREKKISILEEPSKALRGVT--
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
NP_001 PEAGPLQPQPPQIQNGPMNGCEKDSSSTDSANEKPALIPREKKISILEEPSKALRGVTEG
               40        50        60        70        80        90

                                                                   
pF1KB8 ------------------------------------------------------------
                                                                   
NP_001 NRLLQQKLSLDGNPKPIHGTTERSDGLQWSAEQPCNPSKPKAKTSPVKSNTPAAHLEIKP
              100       110       120       130       140       150

              150       160       170       180       190       200
pF1KB8 -------GPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSSVKKIKAAFAELHNCIIDKEVS
              :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DELAKKRGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSSVKKIKAAFAELHNCIIDKEVS
              160       170       180       190       200       210

              210       220       230       240       250       260
pF1KB8 LMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAEMQLAELRAEIKHFVSERKYDEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAEMQLAELRAEIKHFVSERKYDEE
              220       230       240       250       260       270

              270       280       290       300       310       320
pF1KB8 LGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCSSLLPLLNAHAATSGKQSNFSRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCSSLLPLLNAHAATSGKQSNFSRK
              280       290       300       310       320       330

              330       340       350       360       370       380
pF1KB8 SSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQNGSSNQRRRFNPQYHNNRLNGPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQNGSSNQRRRFNPQYHNNRLNGPA
              340       350       360       370       380       390

              390       400       410       420       430       440
pF1KB8 KSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAKNQEASLGMKTPEAPAHSEKPRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAKNQEASLGMKTPEAPAHSEKPRR
              400       410       420       430       440       450

              450       460       470       480        
pF1KB8 RQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAVLSVPAVTLVA
       ::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAVLSVPAVTLVA
              460       470       480       490        

>>NP_056350 (OMIM: 613817) SPATS2-like protein isoform a  (558 aa)
 initn: 2653 init1: 2237 opt: 2237  Z-score: 1721.6  bits: 328.2 E(85289): 3.7e-89
Smith-Waterman score: 2802; 86.5% identity (86.5% similar) in 520 aa overlap (39-488:39-558)

       10        20        30        40        50        60        
pF1KB8 NVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWNMTGKK-NN
                                     ::::::::::::::::::::::::::: ::
NP_056 NVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWNMTGKKKNN
       10        20        30        40        50        60        

        70        80        90       100       110       120       
pF1KB8 KRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDSANEKPALI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 KRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDSANEKPALI
       70        80        90       100       110       120        

       130       140                                               
pF1KB8 PREKKISILEEPSKALRGVT----------------------------------------
       ::::::::::::::::::::                                        
NP_056 PREKKISILEEPSKALRGVTEGNRLLQQKLSLDGNPKPIHGTTERSDGLQWSAEQPCNPS
      130       140       150       160       170       180        

                                    150       160       170        
pF1KB8 -----------------------------GPNIEKSVKDLQRCTVSLTRYRVMIKEEVDS
                                    :::::::::::::::::::::::::::::::
NP_056 KPKAKTSPVKSNTPAAHLEIKPDELAKKRGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDS
      190       200       210       220       230       240        

      180       190       200       210       220       230        
pF1KB8 SVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAE
      250       260       270       280       290       300        

      240       250       260       270       280       290        
pF1KB8 MQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCS
      310       320       330       340       350       360        

      300       310       320       330       340       350        
pF1KB8 SLLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SLLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQN
      370       380       390       400       410       420        

      360       370       380       390       400       410        
pF1KB8 GSSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 GSSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAK
      430       440       450       460       470       480        

      420       430       440       450       460       470        
pF1KB8 NQEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 NQEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAV
      490       500       510       520       530       540        

      480        
pF1KB8 LSVPAVTLVA
       ::::::::::
NP_056 LSVPAVTLVA
      550        

>>XP_005246514 (OMIM: 613817) PREDICTED: SPATS2-like pro  (558 aa)
 initn: 2653 init1: 2237 opt: 2237  Z-score: 1721.6  bits: 328.2 E(85289): 3.7e-89
Smith-Waterman score: 2802; 86.5% identity (86.5% similar) in 520 aa overlap (39-488:39-558)

       10        20        30        40        50        60        
pF1KB8 NVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWNMTGKK-NN
                                     ::::::::::::::::::::::::::: ::
XP_005 NVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWNMTGKKKNN
       10        20        30        40        50        60        

        70        80        90       100       110       120       
pF1KB8 KRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDSANEKPALI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDSANEKPALI
       70        80        90       100       110       120        

       130       140                                               
pF1KB8 PREKKISILEEPSKALRGVT----------------------------------------
       ::::::::::::::::::::                                        
XP_005 PREKKISILEEPSKALRGVTEGNRLLQQKLSLDGNPKPIHGTTERSDGLQWSAEQPCNPS
      130       140       150       160       170       180        

                                    150       160       170        
pF1KB8 -----------------------------GPNIEKSVKDLQRCTVSLTRYRVMIKEEVDS
                                    :::::::::::::::::::::::::::::::
XP_005 KPKAKTSPVKSNTPAAHLEIKPDELAKKRGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDS
      190       200       210       220       230       240        

      180       190       200       210       220       230        
pF1KB8 SVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAE
      250       260       270       280       290       300        

      240       250       260       270       280       290        
pF1KB8 MQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCS
      310       320       330       340       350       360        

      300       310       320       330       340       350        
pF1KB8 SLLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SLLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQN
      370       380       390       400       410       420        

      360       370       380       390       400       410        
pF1KB8 GSSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAK
      430       440       450       460       470       480        

      420       430       440       450       460       470        
pF1KB8 NQEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NQEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAV
      490       500       510       520       530       540        

      480        
pF1KB8 LSVPAVTLVA
       ::::::::::
XP_005 LSVPAVTLVA
      550        

>>XP_005246513 (OMIM: 613817) PREDICTED: SPATS2-like pro  (558 aa)
 initn: 2653 init1: 2237 opt: 2237  Z-score: 1721.6  bits: 328.2 E(85289): 3.7e-89
Smith-Waterman score: 2802; 86.5% identity (86.5% similar) in 520 aa overlap (39-488:39-558)

       10        20        30        40        50        60        
pF1KB8 NVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWNMTGKK-NN
                                     ::::::::::::::::::::::::::: ::
XP_005 NVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWNMTGKKKNN
       10        20        30        40        50        60        

        70        80        90       100       110       120       
pF1KB8 KRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDSANEKPALI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDSANEKPALI
       70        80        90       100       110       120        

       130       140                                               
pF1KB8 PREKKISILEEPSKALRGVT----------------------------------------
       ::::::::::::::::::::                                        
XP_005 PREKKISILEEPSKALRGVTEGNRLLQQKLSLDGNPKPIHGTTERSDGLQWSAEQPCNPS
      130       140       150       160       170       180        

                                    150       160       170        
pF1KB8 -----------------------------GPNIEKSVKDLQRCTVSLTRYRVMIKEEVDS
                                    :::::::::::::::::::::::::::::::
XP_005 KPKAKTSPVKSNTPAAHLEIKPDELAKKRGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDS
      190       200       210       220       230       240        

      180       190       200       210       220       230        
pF1KB8 SVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAE
      250       260       270       280       290       300        

      240       250       260       270       280       290        
pF1KB8 MQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCS
      310       320       330       340       350       360        

      300       310       320       330       340       350        
pF1KB8 SLLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SLLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQN
      370       380       390       400       410       420        

      360       370       380       390       400       410        
pF1KB8 GSSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAK
      430       440       450       460       470       480        

      420       430       440       450       460       470        
pF1KB8 NQEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NQEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAV
      490       500       510       520       530       540        

      480        
pF1KB8 LSVPAVTLVA
       ::::::::::
XP_005 LSVPAVTLVA
      550        




488 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 13:40:44 2016 done: Fri Nov  4 13:40:45 2016
 Total Scan time:  8.560 Total Display time:  0.110

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com