GENSCAN 1.0	Date run:  4-Nov-116	Time: 12:20:38

Sequence gi568815597f:67585495_67787771 : 202277 bp : 41.85% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5382   5520  139  2  1   72   89    68 0.021   4.42
 1.02 Intr +  13793  13900  108  0  0   53   88    51 0.003   0.94
 1.03 Intr +  23169  23294  126  1  0   57   64   136 0.686   7.83
 1.04 Term +  27527  27672  146  0  2   59   54   135 0.727   4.29
 1.05 PlyA +  28729  28734    6                               1.05

 2.10 PlyA -  29012  29007    6                               1.05
 2.09 Term -  29530  29317  214  0  1   46   45   141 0.037   1.32
 2.08 Intr -  32111  31984  128  2  2   69   59    74 0.050   1.16
 2.07 Intr -  34374  34261  114  0  0   81   63    60 0.017   2.52
 2.06 Intr -  41164  41098   67  0  1   67   97    12 0.001  -2.01
 2.05 Intr -  47710  47491  220  2  1   99   63   123 0.264   7.34
 2.04 Intr -  49000  48845  156  2  0   76   27    97 0.387   1.46
 2.03 Intr -  52924  52899   26  0  2  109   53    30 0.024  -1.65
 2.02 Intr -  54093  54021   73  1  1  108   79    79 0.028   6.55
 2.01 Init -  72589  72448  142  1  1   65   69    92 0.062   5.34
 2.00 Prom -  73101  73062   40                             -10.05

 3.02 PlyA -  73677  73672    6                               1.05
 3.01 Sngl -  75521  75246  276  2  0   68   55   198 0.645   9.63
 3.00 Prom -  80165  80126   40                              -3.95

 4.00 Prom +  80460  80499   40                              -7.65
 4.01 Init +  82947  82988   42  2  0   95   69    65 0.174   5.77
 4.02 Intr +  99432  99714  283  2  1   -2   70   191 0.130   4.37
 4.03 Intr +  99993 100044   52  1  1   18  113    45 0.309  -2.95
 4.04 Intr + 100110 100526  417  0  0   64   -1   266 0.772   7.51
 4.05 Intr + 100531 100632  102  1  0   86   86   181 0.998  16.07
 4.06 Intr + 100856 101093  238  2  1   76  103   363 0.969  33.29
 4.07 Term + 102167 102280  114  1  0   78   45    92 0.915   1.49
 4.08 PlyA + 102584 102589    6                               1.05

 5.05 PlyA - 102703 102698    6                               1.05
 5.04 Term - 113290 113126  165  1  0   50   43   107 0.669  -0.67
 5.03 Intr - 115355 115211  145  1  1  118   97    44 0.254   7.66
 5.02 Intr - 131176 131131   46  2  1   99  103    -4 0.039  -1.25
 5.01 Init - 134796 134532  265  0  1   68   40   231 0.085  13.52
 5.00 Prom - 140714 140675   40                              -6.55

 6.04 PlyA - 141683 141678    6                               1.05
 6.03 Term - 150661 150569   93  1  0   86   45   107 0.648   3.05
 6.02 Intr - 155382 155282  101  1  2   61   81    96 0.230   5.11
 6.01 Init - 157825 157801   25  1  1   63   79    19 0.205  -1.66
 6.00 Prom - 158181 158142   40                              -5.25

 7.04 PlyA - 158425 158420    6                               1.05
 7.03 Term - 159040 158838  203  2  2   61   40   196 0.742   8.67
 7.02 Intr - 166089 165954  136  0  1   39   57    88 0.212   0.02
 7.01 Init - 167128 167048   81  1  0   18   84    89 0.232   2.52
 7.00 Prom - 169779 169740   40                              -3.45

 8.05 PlyA - 170102 170097    6                               1.05
 8.04 Term - 171106 171005  102  1  0   52   53   122 0.597   2.40
 8.03 Intr - 176353 176257   97  0  1  123   86    31 0.249   5.49
 8.02 Intr - 181434 181295  140  0  2   54   37   116 0.054   1.44
 8.01 Intr - 195079 194909  171  1  0   65  106    56 0.047   4.32

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -   6070   5952  119  2  2  110   53    67 0.804   3.12
S.002 Init -  12729  12684   46  0  1   78  116    43 0.907   7.00
S.003 Sngl +  89226  89654  429  2  0   59   39   198 0.871   6.47


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:67585495_67787771|GENSCAN_predicted_peptide_1|172_aa
IKEMKAQEIKELAHTHPRQCRSGGQTQLAFTLMSITANYLTIMPWPTLEDSSSWEQTSTS
VQQRHKLGPHPIGPCSGPALPRAGKFPGNLTISSCELGLASPGVPLVIAEGLAEKGTSEQ
ETERGLQRDQCPESRRVGSQNDSGRLCTVEHWPLTAVGVWRSCWPGALQGLC

>gi568815597f:67585495_67787771|GENSCAN_predicted_CDS_1|519_bp
ataaaggaaatgaaggctcaggagataaaagaacttgcccacactcacccaagacagtgt
aggagtggtggccaaacccagctggctttcacattaatgagcatcacagcaaactacctc
accataatgccatggccaacactggaagattccagcagctgggagcaaactagcaccagt
gtccagcagagacataaattggggccccaccccatcgggccctgttcaggccctgccctt
cctagagctggcaaatttcctggaaatttaaccatcagctcttgtgaactgggactagcc
agccctggcgtaccactggtgattgcggaaggccttgctgagaaagggacatctgaacag
gaaactgaaagaggattgcagcgtgaccagtgccctgagagcagacgagtggggagccag
aatgacagtggccgcctctgcacagtggaacactggcccttgacagctgtaggggtctgg
aggagctgctggcctggcgctttgcagggcttgtgctga

>gi568815597f:67585495_67787771|GENSCAN_predicted_peptide_2|379_aa
MISMMKLVHKNIKATPYVQKVEENIAIMRREFESVKKTQMELLEIIQSFSDFLTWQLASK
RAEMEVASVLKTHQNLKSKAEWFLLSAFMGCLTLMRPHQNLITRVSLKESLLHGTPGTVF
PCPDKETDSERESLVQRTEGTLIFHVASQQALVCPVPIAAEDISFPDICQITFYLVPDIY
SVKMGHSHDPRDQTDPHRQDRLGKAQTNHMASPTTKKLANVRKHMEYLECSAKNETMDTK
TPCSLDCSGVISSKKPFGFSPSNQTGGIIAAQDTHVWGTEEEITSSYERDAQFHLEGEYA
ASSKTQHSSFSESEIQVQVQLSWVIRVQISHKAVIKVSVRLQSPQGSTAGGSVSQLTWVA
VGSPQKIDFPAQSHGAGRR

>gi568815597f:67585495_67787771|GENSCAN_predicted_CDS_2|1140_bp
atgatatcaatgatgaaactagtgcataagaatattaaagccactccatatgttcaaaag
gtagaagaaaatatagccataatgagaagagaatttgaaagtgtgaaaaagacccaaatg
gaacttctagagattatccaaagtttttcagacttcctgacatggcaactggcttcaaag
agagcggaaatggaagttgccagcgttcttaagacgcatcagaacctgaagtccaaggct
gaatggttcctactctcagctttcatgggatgcctaaccctcatgaggcctcatcaaaac
ctcattaccagagtgagcctaaaagagtctctgctccatgggaccccagggacagtgttc
ccatgtccagataaagaaacagattcagagagggaaagtcttgtgcagaggacagagggg
accctcatctttcatgtcgcttcccagcaagcccttgtgtgtcctgtgccaattgcagct
gaagatatttcatttcctgatatttgccaaatcaccttttacctagttcctgatatttat
tctgtcaagatggggcacagccatgacccgagagaccagacagacccacacaggcaagac
cgattaggcaaagcccagactaatcacatggcctcgcctacaacaaaaaaactagcaaat
gtgaggaagcacatggaatatttggagtgctctgccaagaatgagacgatggacacaaaa
accccttgttctctagactgttcaggtgtcatctcctccaagaagccctttggattctct
ccctccaatcagactggggggataatagcagcacaagacactcatgtatgggggacagag
gaagaaataacttcatcatatgagagggatgcccaattccatttggaaggggagtatgca
gcctccagcaaaacccaacacagcagtttctctgagtcagaaattcaggtacaggtgcag
cttagttgggtgattagggtgcagatctctcacaaagctgtaatcaaggtgtctgtcagg
ctacagtcacctcaagggtcaactgcagggggatctgtttcccagctcacttgggtggct
gttggcagtcctcagaaaatcgactttccagctcaatcacatggtgctggcagacgttag

>gi568815597f:67585495_67787771|GENSCAN_predicted_peptide_3|91_aa
MASNVINKSNPHSMNPRVFIGNLNTLVVKKSDVEAIFSKYGKTVGGSVHKGFASVHCVHE
RNIQPTVAGGDGRMIAGQVLDTNLAAELKVN

>gi568815597f:67585495_67787771|GENSCAN_predicted_CDS_3|276_bp
atggctagcaatgttatcaacaagtcaaatcctcactccatgaaccccagagtattcatt
gggaatctcaacactcttgtggtcaagaagtctgatgtggaagcaatcttttcaaagtat
ggcaaaactgtgggtggctctgttcataagggctttgcctctgttcactgtgttcatgag
agaaatatccagcctactgtggcaggaggggatggcagaatgattgccggccaagtttta
gatactaatctggctgcagagctgaaagtgaactga

>gi568815597f:67585495_67787771|GENSCAN_predicted_peptide_4|415_aa
MTFGQQDPVQNEDVPPTPNGPRQPDKSARGTRLPLSAPPPPPPPRLASRVAPPFSAPLNL
TPGAGVKLLEQADLHSPMAKLHANEAEGGWLRVGRITPESGALCPPVAVCNMTLEEFSAG
EQKTESRAVEGLQGRKLKSLHRATPALAPSGLSVELPRTERACPPTRTSPAGAFAKGSSG
RRCPCGSRGWQPVAGALSGLLTGRPVLGRAGVMGGDGAAGAPGFRRAQVRGGACIREGGA
WYRTRGAAMAPRAPGLTGPLALARVMDKVGDALEEVLSKALSQRTITVGVYEAAKLLNVD
PDNVVLCLLAADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRLAELLLLETDAGP
AASEGAEQPPDLHCVLVTNPHSSQWKDPALSQLICFCRESRYMDQWVPVINLPER

>gi568815597f:67585495_67787771|GENSCAN_predicted_CDS_4|1248_bp
atgacgtttggccagcaggacccagtgcaaaatgaagatgtgccccccactcccaatggt
ccccgccaaccggataagagtgcgcgcgggacccgccttcccctctcggcaccgcccccg
cccccgccccctcggctcgcctcccgcgtggctcctcccttttccgctcctctcaacctg
actccaggagctggggtcaaattgctggagcaggctgatttgcatagcccaatggccaag
ctgcatgcaaatgaggcggaaggtggttggctgagggttggcaggataaccccggagagc
ggggccctttgtcctccagtggctgtttgcaatatgactttggaggaattctcggctgga
gagcagaagaccgaaagccgggctgtggaaggcttgcaggggaggaagctaaaaagtttg
cacagggcaactcccgcccttgctccctcgggactctccgtggagctcccacggactgaa
agagcgtgccccccaacccgaacgagccccgccggggcctttgcaaagggcagcagtggc
cgtcgctgcccgtgcggctcccgtggctggcagcctgtggcaggggcactctcgggactt
ctcacgggacgcccggtccttgggcgtgcaggggtcatggggggtgacggggccgcggga
gcgccgggttttcgtagagcccaggtgcgcggtggtgcttgcattcgagagggaggggcg
tggtaccggacgaggggggcggcgatggccccgagggcaccggggctgacgggacccctc
gcccttgcccgcgtgatggataaggtgggggatgccctggaggaagtgctcagcaaagcc
ctgagtcagcgcacgatcactgtcggggtgtacgaagcggccaagctgctcaacgtcgac
cccgataacgtggtgttgtgcctgctggcggcggacgaggacgacgacagagatgtggct
ctgcagatccacttcaccctgatccaggcgttttgctgcgagaacgacatcaacatcctg
cgcgtcagcaacccgggccggctggcggagctcctgctcttggagaccgacgctggcccc
gcggcgagcgagggcgccgagcagcccccggacctgcactgcgtgctggtgacgaatcca
cattcatctcaatggaaggatcctgccttaagtcaacttatttgtttttgccgggaaagt
cgctacatggatcaatgggttccagtgattaatctccctgaacggtga

>gi568815597f:67585495_67787771|GENSCAN_predicted_peptide_5|206_aa
MGPPSPAENLFGAQDECAWSLGILVPHKWPSHAGGESSEHQQLALIKCMETSEAPPRLLR
AVQATKQVSICGLRTVSISRDTCRKEQQAPSLYSCCSEAGNKGWAGIPTEMRGGQNHQRT
RAGGSQQAPGYEPDTLQRWPLLLRASTPHLQKKTFANYVTSQGHYGSINLCTRASLKQSL
PEQMWAVLPPLSQALTDLFINVPDLK

>gi568815597f:67585495_67787771|GENSCAN_predicted_CDS_5|621_bp
atgggcccgccttcaccagctgaaaacttatttggggcacaggatgagtgtgcatggtcc
cttggaatcttggtgccacacaagtggccatctcatgctggaggtgaaagttcagagcac
cagcaactggccctaatcaaatgcatggaaacatcagaagctccacccaggcttctcaga
gctgtgcaggccaccaagcaagtgagcatctgtgggctcagaacagtcagtatttcacgg
gatacttgtaggaaggagcagcaagccccttccttgtattcttgctgttcagaggcaggc
aacaaagggtgggctgggattcccacagagatgaggggagggcaaaatcatcaaagaaca
agggcgggaggcagccaacaagccccaggctatgaaccggacacgctgcagagatggccc
ctgcttctgagagccagcactccacacttacaaaagaagacattcgccaactatgtgaca
tcacaagggcactatggatccataaatttgtgtactagggcaagcctaaagcagtcactc
cctgaacaaatgtgggcagtgctacctcctctaagccaggcactgacggacttgttcatt
aatgtccccgaccttaagtaa

>gi568815597f:67585495_67787771|GENSCAN_predicted_peptide_6|72_aa
MKNLASASVLEQWRSKTKALADSMSGEVLLPHTRCLLAMYHKFLQVKWQMYESLHKMGTG
RHPVDAKPFSVQ

>gi568815597f:67585495_67787771|GENSCAN_predicted_CDS_6|219_bp
atgaagaaccttgcttctgcttcagttttggagcagtggagatccaagaccaaggctcta
gcagattcgatgtctggtgaggtcctgcttcctcatacacggtgccttcttgctatgtac
cacaagttcctgcaagtgaaatggcagatgtatgagtcacttcataagatgggaacagga
agacatcctgttgatgccaagccattttcagttcagtga

>gi568815597f:67585495_67787771|GENSCAN_predicted_peptide_7|139_aa
MSGPNRKEHHDSLVIAAMSADPLGMSTTPNTATLTCLKTPPWTGDSVSPELPLLRLWRRL
GTETLTVGQSTEDYKLVLLLTNVLRISENQLFKEVPEHSVGHSGEETPGVASAFPWTPEN
FISGSGVADSSWQYKNSAV

>gi568815597f:67585495_67787771|GENSCAN_predicted_CDS_7|420_bp
atgtctgggcccaacaggaaagaacaccatgactcattagtgatagctgccatgagtgct
gatccattagggatgtctaccaccccaaacacagcaaccctgacctgtttgaagacccca
ccctggacaggggacagtgtttccccagagctgccactcttgaggctctggaggagactg
ggtacagagaccctaactgtgggacagtcaactgaagactataaactggtgctccttctt
acaaatgttcttcgtatatctgaaaatcagttatttaaagaagtgcccgagcacagtgta
gggcacagtggagaggaaacaccaggggtagcctctgcctttccttggacacctgagaat
ttcatctcaggctctggagttgcggacagcagttggcagtacaaaaactctgctgtttaa

>gi568815597f:67585495_67787771|GENSCAN_predicted_peptide_8|169_aa
CFPVCVFTEYLRYTKYLTRSWRDKNELDTLLTFRDSANLLGEKPINGNLKYRRHQSKALP
VYAPSVARPAFPKRTPNPFREGEARPSEELLSRHLPDHQMPSSGITERVFLIAPASLPAP
SLTRQKADGVHIPSGRVKTITPYLVASKSNPLPILNPEDGKLVSRAIIL

>gi568815597f:67585495_67787771|GENSCAN_predicted_CDS_8|510_bp
tgttttcctgtgtgtgtctttactgagtatctacgatataccaagtaccttactaggtcc
tggagagacaaaaatgagctagacacattattaaccttcagggattctgcaaacctgttg
ggggagaaaccaataaatggaaatctaaaatataggagacaccagagtaaagcattgcct
gtgtatgccccttctgtagctagacctgcattccctaagaggacacctaaccctttccgt
gagggggaagcgaggcccagcgaggaactgctgtccaggcatcttcctgaccaccagatg
ccatcctcagggatcactgagagagttttcctgattgcccctgcctctctccctgcaccc
tccctcacccgacagaaagcggatggtgtgcacataccctcagggagggttaaaaccatc
acaccctatcttgtggcctccaagtcaaacccactccccatcctgaacccagaagatggg
aaactggtgtccagagccatcatcctttga