GENSCAN 1.0	Date run:  4-Nov-116	Time: 12:33:38

Sequence gi568815596f:15842065_16046094 : 204030 bp : 45.24% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    158    153    6                               1.05
 1.04 Term -   1602   1442  161  1  2   51   44   116 0.392   1.60
 1.03 Intr -   2269   2153  117  2  0   79   39    97 0.637   4.34
 1.02 Intr -   4273   4224   50  0  2   84  100   -13 0.246  -2.18
 1.01 Init -   4983   4901   83  0  2   88   94    85 0.724   7.55
 1.00 Prom -  10496  10457   40                              -3.36

 2.00 Prom +  27088  27127   40                              -3.36
 2.01 Sngl +  27875  28192  318  1  0  115   35   366 0.970  29.97
 2.02 PlyA +  28200  28205    6                               1.05

 3.00 Prom +  28246  28285   40                              -5.66
 3.01 Init +  29870  29924   55  1  1   77  114   -26 0.286   0.35
 3.02 Intr +  33429  33611  183  1  0   94   80    17 0.169   1.26
 3.03 Intr +  40971  41088  118  1  1   82   67    87 0.062   5.52
 3.04 Intr +  56077  56314  238  1  1  -30   94   164 0.003   2.82
 3.05 Intr +  70140  70325  186  2  0   21   72   130 0.609   4.59
 3.06 Intr +  70426  70537  112  0  1   63   87    62 0.907   3.55
 3.07 Term +  71898  72076  179  1  2   82   52    73 0.725   0.95
 3.08 PlyA +  74288  74293    6                               1.05

 4.04 PlyA -  75134  75129    6                               1.05
 4.03 Term -  83130  83055   76  2  1   80   48    71 0.854  -0.39
 4.02 Intr -  85513  85415   99  0  0  126  121    17 0.920   8.03
 4.01 Init -  89736  89654   83  0  2   66  119    33 0.804   4.64
 4.00 Prom -  98351  98312   40                              -5.96

 5.00 Prom +  99938  99977   40                              -1.46
 5.01 Init + 100025 100790  766  1  1  102  103  1008 0.400  98.56
 5.02 Term + 103429 104033  605  2  2   41   42   866 0.945  71.98
 5.03 PlyA + 104920 104925    6                               1.05

 6.00 Prom + 118578 118617   40                              -4.56
 6.01 Sngl + 119310 119921  612  2  0   42   39   175 0.354   4.20
 6.02 PlyA + 120325 120330    6                               1.05

 7.10 PlyA - 121121 121116    6                               1.05
 7.09 Term - 127810 127794   17  2  2  135   47    -3 0.198  -1.30
 7.08 Intr - 148180 148017  164  0  2   41   91   150 0.343  10.22
 7.07 Intr - 155545 155467   79  2  1   61   76    59 0.094   0.61
 7.06 Intr - 166789 166741   49  1  1   60   97    63 0.132   2.65
 7.05 Intr - 171327 171111  217  2  1   35   23   143 0.063   1.01
 7.04 Intr - 175702 175545  158  1  2   51   68   152 0.419   8.31
 7.03 Intr - 176998 176962   37  0  1   50   98    16 0.137  -2.94
 7.02 Intr - 179921 179843   79  0  1   54  107    61 0.075   3.21
 7.01 Init - 184687 184648   40  1  1   87  100     8 0.754   2.33
 7.00 Prom - 185571 185532   40                              -4.56

 8.00 Prom + 187800 187839   40                              -0.46
 8.01 Init + 196715 196788   74  1  2   61   59   137 0.648   7.29
 8.02 Intr + 197770 197944  175  1  1  106   63     0 0.550  -0.76
 8.03 Intr + 199874 199951   78  1  0   54  110    41 0.675   2.65
 8.04 Intr + 200673 200717   45  2  0   98  116    30 0.816   5.41

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:15842065_16046094|GENSCAN_predicted_peptide_1|136_aa
MIPKVVAQVRTLCLWGSMARLNPPPCSSPPALGTHLRARGPRSASVSMETGEGRQCTKVI
LRVLIGVTAPHPSVPPEGRDLEAGVGFWQAPASPMGSPDGRVSSAEKGDLRPVLLLGPPW
PCWHLRAFSPLIDASD

>gi568815596f:15842065_16046094|GENSCAN_predicted_CDS_1|411_bp
atgatacctaaggtggtggctcaggtgcggaccctctgcctctggggctcaatggccagg
ctgaatcctccaccctgcagcagccctccagcactgggcactcacctccgtgcaagaggc
cccaggagtgccagtgtttccatggaaacaggagaaggaaggcagtgcaccaaggtgata
ctccgggtgctcattggtgtgaccgccccccatccatcagttccacctgagggcagagac
ctggaggcgggagtaggcttctggcaggcaccggccagccccatgggcagcccagatggc
agagtgtcttctgccgaaaagggggacctgcggccggtgcttctgctggggcctccgtgg
ccctgctggcatctgcgggccttttctcccctcatagatgcttcagactga

>gi568815596f:15842065_16046094|GENSCAN_predicted_peptide_2|105_aa
MASISRLTCISSDLILHNDEVTVTEDKIDALIKAGGVNVELFWPSLLAKALASVNIGSLI
CNVGAGGPAPVAGAAPAEEESGSKERRIRGSDDDMGFGFLTKPLS

>gi568815596f:15842065_16046094|GENSCAN_predicted_CDS_2|318_bp
atggcctccatctcccggcttacctgcatctcctcggacctcattctgcacaacgatgaa
gtgaccgtcacggaggataagatcgatgccctcattaaagcaggcggtgtaaatgttgaa
ctgttttggcctagcttgttggcaaaggccctggccagcgtcaacattgggagcctcatc
tgcaatgtaggagctggtggacctgctccagtagctggtgctgctccagctgaggaagaa
agtggaagcaaagaaagaagaatccgaggatctgatgatgacatgggctttgggtttttg
actaaacctctttcataa

>gi568815596f:15842065_16046094|GENSCAN_predicted_peptide_3|356_aa
MWNCESINPPSFINYPASAPSCIPGLSQDWVGSCERSEHSDVFQELCGPGAKVHQLPRGT
GSPGEGEVLSDKCWDHRLLEIFRLINKEGLIEHNHFATLDEIKDLGNDYQKLQKGEKIRP
VKQIEPYRQGEHIQTEAKGFFEFEEMKRHIWGNVLEKPREPTFIELNTRVQSAAQKGNFK
DLKRVPLRIQLSTYQCVQKVEDKTEKKIGTKMENPRDGSRWPGSWHTALEEAAFPWETAK
ESFQDSSWASGEPVPADYCKAAFHAYDIISQKHLLFGNFSFLNISPLDEKQEVKEGQTVP
PKCIMEVLPIAKHAWGNQCSTATRDGVLVVNWLMSDQTSKSHTQSASSNPSWHQHL

>gi568815596f:15842065_16046094|GENSCAN_predicted_CDS_3|1071_bp
atgtggaactgtgagtccattaaccctccttcctttataaattacccagcctcggccccc
agttgcatcccagggttgtctcaggactgggtggggtcctgtgagagaagtgagcacagt
gatgtcttccaagagctctgcggaccaggagcaaaggtccaccagctgcccagaggaaca
ggcagtccaggcgagggagaggtgctcagtgataagtgttgggaccataggctgctggaa
atattccggttaataaataaagaaggactaatagaacataaccattttgcgacccttgat
gaaataaaagatctaggtaacgactatcaaaaattgcaaaaaggagagaaaatcagacca
gtgaaacaaatagagccttacaggcagggagaacacatccagacagaagccaagggcttc
tttgagtttgaggagatgaagcggcacatctggggaaatgtcctggaaaaaccaagggag
ccaacattcatagaattgaatacccgtgtacagagcgctgcacagaaagggaacttcaaa
gatctgaagagagttcctttaagaattcaattgagtacttaccagtgcgtacagaaagtg
gaggacaagactgaaaagaagataggaaccaagatggaaaatcccagagacgggagccgc
tggccaggttcctggcacacagcgttggaagaagcagccttcccctgggaaaccgccaag
gagtcattccaggacagcagctgggcttccggagaaccggtgcccgctgactactgtaag
gctgcctttcatgcttacgacataatctctcaaaaacatctcctgtttggtaacttcagt
tttctgaacatctcccctttagatgagaagcaagaggtgaaagaagggcaaactgttcca
cccaagtgtatcatggaagttttaccaattgcaaagcatgcctgggggaatcagtgctcc
actgccacaagggatggggtcctcgtggtcaactggctgatgagtgatcaaacttcaaaa
tcccatacacagtctgcttcctcaaacccttcctggcaccaacatctctga

>gi568815596f:15842065_16046094|GENSCAN_predicted_peptide_4|85_aa
MYGVPKTRLFGMDTFESSYNAYNGHISCGVSASVNLSFLLFKMGIVGTSLLAGLQPLPKA
RSQFLEESSYGKWNFAVAPESEIYS

>gi568815596f:15842065_16046094|GENSCAN_predicted_CDS_4|258_bp
atgtatggagttcctaaaacaaggctgtttgggatggacacgtttgaatcctcttacaat
gcttataatggtcatatttcctgcggcgtgtcagcttctgtgaatctcagtttcctcctc
tttaaaatgggaatcgtgggcacctctctccttgcaggactgcagccattgccaaaagca
aggagtcagttcttggaggaatcttcctatgggaaatggaattttgctgttgctccagaa
agtgaaatttacagctga

>gi568815596f:15842065_16046094|GENSCAN_predicted_peptide_5|456_aa
MPGMICKNPDLEFDSLQPCFYPDEDDFYFGGPDSTPPGEDIWKKFELLPTPPLSPSRGFA
EHSSEPPSWVTEMLLENELWGSPAEEDAFGLGGLGGLTPNPVILQDCMWSGFSAREKLER
AVSEKLQHGRGPPTAGSTAQSPGAGAASPAGRGHGGAAGAGRAGAALPAELAHPAAECVD
PAVVFPFPVNKREPAPVPAAPASAPAAGPAVASGAGIAAPAGAPGVAPPRPGGRQTSGGD
HKALSTSGEDTLSDSDDEDDEEEDEEEEIDVVTVEKRRSSSNTKAVTTFTITVRPKNAAL
GPGRAQSSELILKRCLPIHQQHNYAAPSPYVESEDAPPQKKIKSEASPRPLKSVIPPKAK
SLSPRNSDSEDSERRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATE
YVHSLQAEEHQLLLEKEKLQARQQQLLKKIEHARTC

>gi568815596f:15842065_16046094|GENSCAN_predicted_CDS_5|1371_bp
atgccgggcatgatctgcaagaacccagacctcgagtttgactcgctacagccctgcttc
tacccggacgaagatgacttctacttcggcggccccgactcgacccccccgggggaggac
atctggaagaagtttgagctgctgcccacgcccccgctgtcgcccagccgtggcttcgcg
gagcacagctccgagcccccgagctgggtcacggagatgctgcttgagaacgagctgtgg
ggcagcccggccgaggaggacgcgttcggcctggggggactgggtggcctcacccccaac
ccggtcatcctccaggactgcatgtggagcggcttctccgcccgcgagaagctggagcgc
gccgtgagcgagaagctgcagcacggccgcgggccgccaaccgccggttccaccgcccag
tccccgggagccggcgccgccagccctgcgggtcgcgggcacggcggggctgcgggagcc
ggccgcgccggggccgccctgcccgccgagctcgcccacccggccgccgagtgcgtggat
cccgccgtggtcttcccctttcccgtgaacaagcgcgagccagcgcccgtgcccgcagcc
ccggccagtgccccggcggcgggccctgcggtcgcctcgggggcgggtattgccgcccca
gccggggccccgggggtcgcccctccgcgcccaggcggccgccagaccagcggcggcgac
cacaaggccctcagtacctccggagaggacaccctgagcgattcagatgatgaagatgat
gaagaggaagatgaagaggaagaaatcgacgtggtcactgtggagaagcggcgttcctcc
tccaacaccaaggctgtcaccacattcaccatcactgtgcgtcccaagaacgcagccctg
ggtcccgggagggctcagtccagcgagctgatcctcaaacgatgccttcccatccaccag
cagcacaactatgccgccccctctccctacgtggagagtgaggatgcacccccacagaag
aagataaagagcgaggcgtccccacgtccgctcaagagtgtcatccccccaaaggctaag
agcttgagcccccgaaactctgactcggaggacagtgagcgtcgcagaaaccacaacatc
ctggagcgccagcgccgcaacgaccttcggtccagctttctcacgctcagggaccacgtg
ccggagttggtaaagaatgagaaggccgccaaggtggtcattttgaaaaaggccactgag
tatgtccactccctccaggccgaggagcaccagcttttgctggaaaaggaaaaattgcag
gcaagacagcagcagttgctaaagaaaattgaacacgctcggacttgctag

>gi568815596f:15842065_16046094|GENSCAN_predicted_peptide_6|203_aa
MIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANVILNRQKLEAFPLK
TGTRQACPLSPLLFNIVLEVLARTIRQEKEIKGIQLEEKEVKLSLFADDMIIYLENPNVS
APNLLKLISNFSKVSGYKINVQKSQAFLYTNNRKTESQIMSELPFTIASKKIKHLGMQLT
RDEKDLFKENYKPLLNKIKEDTN

>gi568815596f:15842065_16046094|GENSCAN_predicted_CDS_6|612_bp
atgattatctcaatagatgcagaaaaggcctttgacaaaattcaacagcccttcatgcta
aaaactctcaataaactaggtattgatgggatgtatctcaaaataataagagctatttat
gacaaacccacagccaatgtcatactgaataggcaaaaactggaagcattccctttgaaa
actggcacaagacaggcatgccctctctcaccactcctattcaacatagtgttggaagtt
ctggccaggacaatcaggcaggagaaagaaataaagggtattcaattagaagaaaaggaa
gtcaaattgtccctgtttgcagatgacatgattatatatttagaaaaccccaacgtctca
gccccaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaat
gtgcaaaaatcacaagcattcctatacaccaataacagaaaaacagagagccaaatcatg
agtgaactcccattcacaattgcttcaaagaaaataaaacacctgggaatgcaacttaca
agggatgagaaggacctcttcaaggagaactacaaaccactgctcaacaaaataaaagag
gacacaaactaa

>gi568815596f:15842065_16046094|GENSCAN_predicted_peptide_7|279_aa
MAMSFVEISQLIQGNSNPEKAELSKFPQHNGDLGGKKDTSSAMVPSNHKAPKPIALVASG
LEQREEAKESIIVREQVAMPVDDNVMATLVHTLKLPETSLCPNARGCGRSTRGAGGVVAV
AAALRPDWPSVCKSQQTQQTCISLAGLAGCALGNYQCTSGLCAHGRALWVPSTCTSEGLP
SLTYKTDNYIAAEGHTDETWRDQNVNPDLFPLSFTTTGLSPQKTFCFITCTDPKVTRLSP
LKELALYALSLMTEAEALCPAEDAGNLYEDDGCIGLPIP

>gi568815596f:15842065_16046094|GENSCAN_predicted_CDS_7|840_bp
atggccatgtcatttgtagaaatttcacagctgattcaaggaaacagcaacccggagaaa
gcagaattgtccaagtttccacagcacaatggtgaccttgggggcaaaaaagacacaagt
tctgccatggtcccaagtaaccacaaagccccgaagcccatagctttggtggcctctggc
ctggagcagagagaagaagccaaggaaagcatcatagtaagagaacaagttgctatgccc
gttgatgacaatgtcatggctacacttgtccatacgttaaaattgcctgagactagcttg
tgccccaacgccaggggctgcggccggtctacccggggcgcgggcggcgttgtcgcggtg
gcggcggccctgcgccccgactggccatctgtatgcaaatctcagcagacccagcaaact
tgcatcagcctggccggcctggcgggctgtgcactcggcaattatcagtgcacatcgggc
ctttgtgcccacggccgggctttgtgggtgcccagcacctgcacctcggagggactcccc
tccctcacctataaaacagacaactacatcgcagcagaaggtcacacggatgaaacatgg
agggaccagaatgtgaatcctgatctgtttccactctcattcactacaacaggcttgagc
ccccagaaaaccttctgcttcatcacatgcactgaccccaaagtcaccaggctttcccct
ctcaaggaacttgcactctatgccttgtctctcatgacagaagcagaggccttgtgccca
gcagaagatgccgggaatctttatgaggatgatggatgcattggcctccctattccctga

>gi568815596f:15842065_16046094|GENSCAN_predicted_peptide_8|124_aa
MEFSDPFQLFLAAALKLSAARRVAGNILFLDVTALGTICTLCTMEDEHLASFISVPVSIP
LAPAPVPDPELVLLLLRPGFIMKVFAWMVMPFTGMEDTRDDERGFWGKRVEIHQNEILQN
QDSK

>gi568815596f:15842065_16046094|GENSCAN_predicted_CDS_8|372_bp
atggagttcagtgacccgttccagctgtttctggcggcagcgctgaagctgtcggcagcc
cggcgggtggcaggcaacatattgtttcttgatgtgacagctttaggaacaatctgtaca
ctttgcaccatggaagatgaacatttagcttcttttatatcggtccctgtctcaatacca
ctggcgccagcgccagtgcctgatcctgaactagttttgctacttctcagacccggcttc
atcatgaaggtatttgcctggatggtgatgccattcactggaatggaggacacaagagat
gatgagagaggtttttggggaaaaagggtggagattcaccagaatgagatattgcagaac
caggattcaaag