Result of FASTA (omim) for pF1KB8458
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8458, 339 aa
  1>>>pF1KB8458 339 - 339 aa - 339 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.3692+/-0.00048; mu= 11.5299+/- 0.029
 mean_var=182.8477+/-40.074, 0's: 0 Z-trim(113.4): 269  B-trim: 55 in 1/54
 Lambda= 0.094848
 statistics sampled from 22376 (22753) to 22376 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.637), E-opt: 0.2 (0.267), width:  16
 Scan time:  7.960

The best scores are:                                      opt bits E(85289)
NP_000622 (OMIM: 601488,613960) neutrophil cytosol ( 339) 2221 316.8 4.2e-86
NP_038202 (OMIM: 601488,613960) neutrophil cytosol ( 348) 1673 241.8 1.6e-63
XP_016884297 (OMIM: 601488,613960) PREDICTED: neut ( 236) 1563 226.6 4.3e-59
NP_000256 (OMIM: 233700,608512) neutrophil cytosol ( 390)  240 45.8 0.00018
NP_001295104 (OMIM: 249420,613293) SH3 and PX doma ( 430)  231 44.6 0.00045
XP_016864840 (OMIM: 249420,613293) PREDICTED: SH3  ( 939)  232 45.2 0.00066
NP_001017995 (OMIM: 249420,613293) SH3 and PX doma ( 911)  231 45.1 0.00071
NP_001288037 (OMIM: 603362) endophilin-A3 isoform  ( 278)  197 39.7  0.0088
NP_001311114 (OMIM: 603362) endophilin-A3 isoform  ( 278)  197 39.7  0.0088
XP_016877975 (OMIM: 603362) PREDICTED: endophilin- ( 278)  197 39.7  0.0088
NP_001311116 (OMIM: 603362) endophilin-A3 isoform  ( 278)  197 39.7  0.0088
NP_001311115 (OMIM: 603362) endophilin-A3 isoform  ( 312)  197 39.8  0.0094
NP_001311113 (OMIM: 603362) endophilin-A3 isoform  ( 312)  197 39.8  0.0094


>>NP_000622 (OMIM: 601488,613960) neutrophil cytosol fac  (339 aa)
 initn: 2221 init1: 2221 opt: 2221  Z-score: 1666.8  bits: 316.8 E(85289): 4.2e-86
Smith-Waterman score: 2221; 100.0% identity (100.0% similar) in 339 aa overlap (1-339:1-339)

               10        20        30        40        50        60
pF1KB8 MAVAQQLRAESDFEQLPDDVAISANIADIEEKRGFTSHFVFVIEVKTKGGSKYLIYRRYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MAVAQQLRAESDFEQLPDDVAISANIADIEEKRGFTSHFVFVIEVKTKGGSKYLIYRRYR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 QFHALQSKLEERFGPDSKSSALACTLPTLPAKVYVGVKQEIAEMRIPALNAYMKSLLSLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 QFHALQSKLEERFGPDSKSSALACTLPTLPAKVYVGVKQEIAEMRIPALNAYMKSLLSLP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRTRKVKSVSPQGNSVDRMAAPRAEALFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRTRKVKSVSPQGNSVDRMAAPRAEALFD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 FTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKDFPEEDDPTNWL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKDFPEEDDPTNWL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 RCYYYEDTISTIKDIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDAEGDLVRLLSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RCYYYEDTISTIKDIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDAEGDLVRLLSD
              250       260       270       280       290       300

              310       320       330         
pF1KB8 EDVALMVRQARGLPSQKRLFPWKLHITQKDNYRVYNTMP
       :::::::::::::::::::::::::::::::::::::::
NP_000 EDVALMVRQARGLPSQKRLFPWKLHITQKDNYRVYNTMP
              310       320       330         

>>NP_038202 (OMIM: 601488,613960) neutrophil cytosol fac  (348 aa)
 initn: 1673 init1: 1673 opt: 1673  Z-score: 1261.4  bits: 241.8 E(85289): 1.6e-63
Smith-Waterman score: 1673; 98.8% identity (99.6% similar) in 258 aa overlap (1-258:1-258)

               10        20        30        40        50        60
pF1KB8 MAVAQQLRAESDFEQLPDDVAISANIADIEEKRGFTSHFVFVIEVKTKGGSKYLIYRRYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_038 MAVAQQLRAESDFEQLPDDVAISANIADIEEKRGFTSHFVFVIEVKTKGGSKYLIYRRYR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 QFHALQSKLEERFGPDSKSSALACTLPTLPAKVYVGVKQEIAEMRIPALNAYMKSLLSLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_038 QFHALQSKLEERFGPDSKSSALACTLPTLPAKVYVGVKQEIAEMRIPALNAYMKSLLSLP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRTRKVKSVSPQGNSVDRMAAPRAEALFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_038 VWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRTRKVKSVSPQGNSVDRMAAPRAEALFD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 FTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKDFPEEDDPTNWL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_038 FTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKDFPEEDDPTNWL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 RCYYYEDTISTIKDIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDAEGDLVRLLSD
       :::::::::::::..: :                                          
NP_038 RCYYYEDTISTIKSVAWEGGACPAFLPSLRPLPLTSPSHGSLSHSKAPSGSQMSHNAVTS
              250       260       270       280       290       300

>>XP_016884297 (OMIM: 601488,613960) PREDICTED: neutroph  (236 aa)
 initn: 1563 init1: 1563 opt: 1563  Z-score: 1181.9  bits: 226.6 E(85289): 4.3e-59
Smith-Waterman score: 1563; 100.0% identity (100.0% similar) in 236 aa overlap (104-339:1-236)

            80        90       100       110       120       130   
pF1KB8 GPDSKSSALACTLPTLPAKVYVGVKQEIAEMRIPALNAYMKSLLSLPVWVLMDEDVRIFF
                                     ::::::::::::::::::::::::::::::
XP_016                               MRIPALNAYMKSLLSLPVWVLMDEDVRIFF
                                             10        20        30

           140       150       160       170       180       190   
pF1KB8 YQSPYDSEQVPQALRRLRPRTRKVKSVSPQGNSVDRMAAPRAEALFDFTGNSKLELNFKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YQSPYDSEQVPQALRRLRPRTRKVKSVSPQGNSVDRMAAPRAEALFDFTGNSKLELNFKA
               40        50        60        70        80        90

           200       210       220       230       240       250   
pF1KB8 GDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKDFPEEDDPTNWLRCYYYEDTISTIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKDFPEEDDPTNWLRCYYYEDTISTIK
              100       110       120       130       140       150

           260       270       280       290       300       310   
pF1KB8 DIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDAEGDLVRLLSDEDVALMVRQARGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDAEGDLVRLLSDEDVALMVRQARGL
              160       170       180       190       200       210

           320       330         
pF1KB8 PSQKRLFPWKLHITQKDNYRVYNTMP
       ::::::::::::::::::::::::::
XP_016 PSQKRLFPWKLHITQKDNYRVYNTMP
              220       230      

>>NP_000256 (OMIM: 233700,608512) neutrophil cytosol fac  (390 aa)
 initn: 200 init1:  98 opt: 240  Z-score: 201.2  bits: 45.8 E(85289): 0.00018
Smith-Waterman score: 240; 26.0% identity (53.0% similar) in 319 aa overlap (31-334:15-319)

               10        20        30         40        50         
pF1KB8 MAVAQQLRAESDFEQLPDDVAISANIADIEEKRGFTS-HFVFVIEVKTKGGSKYLIYRRY
                                     :::   : :.:... :: .  :. ..:::.
NP_000                 MGDTFIRHIALLGFEKRFVPSQHYVYMFLVKWQDLSEKVVYRRF
                               10        20        30        40    

      60        70         80        90        100       110       
pF1KB8 RQFHALQSKLEERFGPDSKS-SALACTLPTLPA-KVYVGVKQEIAEMRIPALNAYMKSLL
        ... ... :.: :  .. . .     .: ::: : . :  :. :: :  .:. : ..:.
NP_000 TEIYEFHKTLKEMFPIEAGAINPENRIIPHLPAPKWFDG--QRAAENRQGTLTEYCSTLM
           50        60        70        80          90       100  

       120       130            140       150       160       170  
pF1KB8 SLPVWVLMDEDVRIFFYQSPYD-----SEQVPQALRRLRPRTRKVKSVSPQGNSVDRMAA
       :::. .     .  ::   : :     ..:. .    : :.  :  ...  :  .  . .
NP_000 SLPTKISRCPHLLDFFKVRPDDLKLPTDNQTKKPETYLMPKDGKSTATDITGPII--LQT
            110       120       130       140       150         160

            180       190       200       210       220       230  
pF1KB8 PRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKDFPE
        :: : .. :..:  :. ...:::. .. . .. :    ...  : .: ::.. : : :.
NP_000 YRAIANYEKTSGS--EMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPL-DSPD
              170         180       190       200       210        

             240       250       260       270            280      
pF1KB8 E-DDPTNWLRCYYYEDTISTIKDIAVEEDLSSTPLLKDLLELTRREFQ-----REDIALN
       : .::      :  :  ..     ::: :  :  :  . .:. .. ..     :.: . .
NP_000 ETEDPEP---NYAGEPYVAIKAYTAVEGDEVSL-LEGEAVEVIHKLLDGWWVIRKDDVTG
       220          230       240        250       260       270   

        290       300       310        320       330               
pF1KB8 YRDAEGDLVRLLSDEDVALMVRQA-RGLPSQKRLFPWKLHITQKDNYRVYNTMP      
       :  .   .    : .::.   ::  :: : ..  .     : :..  :.           
NP_000 YFPS---MYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKRLSQDAYRRNSVR
              280       290       300       310       320       330

NP_000 FLQQRRRQARPGPQSPGSPLEEERQTQRSKPQPAVPPRPSADLILNRCSESTKRKLASAV
              340       350       360       370       380       390

>>NP_001295104 (OMIM: 249420,613293) SH3 and PX domain-c  (430 aa)
 initn: 130 init1:  74 opt: 231  Z-score: 194.0  bits: 44.6 E(85289): 0.00045
Smith-Waterman score: 231; 22.8% identity (56.8% similar) in 241 aa overlap (17-247:3-236)

               10        20        30        40        50        60
pF1KB8 MAVAQQLRAESDFEQLPDDVAISANIADIEEKRGFTSHFVFVIEVKTKGGSKYLIYRRYR
                       :    . ... :....:  ..:.:..:.:  ..::   ::::: 
NP_001               MPPRRSIVEVKVLDVQKRRVPNKHYVYIIRVTWSSGSTEAIYRRYS
                             10        20        30        40      

               70         80        90         100       110       
pF1KB8 QFHALQSKLEERFGPDS-KSSALACTLPTLPAKVYVGVKQ--EIAEMRIPALNAYMKSLL
       .:  :: .. ..:  .. ...     .: ::.:.    ..  ..:  :.  .. : :.:.
NP_001 KFFDLQMQMLDKFPMEGGQKDPKQRIIPFLPGKILFRRSHIRDVAVKRLIPIDEYCKALI
         50        60        70        80        90       100      

       120       130       140       150       160       170       
pF1KB8 SLPVWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRTRKVKSVSPQGNSVDRMAAPRAEA
       .:: .. . ..:  ::   : : .  :.     . .  : :: . : .::: :.  .  .
NP_001 QLPPYISQCDEVLQFFETRPEDLNP-PK-----EEHIGKKKSGGDQ-TSVDPMVLEQYVV
        110       120       130             140        150         

       180       190       200       210       220           230   
pF1KB8 LFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVK----ILKDF---
       . ..  . . :.....:.:. .. . .. :   ..    :  : . ..    .  .:   
NP_001 VANYQKQESSEISLSVGQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQ
     160       170       180       190       200       210         

              240       250       260       270       280       290
pF1KB8 PEEDDPTNWLRCYYYEDTISTIKDIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDA
       :::..  . .  :  .:                                           
NP_001 PEEEEKYTVIYPYTARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYLKKNS
     220       230       240       250       260       270         

>>XP_016864840 (OMIM: 249420,613293) PREDICTED: SH3 and   (939 aa)
 initn:  98 init1:  74 opt: 232  Z-score: 191.1  bits: 45.2 E(85289): 0.00066
Smith-Waterman score: 232; 22.2% identity (57.4% similar) in 230 aa overlap (17-239:3-225)

               10        20        30        40        50        60
pF1KB8 MAVAQQLRAESDFEQLPDDVAISANIADIEEKRGFTSHFVFVIEVKTKGGSKYLIYRRYR
                       :    . ... :....:  ..:.:..:.:  ..::   ::::: 
XP_016               MPPRRSIVEVKVLDVQKRRVPNKHYVYIIRVTWSSGSTEAIYRRYS
                             10        20        30        40      

               70         80        90         100       110       
pF1KB8 QFHALQSKLEERFGPDS-KSSALACTLPTLPAKVYVGVKQ--EIAEMRIPALNAYMKSLL
       .:  :: .. ..:  .. ...     .: ::.:.    ..  ..:  :.  .. : :.:.
XP_016 KFFDLQMQMLDKFPMEGGQKDPKQRIIPFLPGKILFRRSHIRDVAVKRLIPIDEYCKALI
         50        60        70        80        90       100      

       120       130       140       150       160       170       
pF1KB8 SLPVWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRTRKVKSVSPQGNSVDRMAAPRAEA
       .:: .. . ..:  ::   : : .  :.     . .  : :: . : .::: :.  .  .
XP_016 QLPPYISQCDEVLQFFETRPEDLNP-PK-----EEHIGKKKSGGDQ-TSVDPMVLEQYVV
        110       120       130             140        150         

       180       190       200       210       220           230   
pF1KB8 LFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVK----ILKDFPEE
       . ..  . . :.....:.:. .. . .. :   ..    :  : . ..    .  .:  .
XP_016 VANYQKQESSEISLSVGQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQ
     160       170       180       190       200       210         

           240       250       260       270       280       290   
pF1KB8 DDPTNWLRCYYYEDTISTIKDIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDAEGD
        . ..:                                                      
XP_016 PEEVSWRYWSLPRPVGRRRTLGDLYAISWRQEEKYTVIYPYTARDQDEMNLERGAVVEVI
     220       230       240       250       260       270         

>>NP_001017995 (OMIM: 249420,613293) SH3 and PX domain-c  (911 aa)
 initn:  98 init1:  74 opt: 231  Z-score: 190.5  bits: 45.1 E(85289): 0.00071
Smith-Waterman score: 231; 22.8% identity (56.8% similar) in 241 aa overlap (17-247:3-236)

               10        20        30        40        50        60
pF1KB8 MAVAQQLRAESDFEQLPDDVAISANIADIEEKRGFTSHFVFVIEVKTKGGSKYLIYRRYR
                       :    . ... :....:  ..:.:..:.:  ..::   ::::: 
NP_001               MPPRRSIVEVKVLDVQKRRVPNKHYVYIIRVTWSSGSTEAIYRRYS
                             10        20        30        40      

               70         80        90         100       110       
pF1KB8 QFHALQSKLEERFGPDS-KSSALACTLPTLPAKVYVGVKQ--EIAEMRIPALNAYMKSLL
       .:  :: .. ..:  .. ...     .: ::.:.    ..  ..:  :.  .. : :.:.
NP_001 KFFDLQMQMLDKFPMEGGQKDPKQRIIPFLPGKILFRRSHIRDVAVKRLIPIDEYCKALI
         50        60        70        80        90       100      

       120       130       140       150       160       170       
pF1KB8 SLPVWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRTRKVKSVSPQGNSVDRMAAPRAEA
       .:: .. . ..:  ::   : : .  :.     . .  : :: . : .::: :.  .  .
NP_001 QLPPYISQCDEVLQFFETRPEDLNP-PK-----EEHIGKKKSGGDQ-TSVDPMVLEQYVV
        110       120       130             140        150         

       180       190       200       210       220           230   
pF1KB8 LFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVK----ILKDF---
       . ..  . . :.....:.:. .. . .. :   ..    :  : . ..    .  .:   
NP_001 VANYQKQESSEISLSVGQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQ
     160       170       180       190       200       210         

              240       250       260       270       280       290
pF1KB8 PEEDDPTNWLRCYYYEDTISTIKDIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDA
       :::..  . .  :  .:                                           
NP_001 PEEEEKYTVIYPYTARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYLKKNS
     220       230       240       250       260       270         

>>NP_001288037 (OMIM: 603362) endophilin-A3 isoform b [H  (278 aa)
 initn: 210 init1: 187 opt: 197  Z-score: 171.0  bits: 39.7 E(85289): 0.0088
Smith-Waterman score: 197; 29.9% identity (64.5% similar) in 107 aa overlap (129-232:173-278)

      100       110       120       130       140       150        
pF1KB8 QEIAEMRIPALNAYMKSLLSLPVWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRTRKVK
                                     .::   .:    :  :. ..:   .   :.
NP_001 VSQLAVFIEAALDYHRQSTEILQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVS
            150       160       170       180       190       200  

      160          170       180       190       200       210     
pF1KB8 SVS---PQGNSVDRMAAPRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGA
       ..:     :...  :  :  ..:.::  ... ::.:: ::.: : ..:...: :: ..: 
NP_001 TTSVVKTTGSNIP-MDQPCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGE
            210        220       230       240       250       260 

         220       230       240       250       260       270     
pF1KB8 TGIFPLSFVKILKDFPEEDDPTNWLRCYYYEDTISTIKDIAVEEDLSSTPLLKDLLELTR
       .:.::...:...  .:.                                           
NP_001 SGFFPINYVEVIVPLPQ                                           
             270                                                   

>>NP_001311114 (OMIM: 603362) endophilin-A3 isoform f [H  (278 aa)
 initn: 210 init1: 187 opt: 197  Z-score: 171.0  bits: 39.7 E(85289): 0.0088
Smith-Waterman score: 197; 29.9% identity (64.5% similar) in 107 aa overlap (129-232:173-278)

      100       110       120       130       140       150        
pF1KB8 QEIAEMRIPALNAYMKSLLSLPVWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRTRKVK
                                     .::   .:    :  :. ..:   .   :.
NP_001 VSQLAVFIEAALDYHRQSTEILQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVS
            150       160       170       180       190       200  

      160          170       180       190       200       210     
pF1KB8 SVS---PQGNSVDRMAAPRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGA
       ..:     :...  :  :  ..:.::  ... ::.:: ::.: : ..:...: :: ..: 
NP_001 TTSVVKTTGSNIP-MDQPCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGE
            210        220       230       240       250       260 

         220       230       240       250       260       270     
pF1KB8 TGIFPLSFVKILKDFPEEDDPTNWLRCYYYEDTISTIKDIAVEEDLSSTPLLKDLLELTR
       .:.::...:...  .:.                                           
NP_001 SGFFPINYVEVIVPLPQ                                           
             270                                                   

>>XP_016877975 (OMIM: 603362) PREDICTED: endophilin-A3 i  (278 aa)
 initn: 210 init1: 187 opt: 197  Z-score: 171.0  bits: 39.7 E(85289): 0.0088
Smith-Waterman score: 197; 29.9% identity (64.5% similar) in 107 aa overlap (129-232:173-278)

      100       110       120       130       140       150        
pF1KB8 QEIAEMRIPALNAYMKSLLSLPVWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRTRKVK
                                     .::   .:    :  :. ..:   .   :.
XP_016 VSQLAVFIEAALDYHRQSTEILQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVS
            150       160       170       180       190       200  

      160          170       180       190       200       210     
pF1KB8 SVS---PQGNSVDRMAAPRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGA
       ..:     :...  :  :  ..:.::  ... ::.:: ::.: : ..:...: :: ..: 
XP_016 TTSVVKTTGSNIP-MDQPCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGE
            210        220       230       240       250       260 

         220       230       240       250       260       270     
pF1KB8 TGIFPLSFVKILKDFPEEDDPTNWLRCYYYEDTISTIKDIAVEEDLSSTPLLKDLLELTR
       .:.::...:...  .:.                                           
XP_016 SGFFPINYVEVIVPLPQ                                           
             270                                                   




339 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 13:05:48 2016 done: Fri Nov  4 13:05:49 2016
 Total Scan time:  7.960 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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