Result of FASTA (omim) for pF1KB8390
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8390, 398 aa
  1>>>pF1KB8390 398 - 398 aa - 398 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 13.6566+/-0.000443; mu= -16.8385+/- 0.028
 mean_var=845.7837+/-192.197, 0's: 0 Z-trim(125.9): 386  B-trim: 2681 in 1/61
 Lambda= 0.044101
 statistics sampled from 49746 (50745) to 49746 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.842), E-opt: 0.2 (0.595), width:  16
 Scan time:  8.730

The best scores are:                                      opt bits E(85289)
NP_001003845 (OMIM: 609391) transcription factor S ( 398) 2847 195.9 1.5e-49
XP_005246599 (OMIM: 609391) PREDICTED: transcripti ( 442) 2755 190.1 9.1e-48
XP_011509461 (OMIM: 609391) PREDICTED: transcripti ( 454) 2746 189.5 1.4e-47
NP_001313472 (OMIM: 600540) transcription factor S ( 471)  746 62.3 2.8e-09
XP_005249885 (OMIM: 600540) PREDICTED: transcripti ( 767)  746 62.6 3.8e-09
NP_001313471 (OMIM: 600540) transcription factor S ( 767)  746 62.6 3.8e-09
NP_003103 (OMIM: 600540) transcription factor Sp4  ( 784)  746 62.6 3.9e-09
NP_001017371 (OMIM: 601804) transcription factor S ( 713)  700 59.6 2.8e-08
NP_001166183 (OMIM: 601804) transcription factor S ( 778)  700 59.6 2.9e-08
NP_003102 (OMIM: 601804) transcription factor Sp3  ( 781)  700 59.6 2.9e-08
NP_001238754 (OMIM: 189906) transcription factor S ( 737)  693 59.2 3.9e-08
XP_011536998 (OMIM: 189906) PREDICTED: transcripti ( 778)  693 59.2   4e-08
NP_003100 (OMIM: 189906) transcription factor Sp1  ( 778)  693 59.2   4e-08
NP_612482 (OMIM: 189906) transcription factor Sp1  ( 785)  693 59.2   4e-08
NP_945194 (OMIM: 608306) transcription factor Sp8  ( 490)  653 56.4 1.8e-07
NP_001245177 (OMIM: 608613) transcription factor S ( 376)  649 56.0 1.8e-07
XP_006722178 (OMIM: 608613) PREDICTED: transcripti ( 376)  649 56.0 1.8e-07
NP_954871 (OMIM: 608613) transcription factor Sp6  ( 376)  649 56.0 1.8e-07
NP_874359 (OMIM: 608306) transcription factor Sp8  ( 508)  653 56.4 1.8e-07
NP_001287766 (OMIM: 606633,613849) transcription f ( 413)  605 53.2 1.3e-06
XP_011536202 (OMIM: 606633,613849) PREDICTED: tran ( 413)  605 53.2 1.3e-06
NP_001166938 (OMIM: 606633,613849) transcription f ( 431)  605 53.3 1.4e-06
NP_690599 (OMIM: 606633,613849) transcription fact ( 431)  605 53.3 1.4e-06
NP_003101 (OMIM: 601801) transcription factor Sp2  ( 613)  569 51.2 8.2e-06
XP_006722090 (OMIM: 601801) PREDICTED: transcripti ( 660)  569 51.2 8.6e-06
XP_011523444 (OMIM: 601801) PREDICTED: transcripti ( 660)  569 51.2 8.6e-06
XP_016880458 (OMIM: 601801) PREDICTED: transcripti ( 660)  569 51.2 8.6e-06
XP_016880457 (OMIM: 601801) PREDICTED: transcripti ( 660)  569 51.2 8.6e-06
XP_006722088 (OMIM: 601801) PREDICTED: transcripti ( 660)  569 51.2 8.6e-06
XP_006722089 (OMIM: 601801) PREDICTED: transcripti ( 660)  569 51.2 8.6e-06
XP_011523445 (OMIM: 601801) PREDICTED: transcripti ( 660)  569 51.2 8.6e-06
XP_006722086 (OMIM: 601801) PREDICTED: transcripti ( 667)  569 51.2 8.6e-06
XP_011523442 (OMIM: 601801) PREDICTED: transcripti ( 717)  569 51.3   9e-06
XP_011523441 (OMIM: 601801) PREDICTED: transcripti ( 727)  569 51.3 9.1e-06
XP_011523440 (OMIM: 601801) PREDICTED: transcripti ( 760)  569 51.3 9.3e-06
XP_011523439 (OMIM: 601801) PREDICTED: transcripti ( 768)  569 51.3 9.4e-06
XP_011523438 (OMIM: 601801) PREDICTED: transcripti ( 771)  569 51.3 9.4e-06
XP_011513788 (OMIM: 600540) PREDICTED: transcripti ( 711)  565 51.0 1.1e-05
XP_005249886 (OMIM: 600540) PREDICTED: transcripti ( 706)  541 49.5 3.1e-05
NP_619638 (OMIM: 609393) Krueppel-like factor 14 [ ( 323)  514 47.3 6.3e-05
NP_114124 (OMIM: 606139) Krueppel-like factor 16 [ ( 252)  501 46.3 9.6e-05
NP_057079 (OMIM: 605328,612001) Krueppel-like fact ( 288)  477 44.9  0.0003
NP_001171189 (OMIM: 603301,610508) Krueppel-like f ( 495)  476 45.1 0.00043
NP_001171187 (OMIM: 603301,610508) Krueppel-like f ( 495)  476 45.1 0.00043
NP_003588 (OMIM: 603301,610508) Krueppel-like fact ( 512)  476 45.2 0.00044
NP_001027453 (OMIM: 601878) Krueppel-like factor 1 ( 469)  465 44.4 0.00068
NP_001197 (OMIM: 602902) Krueppel-like factor 9 [H ( 244)  456 43.5 0.00069
NP_005646 (OMIM: 601878) Krueppel-like factor 10 i ( 480)  465 44.4 0.00069
XP_011525944 (OMIM: 111150,600599,613566,613673) P ( 324)  452 43.4 0.00097
NP_006554 (OMIM: 111150,600599,613566,613673) Krue ( 362)  452 43.4   0.001


>>NP_001003845 (OMIM: 609391) transcription factor Sp5 [  (398 aa)
 initn: 2847 init1: 2847 opt: 2847  Z-score: 1010.7  bits: 195.9 E(85289): 1.5e-49
Smith-Waterman score: 2847; 100.0% identity (100.0% similar) in 398 aa overlap (1-398:1-398)

               10        20        30        40        50        60
pF1KB8 MAAVAVLRNDSLQAFLQDRTPSASPDLGKHSPLALLAATCSRIGQPGAAAPPDFLQVPYD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAVAVLRNDSLQAFLQDRTPSASPDLGKHSPLALLAATCSRIGQPGAAAPPDFLQVPYD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 PALGSPSRLFHPWTADMPAHSPGALPPPHPSLGLTPQKTHLQPSFGAAHELPLTPPADPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PALGSPSRLFHPWTADMPAHSPGALPPPHPSLGLTPQKTHLQPSFGAAHELPLTPPADPS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 YPYEFSPVKMLPSSMAALPASCAPAYVPYAAQAALPPGYSNLLPPPPPPPPPPTCRQLSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YPYEFSPVKMLPSSMAALPASCAPAYVPYAAQAALPPGYSNLLPPPPPPPPPPTCRQLSP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 NPAPDDLPWWSIPQAGAGPGASGVPGSGLSGACAGAPHAPRFPASAAAAAAAAAALQRGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPAPDDLPWWSIPQAGAGPGASGVPGSGLSGACAGAPHAPRFPASAAAAAAAAAALQRGL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 VLGPSDFAQYQSQIAALLQTKAPLAATARRCRRCRCPNCQAAGGAPEAEPGKKKQHVCHV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLGPSDFAQYQSQIAALLQTKAPLAATARRCRRCRCPNCQAAGGAPEAEPGKKKQHVCHV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 PGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFTRSDELQRHLRTHTGEKRFACPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFTRSDELQRHLRTHTGEKRFACPE
              310       320       330       340       350       360

              370       380       390        
pF1KB8 CGKRFMRSDHLAKHVKTHQNKKLKVAEAGVKREDARDL
       ::::::::::::::::::::::::::::::::::::::
NP_001 CGKRFMRSDHLAKHVKTHQNKKLKVAEAGVKREDARDL
              370       380       390        

>>XP_005246599 (OMIM: 609391) PREDICTED: transcription f  (442 aa)
 initn: 2754 init1: 2754 opt: 2755  Z-score: 978.5  bits: 190.1 E(85289): 9.1e-48
Smith-Waterman score: 2755; 96.5% identity (98.0% similar) in 398 aa overlap (1-398:45-442)

                                             10        20        30
pF1KB8                               MAAVAVLRNDSLQAFLQDRTPSASPDLGKH
                                     ..: . :  ..    .::::::::::::::
XP_005 PTLTDHGAGRGPSDASPSHFAPASSKAGWRLSAPSSLARSARGPHVQDRTPSASPDLGKH
           20        30        40        50        60        70    

               40        50        60        70        80        90
pF1KB8 SPLALLAATCSRIGQPGAAAPPDFLQVPYDPALGSPSRLFHPWTADMPAHSPGALPPPHP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SPLALLAATCSRIGQPGAAAPPDFLQVPYDPALGSPSRLFHPWTADMPAHSPGALPPPHP
           80        90       100       110       120       130    

              100       110       120       130       140       150
pF1KB8 SLGLTPQKTHLQPSFGAAHELPLTPPADPSYPYEFSPVKMLPSSMAALPASCAPAYVPYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SLGLTPQKTHLQPSFGAAHELPLTPPADPSYPYEFSPVKMLPSSMAALPASCAPAYVPYA
          140       150       160       170       180       190    

              160       170       180       190       200       210
pF1KB8 AQAALPPGYSNLLPPPPPPPPPPTCRQLSPNPAPDDLPWWSIPQAGAGPGASGVPGSGLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AQAALPPGYSNLLPPPPPPPPPPTCRQLSPNPAPDDLPWWSIPQAGAGPGASGVPGSGLS
          200       210       220       230       240       250    

              220       230       240       250       260       270
pF1KB8 GACAGAPHAPRFPASAAAAAAAAAALQRGLVLGPSDFAQYQSQIAALLQTKAPLAATARR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GACAGAPHAPRFPASAAAAAAAAAALQRGLVLGPSDFAQYQSQIAALLQTKAPLAATARR
          260       270       280       290       300       310    

              280       290       300       310       320       330
pF1KB8 CRRCRCPNCQAAGGAPEAEPGKKKQHVCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CRRCRCPNCQAAGGAPEAEPGKKKQHVCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNW
          320       330       340       350       360       370    

              340       350       360       370       380       390
pF1KB8 LFCGKSFTRSDELQRHLRTHTGEKRFACPECGKRFMRSDHLAKHVKTHQNKKLKVAEAGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LFCGKSFTRSDELQRHLRTHTGEKRFACPECGKRFMRSDHLAKHVKTHQNKKLKVAEAGV
          380       390       400       410       420       430    

               
pF1KB8 KREDARDL
       ::::::::
XP_005 KREDARDL
          440  

>>XP_011509461 (OMIM: 609391) PREDICTED: transcription f  (454 aa)
 initn: 2746 init1: 2746 opt: 2746  Z-score: 975.3  bits: 189.5 E(85289): 1.4e-47
Smith-Waterman score: 2746; 100.0% identity (100.0% similar) in 381 aa overlap (18-398:74-454)

                            10        20        30        40       
pF1KB8              MAAVAVLRNDSLQAFLQDRTPSASPDLGKHSPLALLAATCSRIGQPG
                                     ::::::::::::::::::::::::::::::
XP_011 RLSAPSSLARSARGPHVQVAQAPKVSLGRWDRTPSASPDLGKHSPLALLAATCSRIGQPG
            50        60        70        80        90       100   

        50        60        70        80        90       100       
pF1KB8 AAAPPDFLQVPYDPALGSPSRLFHPWTADMPAHSPGALPPPHPSLGLTPQKTHLQPSFGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AAAPPDFLQVPYDPALGSPSRLFHPWTADMPAHSPGALPPPHPSLGLTPQKTHLQPSFGA
           110       120       130       140       150       160   

       110       120       130       140       150       160       
pF1KB8 AHELPLTPPADPSYPYEFSPVKMLPSSMAALPASCAPAYVPYAAQAALPPGYSNLLPPPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHELPLTPPADPSYPYEFSPVKMLPSSMAALPASCAPAYVPYAAQAALPPGYSNLLPPPP
           170       180       190       200       210       220   

       170       180       190       200       210       220       
pF1KB8 PPPPPPTCRQLSPNPAPDDLPWWSIPQAGAGPGASGVPGSGLSGACAGAPHAPRFPASAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPPPPPTCRQLSPNPAPDDLPWWSIPQAGAGPGASGVPGSGLSGACAGAPHAPRFPASAA
           230       240       250       260       270       280   

       230       240       250       260       270       280       
pF1KB8 AAAAAAAALQRGLVLGPSDFAQYQSQIAALLQTKAPLAATARRCRRCRCPNCQAAGGAPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AAAAAAAALQRGLVLGPSDFAQYQSQIAALLQTKAPLAATARRCRRCRCPNCQAAGGAPE
           290       300       310       320       330       340   

       290       300       310       320       330       340       
pF1KB8 AEPGKKKQHVCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFTRSDELQRHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AEPGKKKQHVCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFTRSDELQRHL
           350       360       370       380       390       400   

       350       360       370       380       390        
pF1KB8 RTHTGEKRFACPECGKRFMRSDHLAKHVKTHQNKKLKVAEAGVKREDARDL
       :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RTHTGEKRFACPECGKRFMRSDHLAKHVKTHQNKKLKVAEAGVKREDARDL
           410       420       430       440       450    

>>NP_001313472 (OMIM: 600540) transcription factor Sp4 i  (471 aa)
 initn: 705 init1: 705 opt: 746  Z-score: 287.4  bits: 62.3 E(85289): 2.8e-09
Smith-Waterman score: 758; 38.8% identity (59.9% similar) in 374 aa overlap (37-382:53-420)

         10        20        30        40        50        60      
pF1KB8 LRNDSLQAFLQDRTPSASPDLGKHSPLALLAATCSRIGQPGAAAPPDFLQVPYDPA--LG
                                     ::: :. .: ..   :. .:   : .  : 
NP_001 DTLVSSADTGQYASTSASSSERTIEESQTPAATESE-AQSSSQLQPNGMQNAQDQSNSLQ
             30        40        50         60        70        80 

           70        80             90         100              110
pF1KB8 SPSRLFHPWTADMPAHSPG-----ALPPPHPSL--GLTPQKTHLQP-------SFGAAHE
       . . . .:   ..  ..:      :.::   .:  : : :  . ::       . . .. 
NP_001 QVQIVGQPILQQIQIQQPQQQIIQAIPPQSFQLQSGQTIQTIQQQPLQNVQLQAVNPTQV
              90       100       110       120       130       140 

              120       130        140       150       160         
pF1KB8 LPLTPPADPSYPYEFSPVKMLP-SSMAALPASCAPAYVPYAAQAALPPGYSNLLPPPP--
       :  .:   ::    .. :..   .:.. : .. :      .   .   : ..:    :  
NP_001 LIRAPTLTPSGQISWQTVQVQNIQSLSNLQVQNAGLSQQLTITPVSSSGGTTLAQIAPVA
             150       160       170       180       190       200 

         170       180       190        200         210       220  
pF1KB8 --PPPPPPTCRQLSPNPAPDDLPWWSIPQAGA-GPGASGVPGS--GLSGACAGAPHAPRF
           :   .  ::.  :   .:   :. . :: :  ..::: .  ...:   :   .   
NP_001 VAGAPITLNTAQLASVP---NLQTVSVANLGAAGVQVQGVPVTITSVAGQQQGQDGVKVQ
             210          220       230       240       250        

            230       240         250       260       270          
pF1KB8 PASAAAAAAAAAALQRGLV--LGPSDFAQYQSQIAALLQTKAPLAATARRCRR--CRCPN
        :. : ...:....  . .  ..:....: . : .   ::.   .  ..: ::  : :::
NP_001 QATIAPVTVAVGGIANATIGAVSPDQLTQVHLQQGQ--QTSDQEVQPGKRLRRVACSCPN
      260       270       280       290         300       310      

      280       290       300       310       320       330        
pF1KB8 CQAAGGAPEAEPGKKKQHVCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFT
       :. . :    ::::::::.::. ::::::::::::.::::::::::::.:::.:::: ::
NP_001 CREGEGRGSNEPGKKKQHICHIEGCGKVYGKTSHLRAHLRWHTGERPFICNWMFCGKRFT
        320       330       340       350       360       370      

      340       350       360       370       380       390        
pF1KB8 RSDELQRHLRTHTGEKRFACPECGKRFMRSDHLAKHVKTHQNKKLKVAEAGVKREDARDL
       :::::::: ::::::::: ::::.:::::::::.::::::::::                
NP_001 RSDELQRHRRTHTGEKRFECPECSKRFMRSDHLSKHVKTHQNKKGGGTALAIVTSGELDS
        380       390       400       410       420       430      

NP_001 SVTEVLGSPRIVTVAAISQDSNPATPNVSTNMEEF
        440       450       460       470 

>>XP_005249885 (OMIM: 600540) PREDICTED: transcription f  (767 aa)
 initn: 812 init1: 705 opt: 746  Z-score: 285.2  bits: 62.6 E(85289): 3.8e-09
Smith-Waterman score: 758; 38.8% identity (59.9% similar) in 374 aa overlap (37-382:349-716)

         10        20        30        40        50        60      
pF1KB8 LRNDSLQAFLQDRTPSASPDLGKHSPLALLAATCSRIGQPGAAAPPDFLQVPYDPA--LG
                                     ::: :. .: ..   :. .:   : .  : 
XP_005 DTLVSSADTGQYASTSASSSERTIEESQTPAATESE-AQSSSQLQPNGMQNAQDQSNSLQ
      320       330       340       350        360       370       

           70        80             90         100              110
pF1KB8 SPSRLFHPWTADMPAHSPG-----ALPPPHPSL--GLTPQKTHLQP-------SFGAAHE
       . . . .:   ..  ..:      :.::   .:  : : :  . ::       . . .. 
XP_005 QVQIVGQPILQQIQIQQPQQQIIQAIPPQSFQLQSGQTIQTIQQQPLQNVQLQAVNPTQV
       380       390       400       410       420       430       

              120       130        140       150       160         
pF1KB8 LPLTPPADPSYPYEFSPVKMLP-SSMAALPASCAPAYVPYAAQAALPPGYSNLLPPPP--
       :  .:   ::    .. :..   .:.. : .. :      .   .   : ..:    :  
XP_005 LIRAPTLTPSGQISWQTVQVQNIQSLSNLQVQNAGLSQQLTITPVSSSGGTTLAQIAPVA
       440       450       460       470       480       490       

         170       180       190        200         210       220  
pF1KB8 --PPPPPPTCRQLSPNPAPDDLPWWSIPQAGA-GPGASGVPGS--GLSGACAGAPHAPRF
           :   .  ::.  :   .:   :. . :: :  ..::: .  ...:   :   .   
XP_005 VAGAPITLNTAQLASVP---NLQTVSVANLGAAGVQVQGVPVTITSVAGQQQGQDGVKVQ
       500       510          520       530       540       550    

            230       240         250       260       270          
pF1KB8 PASAAAAAAAAAALQRGLV--LGPSDFAQYQSQIAALLQTKAPLAATARRCRR--CRCPN
        :. : ...:....  . .  ..:....: . : .   ::.   .  ..: ::  : :::
XP_005 QATIAPVTVAVGGIANATIGAVSPDQLTQVHLQQGQ--QTSDQEVQPGKRLRRVACSCPN
          560       570       580       590         600       610  

      280       290       300       310       320       330        
pF1KB8 CQAAGGAPEAEPGKKKQHVCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFT
       :. . :    ::::::::.::. ::::::::::::.::::::::::::.:::.:::: ::
XP_005 CREGEGRGSNEPGKKKQHICHIEGCGKVYGKTSHLRAHLRWHTGERPFICNWMFCGKRFT
            620       630       640       650       660       670  

      340       350       360       370       380       390        
pF1KB8 RSDELQRHLRTHTGEKRFACPECGKRFMRSDHLAKHVKTHQNKKLKVAEAGVKREDARDL
       :::::::: ::::::::: ::::.:::::::::.::::::::::                
XP_005 RSDELQRHRRTHTGEKRFECPECSKRFMRSDHLSKHVKTHQNKKGGGTALAIVTSGELDS
            680       690       700       710       720       730  

XP_005 SVTEVLGSPRIVTVAAISQDSNPATPNVSTNMEEF
            740       750       760       

>>NP_001313471 (OMIM: 600540) transcription factor Sp4 i  (767 aa)
 initn: 812 init1: 705 opt: 746  Z-score: 285.2  bits: 62.6 E(85289): 3.8e-09
Smith-Waterman score: 758; 38.8% identity (59.9% similar) in 374 aa overlap (37-382:349-716)

         10        20        30        40        50        60      
pF1KB8 LRNDSLQAFLQDRTPSASPDLGKHSPLALLAATCSRIGQPGAAAPPDFLQVPYDPA--LG
                                     ::: :. .: ..   :. .:   : .  : 
NP_001 DTLVSSADTGQYASTSASSSERTIEESQTPAATESE-AQSSSQLQPNGMQNAQDQSNSLQ
      320       330       340       350        360       370       

           70        80             90         100              110
pF1KB8 SPSRLFHPWTADMPAHSPG-----ALPPPHPSL--GLTPQKTHLQP-------SFGAAHE
       . . . .:   ..  ..:      :.::   .:  : : :  . ::       . . .. 
NP_001 QVQIVGQPILQQIQIQQPQQQIIQAIPPQSFQLQSGQTIQTIQQQPLQNVQLQAVNPTQV
       380       390       400       410       420       430       

              120       130        140       150       160         
pF1KB8 LPLTPPADPSYPYEFSPVKMLP-SSMAALPASCAPAYVPYAAQAALPPGYSNLLPPPP--
       :  .:   ::    .. :..   .:.. : .. :      .   .   : ..:    :  
NP_001 LIRAPTLTPSGQISWQTVQVQNIQSLSNLQVQNAGLSQQLTITPVSSSGGTTLAQIAPVA
       440       450       460       470       480       490       

         170       180       190        200         210       220  
pF1KB8 --PPPPPPTCRQLSPNPAPDDLPWWSIPQAGA-GPGASGVPGS--GLSGACAGAPHAPRF
           :   .  ::.  :   .:   :. . :: :  ..::: .  ...:   :   .   
NP_001 VAGAPITLNTAQLASVP---NLQTVSVANLGAAGVQVQGVPVTITSVAGQQQGQDGVKVQ
       500       510          520       530       540       550    

            230       240         250       260       270          
pF1KB8 PASAAAAAAAAAALQRGLV--LGPSDFAQYQSQIAALLQTKAPLAATARRCRR--CRCPN
        :. : ...:....  . .  ..:....: . : .   ::.   .  ..: ::  : :::
NP_001 QATIAPVTVAVGGIANATIGAVSPDQLTQVHLQQGQ--QTSDQEVQPGKRLRRVACSCPN
          560       570       580       590         600       610  

      280       290       300       310       320       330        
pF1KB8 CQAAGGAPEAEPGKKKQHVCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFT
       :. . :    ::::::::.::. ::::::::::::.::::::::::::.:::.:::: ::
NP_001 CREGEGRGSNEPGKKKQHICHIEGCGKVYGKTSHLRAHLRWHTGERPFICNWMFCGKRFT
            620       630       640       650       660       670  

      340       350       360       370       380       390        
pF1KB8 RSDELQRHLRTHTGEKRFACPECGKRFMRSDHLAKHVKTHQNKKLKVAEAGVKREDARDL
       :::::::: ::::::::: ::::.:::::::::.::::::::::                
NP_001 RSDELQRHRRTHTGEKRFECPECSKRFMRSDHLSKHVKTHQNKKGGGTALAIVTSGELDS
            680       690       700       710       720       730  

NP_001 SVTEVLGSPRIVTVAAISQDSNPATPNVSTNMEEF
            740       750       760       

>>NP_003103 (OMIM: 600540) transcription factor Sp4 isof  (784 aa)
 initn: 812 init1: 705 opt: 746  Z-score: 285.1  bits: 62.6 E(85289): 3.9e-09
Smith-Waterman score: 758; 38.8% identity (59.9% similar) in 374 aa overlap (37-382:366-733)

         10        20        30        40        50        60      
pF1KB8 LRNDSLQAFLQDRTPSASPDLGKHSPLALLAATCSRIGQPGAAAPPDFLQVPYDPA--LG
                                     ::: :. .: ..   :. .:   : .  : 
NP_003 DTLVSSADTGQYASTSASSSERTIEESQTPAATESE-AQSSSQLQPNGMQNAQDQSNSLQ
         340       350       360       370        380       390    

           70        80             90         100              110
pF1KB8 SPSRLFHPWTADMPAHSPG-----ALPPPHPSL--GLTPQKTHLQP-------SFGAAHE
       . . . .:   ..  ..:      :.::   .:  : : :  . ::       . . .. 
NP_003 QVQIVGQPILQQIQIQQPQQQIIQAIPPQSFQLQSGQTIQTIQQQPLQNVQLQAVNPTQV
          400       410       420       430       440       450    

              120       130        140       150       160         
pF1KB8 LPLTPPADPSYPYEFSPVKMLP-SSMAALPASCAPAYVPYAAQAALPPGYSNLLPPPP--
       :  .:   ::    .. :..   .:.. : .. :      .   .   : ..:    :  
NP_003 LIRAPTLTPSGQISWQTVQVQNIQSLSNLQVQNAGLSQQLTITPVSSSGGTTLAQIAPVA
          460       470       480       490       500       510    

         170       180       190        200         210       220  
pF1KB8 --PPPPPPTCRQLSPNPAPDDLPWWSIPQAGA-GPGASGVPGS--GLSGACAGAPHAPRF
           :   .  ::.  :   .:   :. . :: :  ..::: .  ...:   :   .   
NP_003 VAGAPITLNTAQLASVP---NLQTVSVANLGAAGVQVQGVPVTITSVAGQQQGQDGVKVQ
          520       530          540       550       560       570 

            230       240         250       260       270          
pF1KB8 PASAAAAAAAAAALQRGLV--LGPSDFAQYQSQIAALLQTKAPLAATARRCRR--CRCPN
        :. : ...:....  . .  ..:....: . : .   ::.   .  ..: ::  : :::
NP_003 QATIAPVTVAVGGIANATIGAVSPDQLTQVHLQQGQ--QTSDQEVQPGKRLRRVACSCPN
             580       590       600         610       620         

      280       290       300       310       320       330        
pF1KB8 CQAAGGAPEAEPGKKKQHVCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFT
       :. . :    ::::::::.::. ::::::::::::.::::::::::::.:::.:::: ::
NP_003 CREGEGRGSNEPGKKKQHICHIEGCGKVYGKTSHLRAHLRWHTGERPFICNWMFCGKRFT
     630       640       650       660       670       680         

      340       350       360       370       380       390        
pF1KB8 RSDELQRHLRTHTGEKRFACPECGKRFMRSDHLAKHVKTHQNKKLKVAEAGVKREDARDL
       :::::::: ::::::::: ::::.:::::::::.::::::::::                
NP_003 RSDELQRHRRTHTGEKRFECPECSKRFMRSDHLSKHVKTHQNKKGGGTALAIVTSGELDS
     690       700       710       720       730       740         

NP_003 SVTEVLGSPRIVTVAAISQDSNPATPNVSTNMEEF
     750       760       770       780    

>>NP_001017371 (OMIM: 601804) transcription factor Sp3 i  (713 aa)
 initn: 670 init1: 646 opt: 700  Z-score: 269.7  bits: 59.6 E(85289): 2.8e-08
Smith-Waterman score: 700; 77.6% identity (90.5% similar) in 116 aa overlap (269-382:525-639)

      240       250       260       270         280       290      
pF1KB8 GLVLGPSDFAQYQSQIAALLQTKAPLAATARRCRR--CRCPNCQAAGGAPEAEPGKKKQH
                                     .: ::  : ::::. .::   .. ::::::
NP_001 SGDSTLNTNDLTHLRVQVVDEEGDQQHQEGKRLRRVACTCPNCKEGGGRG-TNLGKKKQH
          500       510       520       530       540        550   

        300       310       320       330       340       350      
pF1KB8 VCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFTRSDELQRHLRTHTGEKRF
       .::.:::::::::::::.::::::.:::::::::..::: :::::::::: :::::::.:
NP_001 ICHIPGCGKVYGKTSHLRAHLRWHSGERPFVCNWMYCGKRFTRSDELQRHRRTHTGEKKF
           560       570       580       590       600       610   

        360       370       380       390                          
pF1KB8 ACPECGKRFMRSDHLAKHVKTHQNKKLKVAEAGVKREDARDL                  
       .::::.::::::::::::.:::::::                                  
NP_001 VCPECSKRFMRSDHLAKHIKTHQNKKGIHSSSTVLASVEAARDDTLITAGGTTLILANIQ
           620       630       640       650       660       670   

>>NP_001166183 (OMIM: 601804) transcription factor Sp3 i  (778 aa)
 initn: 725 init1: 646 opt: 700  Z-score: 269.3  bits: 59.6 E(85289): 2.9e-08
Smith-Waterman score: 700; 77.6% identity (90.5% similar) in 116 aa overlap (269-382:590-704)

      240       250       260       270         280       290      
pF1KB8 GLVLGPSDFAQYQSQIAALLQTKAPLAATARRCRR--CRCPNCQAAGGAPEAEPGKKKQH
                                     .: ::  : ::::. .::   .. ::::::
NP_001 SGDSTLNTNDLTHLRVQVVDEEGDQQHQEGKRLRRVACTCPNCKEGGGRG-TNLGKKKQH
     560       570       580       590       600        610        

        300       310       320       330       340       350      
pF1KB8 VCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFTRSDELQRHLRTHTGEKRF
       .::.:::::::::::::.::::::.:::::::::..::: :::::::::: :::::::.:
NP_001 ICHIPGCGKVYGKTSHLRAHLRWHSGERPFVCNWMYCGKRFTRSDELQRHRRTHTGEKKF
      620       630       640       650       660       670        

        360       370       380       390                          
pF1KB8 ACPECGKRFMRSDHLAKHVKTHQNKKLKVAEAGVKREDARDL                  
       .::::.::::::::::::.:::::::                                  
NP_001 VCPECSKRFMRSDHLAKHIKTHQNKKGIHSSSTVLASVEAARDDTLITAGGTTLILANIQ
      680       690       700       710       720       730        

>>NP_003102 (OMIM: 601804) transcription factor Sp3 isof  (781 aa)
 initn: 749 init1: 646 opt: 700  Z-score: 269.3  bits: 59.6 E(85289): 2.9e-08
Smith-Waterman score: 700; 77.6% identity (90.5% similar) in 116 aa overlap (269-382:593-707)

      240       250       260       270         280       290      
pF1KB8 GLVLGPSDFAQYQSQIAALLQTKAPLAATARRCRR--CRCPNCQAAGGAPEAEPGKKKQH
                                     .: ::  : ::::. .::   .. ::::::
NP_003 SGDSTLNTNDLTHLRVQVVDEEGDQQHQEGKRLRRVACTCPNCKEGGGRG-TNLGKKKQH
            570       580       590       600       610        620 

        300       310       320       330       340       350      
pF1KB8 VCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFTRSDELQRHLRTHTGEKRF
       .::.:::::::::::::.::::::.:::::::::..::: :::::::::: :::::::.:
NP_003 ICHIPGCGKVYGKTSHLRAHLRWHSGERPFVCNWMYCGKRFTRSDELQRHRRTHTGEKKF
             630       640       650       660       670       680 

        360       370       380       390                          
pF1KB8 ACPECGKRFMRSDHLAKHVKTHQNKKLKVAEAGVKREDARDL                  
       .::::.::::::::::::.:::::::                                  
NP_003 VCPECSKRFMRSDHLAKHIKTHQNKKGIHSSSTVLASVEAARDDTLITAGGTTLILANIQ
             690       700       710       720       730       740 




398 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 12:29:54 2016 done: Fri Nov  4 12:29:56 2016
 Total Scan time:  8.730 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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