GENSCAN 1.0	Date run:  4-Nov-116	Time: 13:39:26

Sequence gi568815581f:27194396_27406884 : 212489 bp : 44.44% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4216   4248   33  0  0   71  105    31 0.163   1.07
 1.02 Intr +   6589   6656   68  0  2   95   94    62 0.330   5.20
 1.03 Term +  10737  10833   97  0  1   59   39    85 0.217  -1.86
 1.04 PlyA +  11468  11473    6                               1.05

 2.00 Prom +  14349  14388   40                              -2.76
 2.01 Init +  17185  17260   76  0  1   85   40    77 0.093   1.85
 2.02 Term +  31913  32055  143  0  2   29   47   176 0.728   5.69
 2.03 PlyA +  32319  32324    6                               1.05

 3.00 Prom +  35344  35383   40                               0.04
 3.01 Init +  39176  39181    6  1  0   94   76     0 0.153   0.27
 3.02 Intr +  49975  50026   52  0  1   94   92    47 0.131   4.18
 3.03 Intr +  56138  56382  245  0  2   38   29   170 0.037   3.32
 3.04 Intr +  58031  58371  341  1  2   -7   72   232 0.865   6.37
 3.05 Term +  58949  59540  592  2  1   41   38   223 0.474   6.60
 3.06 PlyA +  59716  59721    6                               1.05

 4.00 Prom +  60476  60515   40                              -2.96
 4.01 Init +  60600  60732  133  2  1   87   47    55 0.609   1.60
 4.02 Intr +  61712  61884  173  0  2   47   98    72 0.267   3.76
 4.03 Term +  82623  82694   72  2  0   63   49    73 0.380  -1.19
 4.04 PlyA +  83308  83313    6                               1.05

 5.00 Prom +  85993  86032   40                              -1.96
 5.01 Sngl +  86048  86542  495  1  0   74   42   558 0.820  45.85
 5.02 PlyA +  86559  86564    6                               1.05

 6.00 Prom +  90327  90366   40                              -7.06
 6.01 Init + 100001 100040   40  1  1   58   85    47 0.352   1.75
 6.02 Intr + 110385 110516  132  1  0   87   80    74 0.501   7.12
 6.03 Intr + 133083 133205  123  1  0   66   86    58 0.309   3.96
 6.04 Intr + 134645 134730   86  0  2  101   61    29 0.183   1.04
 6.05 Intr + 137753 137952  200  1  2   75   63    29 0.179  -2.75
 6.06 Term + 138433 138778  346  1  1   36   44   241 0.764   8.47
 6.07 PlyA + 140251 140256    6                              -0.45

 7.09 PlyA - 140296 140291    6                               1.05
 7.08 Term - 145810 145674  137  2  2   88   48    67 0.795   0.88
 7.07 Intr - 146947 146841  107  0  2   80   90    15 0.386   0.76
 7.06 Intr - 157882 157759  124  2  1   57   85    72 0.727   3.44
 7.05 Intr - 158583 158494   90  1  0   79   57   101 0.861   6.07
 7.04 Intr - 172003 171894  110  0  2   39  100    50 0.138   1.23
 7.03 Intr - 172915 172765  151  2  1   63   22    93 0.086  -0.58
 7.02 Intr - 186917 186825   93  0  0   47   77    70 0.544   1.74
 7.01 Init - 188705 188663   43  2  1   99   84    55 0.831   6.78
 7.00 Prom - 196755 196716   40                              -4.06

 8.03 PlyA - 197745 197740    6                               1.05
 8.02 Term - 204041 203873  169  1  1  106   48    82 0.601   3.35
 8.01 Intr - 210150 210025  126  2  0   48  111    23 0.319   0.39

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:27194396_27406884|GENSCAN_predicted_peptide_1|65_aa
MAHIHPQPQILAMGFDVTGLDLNPDLPDDVGHLTMVSRDVLNYNEKNALKEVINKSIEIS
LQILT

>gi568815581f:27194396_27406884|GENSCAN_predicted_CDS_1|198_bp
atggcccatatccatcctcagcctcagatcctggccatgggttttgatgttacaggtttg
gatttgaatccagacctgccagatgatgttgggcacctcacgatggtatccagggatgtg
ctcaattacaatgagaagaatgccttgaaagaagtaattaacaagagcattgaaatatct
ctccagattttgacttaa

>gi568815581f:27194396_27406884|GENSCAN_predicted_peptide_2|72_aa
MGFRCVGRAGLQLLAASDPPASASRGGIPEEGIVNTGEDSSMHVISPEDLPVGQDVEVED
SDISDIDDPDDL

>gi568815581f:27194396_27406884|GENSCAN_predicted_CDS_2|219_bp
atggggtttcgctgtgttggccgggctggtctccagctcctggccgcgagtgatccgcca
gcctcggcctcccgaggaggtattccagaagaagggattgttaacacaggagaagacagc
tccatgcatgttatttcccccgaagatctcccagtgggacaagacgtggaggtggaagac
agtgatattagtgatattgatgatcctgatgatttgtag

>gi568815581f:27194396_27406884|GENSCAN_predicted_peptide_3|411_aa
MELQTINTDCLNGEENVSEGELRDTCTRFSSRFDQVEESVSVIEDQINEMKQEEKFREKR
VKRNEQSLREIWDYRKDQIYIWLLYLKVTGRMEPSWKTLFRINKIDIPLTSQIKKKREKN
EIDAVKNDKGDITTDPTEIQTTIREYYKHLYTNKLENLEEMDKFLDTYTLPRLNHEEVES
LNGPVTGSEIEAIINSLPMKKSPGPDGFTAKFYQRAIRQEKEIKGIQLGKEEVKLSMFAD
DMIVYLENLIISVQNPLKLISNFSKVSGYKINVQKSQAFLYINNRQTESQIMSELPFTIA
TKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWIGRINIMKMAILPKFI
YRFNAIPIKVPMTFFTELEKTTLKFIWNQKKSLHCQDNPKPKEQSWRHHTT

>gi568815581f:27194396_27406884|GENSCAN_predicted_CDS_3|1236_bp
atggagctacaaactataaacaccgactgcctgaatggagaagaaaatgtatcagaagga
gaactacgtgacacatgcacaagattcagtagccgattcgatcaagtggaagaaagtgta
tcagtgattgaagatcaaattaatgaaatgaagcaagaagagaagtttagagaaaaaaga
gtaaaaagaaacgaacaaagcctccgagaaatatgggactacaggaaagaccaaatctac
atttggctgctgtacctgaaagtgacagggagaatggaaccaagctggaaaacactcttc
aggatcaacaaaattgatataccgctaacaagccaaataaagaagaaaagagagaagaat
gaaatagacgcagtaaaaaatgataaaggggatatcaccacagatcccacagaaatacaa
actaccatcagagaatactataaacacctctacacaaataaactagaaaatctagaagaa
atggataaattcctggacacatacaccctcccaagactaaaccacgaagaagttgaatcc
ctgaatggaccagtaacaggctctgaaattgaggcaataattaatagcctaccaatgaaa
aaaagtccaggaccagatggattcacagccaaattctaccagagggcaatcaggcaagaa
aaagaaataaagggtattcaattaggaaaagaggaagtcaaattgtccatgtttgcagat
gacatgattgtatatttagaaaacctcatcatctctgtccaaaatccccttaagctgata
agcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattccta
tacatcaataatagacaaacagagagccaaatcatgagtgaactcccattcacaattgct
acgaagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaag
gagaactacaaaccactgctcaatgaaataaaagaggacacaaacaaatggaagaacatt
ccatgctcatggataggaagaatcaatatcatgaaaatggcgatactgcccaagttcatt
tatagattcaatgccatccccatcaaggtaccaatgactttcttcacagaattggaaaaa
actactttaaagttcatatggaaccaaaaaaagagcctgcattgccaagacaaccctaag
ccaaaagaacaaagctggaggcatcatactacctga

>gi568815581f:27194396_27406884|GENSCAN_predicted_peptide_4|125_aa
MEYYAAIKKDAFMSFVGTWMKLETIILSKLSQGQKTKHRMFSFIGTLPQFLSAKTHPIAS
GPRSSGSWKEDNHAFPRSSRQATSGLDISFLQPLTGLDLLPQLVFAFLYAFLTAFPDVFK
LQDQL

>gi568815581f:27194396_27406884|GENSCAN_predicted_CDS_4|378_bp
atggaatactatgcagccataaagaaggatgcattcatgtcctttgtagggacatggatg
aagctggaaaccatcattctgagcaaactatcgcaaggacagaaaactaaacaccgcatg
ttctcattcataggcactcttcctcagttcctcagtgccaaaacccatcccattgcctct
ggaccccggtcctctggaagctggaaggaggataatcatgcttttcctagaagctccagg
caagctaccagtggtttggatatttcattcctgcagcccttgactgggctggacctgctg
ccccagctggtatttgcttttctctacgccttcctgactgcctttcctgacgtcttcaag
ctccaggatcagctgtga

>gi568815581f:27194396_27406884|GENSCAN_predicted_peptide_5|164_aa
MLHGEDLSSTPIAMWSKSLLQSMQVSGQRKMTTAMAGRKHGSGLMEVNRRPLEMMESCTL
HYKLLEPVLLLGKERFADVDIHVLLKGDGQVAQIHAICQSISKALVACYQKYVWLPRRSK
TSSSNVAGPCWWLTLIAANPESLEALVTVLVTRNPTLKPITSYQ

>gi568815581f:27194396_27406884|GENSCAN_predicted_CDS_5|495_bp
atgctgcatggtgaggatctctcatctacgcccatagccatgtggtccaagagcctgctg
cagtccatgcaggtctctggacagaggaagatgaccacagccatggcgggccgcaaacat
ggcagtggcctcatggaagtgaacaggcggcccctggagatgatggagtcatgcacactg
cattacaagctgctggaaccagttctgcttctgggcaaggagcgatttgctgacgtggac
atccatgtcctactgaagggtgatggtcaggtggcccagattcatgctatctgtcagtcc
atctccaaagccctggtggcctgttaccagaaatacgtgtggcttccaagaaggtcaaag
acgtcctcatccaatgtggctggaccctgctggtggctgaccctcatcgctgcaaatcca
gaaagtttggaggccctggtgaccgtgcttgttactaggaatcctaccctaaagcccatc
acgagttatcagtaa

>gi568815581f:27194396_27406884|GENSCAN_predicted_peptide_6|308_aa
MASFPPRVNEKEIGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDDCF
PTVQSPFKPQAPVCICEWQSRQNLTSTGHYLAKKVLVPRPGSKPSAQRGSTKPHQSPGTT
RVDPQTRISSCPAEQTRPIQAASGSTEAQELTPLDRVSKVSFLLAKRILEGKTNDILRHP
RAESEAERRLNGLGQGEADAAGAGVQGDSEAWLCSRGSAVALERLPFRPRLGYDSSSVEE
KGAFVSAQLRRLLDSTALRWPRVRRAGEAAREAAPELPTSCCAIGSASALPSESSQVGGK
TGREIVTP

>gi568815581f:27194396_27406884|GENSCAN_predicted_CDS_6|927_bp
atggccagctttcccccgagggtcaacgagaaagagatcggaaaactcctccttaacttg
gtagatcatactgaagtggtcagagatttaacttttgctccagatggaagcttgatcctg
gtgtcagcttcaagagacaaaactctcagagtatgggacctgaaagatgatgattgcttt
ccaacagtgcagagtccatttaaaccacaagcacccgtgtgtatctgcgagtggcaatct
cgccagaacctcaccagcactgggcattatcttgccaaaaaagttttggtaccccggcct
ggatcaaagcccagtgcacagaggggctccacaaaaccacaccagtcacctggcaccacc
agggtggacccccagaccaggatctcctcctgtccagctgagcagaccaggcctatacag
gctgcttctggctccactgaggcccaggagcttacacctttggaccgggtgtcaaaagtg
tccttcttattagcaaaaagaattttggagggaaaaacaaatgacatcctcagacatcct
agggcagagtcagaagcagagaggagactgaatgggctcggccaaggagaagcagacgcg
gccggcgcaggcgtccagggtgactcggaggcgtggctctgcagtcgcggctctgcagtc
gccttggagcggctgcccttccgaccccgcctgggctatgactcatcttcggtggaggag
aaaggggcctttgtgagcgcccagctccggcgtctcctggacagcaccgccctccggtgg
ccgcgagtcaggagggctggggaagccgcccgagaggcagcgcccgagctccccacgagc
tgctgtgccattggaagcgccagcgccctcccctcggagtccagccaagtcggggggaag
actgggagagaaatcgtcaccccctag

>gi568815581f:27194396_27406884|GENSCAN_predicted_peptide_7|284_aa
MTCPVPNTELMLNAWLEQEGREVVTQEAPKRLNRGGGGPEITEGRGPKAERFGSCVSELV
ENTHTRLLRLLPADPLQDFHICLQPSQGLCYGLITNLQVFEDGVHLPPHPGKGPSQLLIF
MDNHSVDLQAMEDYFLRLKGLLFTTLLLKLSDFYLPFKIFSMVSVFLYCIAVVLYVGYRN
LYQGSHKLPMIGFVITLVAIFCDCFLGRAADMFEEPSKTPSRAVAFFLRANEFLQGLGRG
VTQLNTTALTPSEFISTPTNQQQAPIGWPPPPLTQTAFEPWRLI

>gi568815581f:27194396_27406884|GENSCAN_predicted_CDS_7|855_bp
atgacctgcccagtgcccaacacggagttgatgctcaatgcatggctggaacaggaaggg
agagaagtggtgacccaagaggcccccaagaggctcaaccggggcgggggagggccagaa
atcaccgaggggcgtggccccaaagcagagcgatttgggtcctgtgtctcagagctggtg
gaaaacacacatacacggctacttcgtcttctgcctgcagatccactccaggatttccac
atctgcctgcagcccagtcagggcctctgctatgggctcatcacgaaccttcaagtgttt
gaggatggtgtccatcttcccccgcatccaggcaagggccctagccagctcctaatattt
atggacaaccactctgtagaccttcaggctatggaagactatttccttcgattgaaaggc
cttctcttcactacgctgctgctcaaactgtctgacttctacctgccctttaaaatcttc
tccatggtctctgtcttcctgtactgcattgctgtcgtgctttatgttggttacaggaac
ctatatcagggtagtcataaacttcccatgattggctttgtcattactcttgttgccatc
ttttgcgattgcttcctgggaagggctgcagacatgtttgaggagcccagtaaaacaccc
tcaagggctgttgccttcttcctccgggctaatgaattcttgcaggggctgggaagagga
gtgactcagctcaacacaacagctttgaccccctctgagttcatctccactccaaccaat
cagcagcaagcacccattggctggccacccccaccccttacccaaactgcctttgagcct
tggagattgatatga

>gi568815581f:27194396_27406884|GENSCAN_predicted_peptide_8|98_aa
XKYFGAERNIPNNPHKSPMRREPETRKLMFREDQRPPTKPQSWAGVSLGYKEGKEPWMCT
LRDQPLGLEPSASGPEMKARYYHYNHDHDNDYDDFKIH

>gi568815581f:27194396_27406884|GENSCAN_predicted_CDS_8|297_bp
nngaaatattttggggctgaaagaaacatcccaaataatcctcacaagagtccgatgaga
agagagccagagacaaggaaactgatgttcagagaggaccagagaccccccacaaagcca
cagagttgggcaggtgtctctctaggttataaagaaggcaaggagccttggatgtgtact
cttcgtgatcagccacttgggctggagcctagcgcctctggtcccgaaatgaaagcaaga
tactatcactataatcatgatcatgacaatgattatgatgattttaaaattcactga