GENSCAN 1.0	Date run:  4-Nov-116	Time: 12:50:07

Sequence gi568815597f:44113754_44320615 : 206862 bp : 45.91% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5179   5235   57  0  0   70  109    76 0.262   7.27
 1.02 Intr +  15600  15807  208  2  1   76   48    49 0.107  -1.65
 1.03 Intr +  16219  16443  225  2  0   78   72   156 0.234  10.96
 1.04 Term +  16759  17003  245  2  2  107   42   128 0.966   6.16
 1.05 PlyA +  18853  18858    6                               1.05

 2.05 PlyA -  21495  21490    6                               1.05
 2.04 Term -  24258  24068  191  1  2   91   46   120 0.980   5.71
 2.03 Intr -  27926  24911 3016  2  1  111  117  2529 0.946 245.47
 2.02 Intr -  37698  37304  395  1  2   58   39   385 0.451  24.97
 2.01 Init -  58099  57937  163  1  1   82   21   114 0.461   2.00
 2.00 Prom -  67082  67043   40                              -3.36

 3.00 Prom +  89735  89774   40                              -1.76
 3.01 Init +  95540  95613   74  1  2   25   79    81 0.404   1.44
 3.02 Intr +  98977  99158  182  1  2  141   41    40 0.759   4.11
 3.03 Intr +  99996 100105  110  1  2   98   64   158 0.818  14.40
 3.04 Intr + 100597 100692   96  0  0   77   11   138 0.518   5.21
 3.05 Intr + 100987 101145  159  0  0   -6  121   160 0.920  10.08
 3.06 Intr + 104558 104716  159  1  0   50  105   228 0.988  20.88
 3.07 Intr + 104835 105002  168  2  0  107  115   255 0.999  30.24
 3.08 Intr + 105303 105488  186  2  0   88   66   381 0.994  35.79
 3.09 Intr + 105653 105724   72  1  0   93   87    82 0.641   8.20
 3.10 Intr + 106008 106125  118  2  1   67   92   113 0.469   9.64
 3.11 Intr + 106264 106556  293  2  2   90  103   433 0.978  41.85
 3.12 Term + 106806 106865   60  2  0  114   54    82 0.985   5.20
 3.13 PlyA + 106901 106906    6                              -5.99

 4.13 PlyA - 107360 107355    6                               1.05
 4.12 Term - 107887 107805   83  2  2  110   38   182 0.896  13.26
 4.11 Intr - 123291 123106  186  1  0    6   89   115 0.282   3.06
 4.10 Intr - 134285 134186  100  2  1  130   57    89 0.333   9.68
 4.09 Intr - 135172 135149   24  1  0  114   65    20 0.532   0.52
 4.08 Intr - 171154 171082   73  0  1  108   79    50 0.463   5.51
 4.07 Intr - 173140 172993  148  2  1   91   10    50 0.124  -3.21
 4.06 Intr - 180199 180116   84  2  0   64   92    34 0.186   1.19
 4.05 Intr - 181838 181728  111  0  0   81   95    52 0.169   5.55
 4.04 Intr - 188115 187973  143  2  2    6   55    91 0.003  -2.40
 4.03 Intr - 194648 194557   92  2  2   68   84    73 0.032   3.69
 4.02 Intr - 199475 199416   60  2  0  107   92    41 0.252   5.33
 4.01 Intr - 205991 205875  117  2  0   75   94    27 0.252   2.66

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:44113754_44320615|GENSCAN_predicted_peptide_1|244_aa
MEQEAGELSRWQAAHQAAQDNENSAPILNMSSSSGSSGVHTSWNQGLPSIQHFPHSAEML
GSPLVSVEAPGQNVNEGGPQFSMPLPERGSQDSLVSQPDSQEGPFLPEQPGPAPQTVEKN
SRPQEGTGRRGSSEARPYCCNYENCGKAYTKRSHLVSHQRKHTGERPYSCNWESCSWSFF
RSDELRRHMRVHTRYRPYKCDQCSREFMRSDHLKQHQKTHRPGPSDPQANNNNGEQDSPP
AAGP

>gi568815597f:44113754_44320615|GENSCAN_predicted_CDS_1|735_bp
atggaacaggaggctggggagctgagccggtggcaggcggcgcaccaggctgcccaggat
aacgagaactcagcgcccatcttgaacatgtcttcatcttctggaagctctggagtgcac
acctcttggaaccaaggcctaccaagcattcagcactttcctcacagcgcagagatgctg
gggtcccctttggtgtctgttgaggcgccggggcagaatgtgaatgaaggggggccacag
ttcagtatgccactgcctgagcgtggatctcaggactctcttgtcagtcagccagactct
caagaaggcccatttctaccagagcagcccggacctgctccacagacagtagagaagaac
tccaggcctcaggaagggactggtagaaggggctcctcagaggcaaggccttactgctgc
aactacgagaactgcggaaaagcttataccaaacgctcccacctcgtgagccaccagcgc
aagcacacaggtgagaggccatattcttgcaactgggaaagttgttcatggtctttcttc
cgttctgatgagcttagacgacatatgcgggtacacaccagatatcgaccatataaatgt
gatcagtgcagccgggagttcatgaggtctgaccatctcaagcaacaccagaagactcat
cggccgggaccctcagacccacaggccaacaacaacaatggagagcaggacagtcctcct
gctgctggtccttag

>gi568815597f:44113754_44320615|GENSCAN_predicted_peptide_2|1254_aa
MQPGAGILVLGLLLLPQDAPGLSSVASLNCLSHPRHYDWKHVFWKLSSCWDSGTEKLCEY
NKCGKSFCQKESLPTSQKIRTEERPFESKDCGKVLIQKSNFIQYQRMHTEEKPFVYKECG
KTFSGKSNLTEQEKFHIGEKPFKCSECGTAIGQKKKYLIRNHTGEKSYECKECGNIFCQQ
IPLIVDDPITKDLVQSSGNIKEMDSSLLQAIEEIEKFFQHLSERHTEQAETPDAPEPQNC
MPLTAHAEESQHESTQSKTMPPLGSTMMTSACTNIPGTVLTQDLTMHPLKALEDLSETYS
MGQKVTSFDQVKHTAGSQMTDVTVTPKSSPTDCQKTTITASNMTISNESSQLNTPSSDQT
LNESQIPALLGDQMKTLSDNQTLCGDQVTFSSDQTLTDGHTVTSGSDETLSGGQMTTSLD
LYGGQMMTSIDNQTLCGEQMTTSSGNQAFYGRQMTTSTGNQTLCGEQMTTSTGNQALYGG
QMTTSASNQTLCGEQMTTSTSNQTLCGEQVMTSTGNQALCGGQMTTSTGNQNLYGGQMMT
STGNQTLYWGQMMTSTGNQNLCGEQVMTSTGNQALCGGQMTTSTGNQNLYGGQMMTSTGN
QTLYWGQMMTSTGNQNLCGEQVMTSTGNQALCGGQMTTSTGNQNLCGEQVMTSTSNQTLC
GEQTTTSTSNQTLCGEQVTTSTGNQALYGGQMMTSTGNQTLYWGQMMTSTGNQNLCGEQM
TTSTGNQALYGGQMTTSTSNQTLCGEQMTTPTSNQTLCGEQVTTSTGNQALYGGQITTST
SNQTLCGEQMTTSTSNQTLCGEQVTTSTGNQALYGGQMMTSTGNQALYGGQMTTSASNQT
LCGEQMTTSTSNQTLCEEQVMTSTGNQALCGEQMTTSTGNQALYGGQMTTSTSNQTLCGE
QTTTSTSNQTLCGEQVTTSTGNQALYGGQMMTSTGNQTLYWGQMMTSTGNQNLCGEQMTT
STGNQALYGGQMTTSTSNQTLCGEQMTTPTSNQTLCGEQVTTSTGNQALYRGQITTSTSN
QTLCGEQMTTSTSNQTLCGEQVTTSTGNQALYGGQMMTSTGNQNLYGGQNMTSTDNQALY
GGQMATYSGNQTLYGDQMLTLQVGNMTTLTDDHSLYGGYMMSHQFSSLPYPGFLCFSSSH
LIQGQLPKQKTQSCQFWKNPEVSRPYVCTYEDCKMSYSKACHLRTHMRKHTGEKPYVCDV
EGCTWKFARSDELNRHKKRHTGERPYLCSICSKNFARSDHLKQHAKVHNIRPGL

>gi568815597f:44113754_44320615|GENSCAN_predicted_CDS_2|3765_bp
atgcagcctggggctggcatccttgttctgggcctgctgctcctgcctcaggacgcccca
ggcctgtcctcagtggcttccctgaactgcctctcccaccccaggcattatgactggaaa
catgttttctggaagctaagcagctgctgggactcagggactgagaagctttgtgaatat
aacaaatgtggaaaatccttttgccagaaggaaagtctccctaccagtcagaaaattcgc
actgaagagagaccttttgagagtaaagactgtgggaaagttctcattcagaagtcaaac
ttcatccagtaccagagaatgcacacagaagagaaaccctttgtgtataaggagtgtgga
aaaacctttagtggaaaatcaaaccttactgagcaagagaaatttcatattggagagaaa
ccctttaaatgtagtgaatgtggaacagctattggccagaagaagaagtacctcataaga
aaccatactggagagaaatcctatgagtgtaaggaatgtggaaacatcttctgtcagcaa
ataccacttattgtagatgatcccataactaaagatctagttcagtcatcaggcaacatc
aaagagatggattccagtcttctccaggcaattgaggaaattgagaaatttttccagcat
ctctctgagcggcatacagaacaggcagaaaccccagatgcaccagaaccacagaactgt
atgcctctgactgcccatgctgaggagagccaacatgagtcaacccagagcaagacgatg
cctcccttggggtccacaatgatgacttctgcatgcactaacatccctgggacagttctc
acccaggacttaacaatgcaccctcttaaagcccttgaagacctaagtgagacttattcc
atgggccagaaagtgacttcctttgatcaggtaaaacacacagcaggctcccagatgaca
gatgttactgtcaccccaaagtcatcacccactgattgccagaagacaaccatcactgca
agcaacatgacaatctccaatgaaagtagccagctgaacaccccaagcagtgaccagacc
ctcaatgagagtcagataccagccctgcttggagatcagatgaagaccctcagtgataac
cagactctctgtggggaccaggtgaccttcagtagtgaccagaccctcactgatggtcat
acagtgacttccggtagcgatgagaccctctctgggggccaaatgacaaccagtctagac
ctctatggagggcaaatgatgacttccattgataaccagaccctctgtggggagcagatg
acgacctccagtggtaaccaggccttctacgggagacagatgacgacctccactggtaac
cagaccctctgtggagagcagatgacaacctccactggtaaccaggccctctatgggggg
cagatgacgacctccgctagtaaccagaccctctgtggagagcagatgacaacctccact
agtaaccagaccctctgtggggagcaagtgatgacctccactggtaaccaagccctctgt
ggagggcagatgacgacctccactggtaaccagaacctctatggggggcagatgatgacc
tccactggtaaccagaccctctactgggggcagatgatgacctccactggtaaccagaac
ctctgtggagagcaagtgatgacctccactggtaaccaagccctctgtggagggcagatg
acgacctccactggtaaccagaacctctatggggggcagatgatgacctccactggtaac
cagaccctctactgggggcagatgatgacctccactggtaaccagaacctctgtggagag
caagtgatgacctccactggtaaccaagccctctgtggagggcagatgacgacctccact
ggtaaccagaacctctgtggagagcaagtgatgacctccactagtaaccagaccctctgt
ggagagcagacgacgacctccactagtaaccagaccctctgtggggagcaggtgacgacc
tccactggtaaccaggccctctacggggggcagatgatgacctccactggtaaccagacc
ctctactgggggcagatgatgacctccactggtaaccagaacctctgtggagagcagatg
acaacctccactggtaaccaggccctctacggggggcagatgacaacctctactagtaac
cagaccctctgtggagagcagatgacgacccccactagtaaccagaccctctgtggggag
caggtgacgacctccactggtaaccaggccctctacggggggcagatcacgacctccact
agtaaccagaccctctgtggagagcagatgacgacctccactagtaaccagaccctttgt
ggggagcaggtgacgacctccactggtaaccaggccctctatggggggcagatgatgacc
tccactggtaaccaggccctctacggggggcagatgacaacctctgctagtaaccagacc
ctctgtggagagcagatgacaacctccactagtaaccagaccctctgtgaggagcaggtg
atgacctccactggtaaccaggccctctgtggagagcagatgacaacctccactggtaac
caggccctctacggggggcagatgacgacctccactagtaaccagaccctctgtggagag
cagacgacgacctccactagtaaccagaccctctgtggggagcaggtgacgacctccact
ggtaaccaggccctctatggggggcagatgatgacctccactggtaaccagaccctctac
tgggggcagatgatgacctccactggtaaccagaacctctgtggagagcagatgacaacc
tccactggtaaccaggccctctacggggggcagatgacgacctctactagtaaccagacc
ctctgtggagagcagatgacgacccccactagtaaccagaccctctgtggggagcaggtg
acgacctccactggtaaccaggccctctacagggggcagatcacgacctccactagtaac
cagaccctctgtggagagcagatgacgacctccactagtaaccagaccctctgtggggag
caggtgacgacctccactggtaaccaggccctctatggggggcagatgatgacctccact
ggtaaccagaacctctacggggggcagaatatgacctccactgataaccaggccctctat
ggaggccagatggcaacatatagtggcaaccagaccctctatggggaccagatgctgact
cttcaggtgggcaatatgacaacgctcactgatgaccacagcctttatgggggatatatg
atgtcccatcagttctcatcattgccatacccaggattcctatgcttttcaagttcccat
ttgattcaaggacaactcccaaaacagaagacacagagctgccagttctggaagaatcct
gaggtttcaaggccctatgtctgcacttacgaggactgcaagatgtcttattcaaaggct
tgccacctccgaacccacatgcgcaagcacaccggggagaagccctatgtatgcgatgta
gagggatgtacgtggaaatttgcccgctcagatgagctcaacagacacaagaaaaggcac
actggggaaaggccctacctgtgttcaatatgcagcaagaattttgcaagatctgatcac
ctaaagcagcatgcaaaggtccacaacattcgcccaggattatga

>gi568815597f:44113754_44320615|GENSCAN_predicted_peptide_3|558_aa
MRVLLEISIAKIGNKVVFATASVVRKIPRFIPLRDTSKLVPAWGCVLGFFVAQRVQLAPV
LVKCHEAGLQEIPTRPQPTAISIRGGAMATGADVRDILELGGPEGDAASGTISKKDIINP
DKKKSKKSSETLTFKRPEGMHREVYALLYSDKKQGYRTVKAKLGSKKVRPWKWMPFTNPA
RKDGAMFFHWRRAAEEGKDYPFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLS
RRFDLRFVVIHDRYDHQQFKKRSVEDLKERYYHICAKLANVRAVPGTDLKIPVFDAGHER
RRKEQLERLYNRTPEQVAEEEYLLQELRKIEARKKEREKRSQDLQKLITAADTTAEQRRT
ERKAPKKKLPQKKEAEKPAVPETAGIKFPDFKSAGVTLRSQRPLVAGTGLACQLSLQMKL
PSSVGQKKIKALEQMLLELGVELSPTPTEELVHMFNELRSDLVLLYELKQACANCEYELQ
MLRHRHEALARAGVLGGPATPASGPGPASAEPAVTEPGLGPDPKDTIIDVVGAPLTPNSR
KRRESASSSSSVKKAKKP

>gi568815597f:44113754_44320615|GENSCAN_predicted_CDS_3|1677_bp
atgagagttctgttggagatcagcattgcaaaaatcgggaataaagttgtctttgctaca
gcatcagtagtaaggaagatccccaggtttattcccttgagggatacttctaagctggtt
cctgcttggggctgtgttttgggcttcttcgtagcccaaagagtgcagctagctcctgta
ctagtgaagtgccacgaagctggcctccaggaaatccccacgaggccacaacccacagct
atctccatcagaggaggcgcgatggctacgggcgcggatgtacgggacattctagaactc
gggggtccagaaggggatgcagcctctgggaccatcagcaagaaggacattatcaacccg
gacaagaaaaaatccaagaagtcctctgagacactgactttcaagaggcccgagggcatg
caccgggaagtctatgccttgctctactctgacaagaagcaaggataccgtacagtgaag
gccaagttgggctccaagaaggtgcggccttggaagtggatgccattcaccaacccggcc
cgcaaggacggagcaatgttcttccactggcgacgtgcagcggaggagggcaaggactac
ccctttgccaggttcaataagactgtgcaggtgcctgtgtactcggagcaggagtaccag
ctttatctccacgatgatgcttggactaaggcagaaactgaccacctctttgacctcagc
cgccgctttgacctgcgttttgttgttatccatgaccggtatgaccaccagcagttcaag
aagcgttctgtggaagacctgaaggagcggtactaccacatctgtgctaagcttgccaac
gtgcgggctgtgccaggcacagaccttaagataccagtatttgatgctgggcacgaacga
cggcggaaggaacagcttgagcgtctctacaaccggaccccagagcaggtggcagaggag
gagtacctgctacaggagctgcgcaagattgaggcccggaagaaggagcgggagaaacgc
agccaggacctgcagaagctgatcacagcggcagacaccactgcagagcagcggcgcacg
gaacgcaaggcccccaaaaagaagctaccccagaaaaaggaggctgagaagccggctgtt
cctgagactgcaggcatcaagtttccagacttcaagtctgcaggtgtcacgctgcggagc
caacggcctcttgtggctgggacaggcttagcttgccagctttcattgcagatgaagctg
ccaagctctgtgggacagaagaagatcaaggccctggaacagatgctgctggagcttggt
gtggagctgagcccgacacctacggaggagctggtgcacatgttcaatgagctgcgaagc
gacctggtgctgctctacgagctcaagcaggcctgtgccaactgcgagtatgagctgcag
atgctgcggcaccgtcatgaggcactggcccgggctggtgtgctagggggccctgccaca
ccagcatcaggcccaggcccggcctctgctgagccggcagtgactgaacccggacttggt
cctgaccccaaggacaccatcattgatgtggtgggcgcacccctcacgcccaattcgaga
aagcgacgggagtcggcctccagctcatcttccgtgaagaaagccaagaagccgtga

>gi568815597f:44113754_44320615|GENSCAN_predicted_peptide_4|406_aa
EIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLER
VDEWMAKEGLLDPNVKSIFVTCGDWDLKVMPTTTYVASRVQGDLSKSVRSTSETWIAKGP
NFSFYLEDRNSSSAIGVGILLEIAIEGADPSISRKCWHSGSSLKSAPVESCSGPWLSLPG
WVHPGLEPSPVLHGSRDPCQARGTLEVDKDMWLGEGNSDGSFLDSQILEGFCEEKMEVLF
SVFSKDILWTHGLPGQCQYLGLPVADYFKQWINLKKVEVAGSQVAYSFAMGCWPKNGLLD
MNKGLSLQHIGRPHSGIAHLRVNALDYLKGGQEEQVGLLESLEEVGLARGTALEGHKHKI
KKSPVAQVGRGSGSACFGGDDCKNIANIMKTLAYRGFIFKQTSKPF

>gi568815597f:44113754_44320615|GENSCAN_predicted_CDS_4|1221_bp
gaaatcatcgagttccccatcctaaagctaaatggccggaccatggagattgagtctacc
tttcacatgtatgtccagcctgtagtccatccacagcttaccccattctgtacagagctc
accgggattattcaagccatggtggatggtcagccaagcctgcagcaagtgctggagagg
gtcgatgaatggatggcgaaggaaggcctcttagatccaaacgtcaagtcaatttttgtc
acctgtggagactgggacttaaaagtcatgcctacaaccacctatgtggctagcagagtg
cagggtgacctttccaagtctgtgagaagtacatcggaaacttggatagccaaaggcccc
aatttctctttttacctagaagaccgcaattcctcctcagccattggagtgggaatcctg
ttggaaattgccattgaaggtgctgaccccagcatatcccggaagtgctggcattccggt
agtagcctaaagtcagcacctgttgagagctgctctgggccctggctttctctgcccggc
tgggttcaccctggcctggagcccagcccagtgttacatggcagccgtgacccgtgccag
gccagaggaactcttgaagttgataaggatatgtggcttggagaagggaactctgatgga
agctttctggactctcagatcttggaagggttctgtgaggaaaagatggaagtattgttc
tctgtgttttctaaagacatactttggacccatgggctcccaggccagtgccagtacttg
ggcttgccagtggcggattacttcaagcagtggattaatctgaaaaaggtggaggttgct
ggcagccaggtggcttacagcttcgccatgggctgctggcccaagaatggacttctagac
atgaacaagggcctcagcctgcaacacataggccggccccacagcggcattgcccatttg
agggttaatgcccttgactacctcaagggtgggcaagaagagcaagtaggactcctggag
tccctggaggaggtgggcctagcacgagggacagccttagaaggccacaagcacaagatc
aagaaatcaccagttgctcaagttggcagaggtagtgggagtgcatgttttggaggtgac
gactgcaagaacattgccaacatcatgaagacactcgcctatcgaggcttcatcttcaag
cagacatcgaagccgttctga