GENSCAN 1.0	Date run:  4-Nov-116	Time: 12:16:38

Sequence gi568815584r:37491368_37694972 : 203605 bp : 38.52% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   4915   5648  734  2  2   67   48   303 0.779  16.84
 1.02 PlyA +   5692   5697    6                               1.05

 2.00 Prom +   5809   5848   40                              -5.65
 2.01 Init +  11392  11684  293  0  2   47   50   248 0.051  13.57
 2.02 Intr +  13676  13803  128  2  2   24   82    88 0.024   1.20
 2.03 Intr +  47253  47431  179  1  2   22   33   167 0.136   3.32
 2.04 Intr +  49752  49807   56  2  2  118   43    47 0.500   0.06
 2.05 Intr +  49960  50034   75  1  0  127   95   -22 0.293   0.11
 2.06 Intr +  51266  51314   49  2  1   63  100    35 0.564  -0.04
 2.07 Term +  55538  55675  138  1  0   72   41   191 0.990   9.78
 2.08 PlyA +  56261  56266    6                               1.05

 3.17 PlyA -  56473  56468    6                               1.05
 3.16 Term -  82176  82162   15  0  0  126   51    14 0.541  -1.24
 3.15 Intr -  83938  83840   99  1  0   58   60   144 0.192   7.99
 3.14 Intr -  92424  92187  238  2  1   79   28   115 0.080   1.29
 3.13 Intr -  94063  93985   79  2  1   59   49    57 0.093  -3.41
 3.12 Intr -  94217  94137   81  0  0   55   62    77 0.033   0.49
 3.11 Intr - 101344 100033 1312  1  1  110   93  1431 0.097 132.16
 3.10 Intr - 103617 103534   84  0  0   26   78   104 0.001   2.30
 3.09 Intr - 106852 106686  167  2  2   95   39   151 0.005   9.66
 3.08 Intr - 107143 106888  256  1  1   -9   47   174 0.559  -0.31
 3.07 Intr - 108417 108224  194  1  2   -8   88   129 0.508   1.59
 3.06 Intr - 108707 108557  151  2  1   59   62   110 0.501   4.31
 3.05 Intr - 110524 110396  129  1  0   34   49   100 0.538   0.67
 3.04 Intr - 111362 111152  211  1  1   42   80   139 0.957   6.49
 3.03 Intr - 111960 111785  176  0  2   37   62   140 0.764   4.12
 3.02 Intr - 120272 119957  316  1  1  122   89   117 0.191  10.34
 3.01 Init - 121621 121614    8  1  2   62   98     5 0.139  -0.92
 3.00 Prom - 123925 123886   40                              -7.55

 4.00 Prom + 127516 127555   40                              -5.85
 4.01 Init + 130947 131636  690  2  0   58   50   752 0.036  61.50
 4.02 Intr + 132925 133047  123  0  0  -21   75   138 0.022   1.46
 4.03 Intr + 140302 140375   74  0  2   60   86    39 0.129  -1.81
 4.04 Term + 142102 142534  433  1  1   40   48   261 0.330  11.08
 4.05 PlyA + 142971 142976    6                               1.05

 5.00 Prom + 147287 147326   40                              -4.55
 5.01 Init + 156471 156591  121  2  1   14   57   112 0.171   1.10
 5.02 Intr + 158210 158308   99  0  0   79   23   110 0.060   2.76
 5.03 Intr + 187035 187216  182  1  2  106   46    27 0.005  -1.03
 5.04 Intr + 188784 188894  111  2  0   86   58    38 0.006   0.26
 5.05 Intr + 191391 191597  207  2  0   49  107   185 0.149  14.85
 5.06 Term + 196681 196749   69  0  0   52   49    85 0.264  -2.04
 5.07 PlyA + 197506 197511    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  11392  11688  297  0  0   47   54   248 0.934  12.79
S.002 Term - 101344  99998 1347  1  0  110   36  1427 0.900 130.18
S.003 Term - 106473 106217  257  1  2   27   48   278 0.952  12.46
S.004 Intr - 106852 106682  171  2  0   95   39   154 0.981  10.19
S.005 Init - 115469 115302  168  2  0   74  -33   164 0.827   2.48
S.006 Sngl + 130947 131660  714  2  0   58   38   789 0.892  64.87
S.007 Term - 181905 181803  103  2  1  111   41   111 0.882   5.47
S.008 Init + 191418 191597  180  2  0   69  107   161 0.817  15.33


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:37491368_37694972|GENSCAN_predicted_peptide_1|244_aa
XLEVLARAIRQKKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSG
YKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLN
EIKEDTNKWKNIPCSWVGIINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFVWN
QKRVCIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPH
RSDL

>gi568815584r:37491368_37694972|GENSCAN_predicted_CDS_1|735_bp
ntgttggaagttctggccagggcaattaggcagaagaaggaaataaagggtattcaatta
ggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtatatctagaaaac
cccattgtctcagcccaaaacctccttaagctgataagcaacttcagcaaagtctcagga
tacaaaatcaatgtacaaaaatcacaagcattcttatacaccaataacagacaaacagag
agccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctagga
atccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaat
gaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaataatc
aatatcgtgaaaatggccatactgcccaaggtaatttacagattcaatgccatccccatc
aagctaccaatgactttcttcacagaattggaaaaaactactttaaagttcgtatggaac
caaaaaagagtctgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatc
acactacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactgg
taccaaaacagagatatagatcaatggaacagaacagagccctcagaaataacaccgcat
agatctgatctttga

>gi568815584r:37491368_37694972|GENSCAN_predicted_peptide_2|305_aa
MQNDFDELAEVGFRRSVITKFSELKEHVQTHYKEAKNLEKRLHEWLTRINSVEKTLNDLM
EMKTMAGELHDACTSFNRRCNQVQERISVIEDQINEIKLTQEEVDPLNRPITGSEIEAII
NSLPPKKVQNQTDSQLNSTKAARAPPFESGLAAIHFNQQKKARDVVQLLNKVSGGLTDSG
IALLLTCADHVNKSGPAYLRLLTLDLLVTQNFSTSEILSLESGFNHFLPKTVSLCPRLFH
PTALHHQEAFTDLSSPSIPKVGKAGGCTEEEGWNRDHEDSDLIEKKRQSGEAITSGDQAA
SFNTV

>gi568815584r:37491368_37694972|GENSCAN_predicted_CDS_2|918_bp
atgcagaatgactttgatgagttggcagaagtaggcttcagaaggtcggtaataacaaaa
ttctctgagctaaaggagcatgttcaaacccattacaaggaagctaaaaaccttgaaaaa
aggttacatgaatggctaactagaataaacagtgtagagaagaccttaaatgacctgatg
gagatgaaaaccatggcaggagaacttcatgatgcatgcacaagcttcaataggcgatgc
aatcaagtgcaagaaaggatatcagtgattgaagatcaaattaatgaaataaaactaacc
caggaggaagttgatcctctaaatagaccaataacaggctctgaaattgaggcaataatt
aatagcctaccaccaaaaaaagtccagaaccagacagattcacagctgaattctaccaaa
gctgctcgtgctccaccctttgaatctgggctggctgcgattcactttaaccaacaaaag
aaagcaagggatgttgtacaacttctgaacaaggtctcaggaggcctcactgattctggc
attgccctcttgctgacttgtgctgaccacgtgaataaatccgggccagcttacttgaga
ctactcactctggatcttcttgtcactcagaacttttctacatctgaaatcctaagtctg
gagtctgggtttaatcactttctccctaagacagtttccttatgtcctcgtctttttcac
cctactgccctgcatcatcaggaagcctttacagacctttcctctccttccatacccaag
gttggaaaggctggtggatgtactgaggaagaaggttggaaccgggaccatgaggacagt
gatctgattgaaaaaaaacgacagtctggggaagcgatcacatctggtgaccaggctgct
tcattcaacactgtgtaa

>gi568815584r:37491368_37694972|GENSCAN_predicted_peptide_3|1171_aa
MASPVGRRAPTSPFHQVLNPSSSSSTRAHSPTKGSPNSSPSAPAPFSTLISAGVNLPQRI
SEAEQRGQPLRPNNAPLLRKAPTRSHRAPGRVLLSPGIEGASAPIQVATLFLQLTIARIR
ASGPGSSLGKRGNGGTEGLAGFPSILEVGSTAVSVRTMLPHPNPNARGKVQFGEEDLKAG
RLGCRSSAASEPRLNRGFSGFIHPVGQWGWEEHRGHQMRRRIAQPCAFSSDSSPEEESIS
AIERCGCCLSTARKSEMFDFGSHVDHPIWAKRAADSAHVQAPSPRGFKVERESPRILSAA
QSRDRAPQEGDRLDEEGPAGAEHVLQQALTGGTSSFQRCRLPSRGNRPSQSFSFEYMKMR
VDFGKAMLSRGQRDGFVARGRGRVGSSSGSDIRLRVLRDCAGSRPHGCSKGSFREGRSRF
LRWRLPGVPAHPTVLTAADPPLEEPALPATWTAPSCRRPVLNTGKFNPGHRRSRHVPALA
AEDRPGFLQRAAQSLQSTVSNGVGAYLGKEVGKEQAAAAGPGYRLASNSQTAALLYGGSR
MLGTVKMEGHETSDWNSYYADTQEAYSSVPVSNMNSGLGSMNSMNTYMTMNTMTTSGNMT
PASFNMSYANPGLGAGLSPGAVAGMPGGSAGAMNSMTAAGVTAMGTALSPSGMGAMGAQQ
AASMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGGGGDAKTFKRSYPHAKPPYSYISLIT
MAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGK
GSYWTLHPDSGNMFENGCYLRRQKRFKCEKQPGAGGGGGSGSGGSGAKGGPESRKDPSGA
SNPSADSPLHRGVHGKTGQLEGAPAPGPAASPQTLDHSGATATGGASELKTPASSTAPPI
SSGPGALASVPASHPAHGLAPHESQLHLKGDPHYSFNHPFSINNLMSSSEQQHKLDFKAY
EQALQYSPYGSTLPASLPLGSASVTTRSPIEPSALEPAYYQGPIMHQGGSRRPPSPVLLE
SGISLHDSVQLYTRNPTAAQPWAPTTAASSAAFRSWEAIPGARGALGRRAALRPWLSTQG
SQHPGRAAQPRRGAGCTRNLARKNWAPSRFHASHCGKAPQEPGRGPRDTRSRPRALQKSA
IEKKTLSGPCSINLSHKYPVEAHEKVLDLGP

>gi568815584r:37491368_37694972|GENSCAN_predicted_CDS_3|3516_bp
atggcaagccccgtggggcgtcgtgcacctacctctcccttccaccaggttctcaatcct
tccagctcctcttcaacccgtgctcattctcccacgaaaggcagcccaaactccagcccc
agtgccccagcccctttttctaccctgatttctgccggggtgaacctgccacagcggatt
agcgaggcggaacagaggggacaaccgctccgcccaaacaacgcacctctccttcgcaaa
gcgcccacacgaagtcaccgcgccccaggccgcgttctcctctcacccggcatcgagggc
gcctccgctccaattcaggtggcgactttgttcctacaactgacgattgccagaatccgg
gcatcaggtccaggctcctcacttgggaaaagaggaaacggaggcacagagggcctggct
gggttccctagcatattagaggtcggcagcactgcggtcagcgtcagaaccatgctgccc
caccccaatcctaacgccaggggtaaggtgcagtttggagaagaggacctgaaagcagga
aggttggggtgcagatcctccgccgcatcggagccacggctgaaccgtgggttcagtggg
ttcatccacccggtgggacagtgggggtgggaggaacatcgaggacaccagatgcggcgg
aggatcgcacagccttgtgccttctcgagtgatagcagcccagaagaggagtcaatatct
gctattgaaaggtgtggatgctgcctttctacagcgaggaaaagtgaaatgtttgatttt
gggtcacacgttgaccaccctatatgggcaaagcgagctgctgattctgcccacgtccag
gcccctagccctaggggttttaaagtagagcgggaaagcccgaggatcctttcagcagca
cagagcagagaccgcgctccccaggagggggatcggctggatgaggagggaccggctggg
gctgagcacgtcctccaacaggcgctgaccgggggcacttcttccttccaacgctgtcga
ctgcccagcaggggaaatcgcccttctcagtctttctcatttgaatacatgaaaatgcga
gttgattttggcaaggcgatgctctcccgtggccagagggacggttttgtcgcccgcggg
cgaggccgggtggggagcagctccggctccgacatccggctgcgggtactgcgggactgc
gccgggagcaggccccacgggtgtagcaagggcagcttccgggaagggcggagccgcttc
ctccgctggcggctacccggagtacccgcgcaccctacagtcctcactgccgcggatccc
ccacttgaggagcccgccctccccgcgacctggaccgccccaagctgtcgcagacccgtc
ttaaacacaggcaagtttaacccgggacaccgcaggagccgccacgtgcctgccctcgcg
gctgaagacaggcctggtttcctccaacgagcagcacaatccttgcaaagcacagtttcc
aatggtgtaggtgcctatttgggaaaagaggttggaaaagagcaggctgcagccgctgga
cctggctaccgactggccagcaactcccagacagcagcattactttatggtggctccagg
atgttaggaactgtgaagatggaagggcatgaaaccagcgactggaacagctactacgca
gacacgcaggaggcctactcctccgtcccggtcagcaacatgaactcaggcctgggctcc
atgaactccatgaacacctacatgaccatgaacaccatgactacgagcggcaacatgacc
ccggcgtccttcaacatgtcctatgccaacccgggcctaggggccggcctgagtcccggc
gcagtagccggcatgccggggggctcggcgggcgccatgaacagcatgactgcggccggc
gtgacggccatgggtacggcgctgagcccgagcggcatgggcgccatgggtgcgcagcag
gcggcctccatgaatggcctgggcccctacgcggccgccatgaacccgtgcatgagcccc
atggcgtacgcgccgtccaacctgggccgcagccgcgcgggcggcggcggcgacgccaag
acgttcaagcgcagctacccgcacgccaagccgccctactcgtacatctcgctcatcacc
atggccatccagcaggcgcccagcaagatgctcacgctgagcgagatctaccagtggatc
atggacctcttcccctattaccggcagaaccagcagcgctggcagaactccatccgccac
tcgctgtccttcaatgactgcttcgtcaaggtggcacgctccccggacaagccgggcaag
ggctcctactggacgctgcacccggactccggcaacatgttcgagaacggctgctacttg
cgccgccagaagcgcttcaagtgcgagaagcagccgggggccggcggcgggggcgggagc
ggaagcgggggcagcggcgccaagggcggccctgagagccgcaaggacccctctggcgcc
tctaaccccagcgccgactcgcccctccatcggggtgtgcacgggaagaccggccagcta
gagggcgcgccggcccccgggcccgccgccagcccccagactctggaccacagtggggcg
acggcgacagggggcgcctcggagttgaagactccagcctcctcaactgcgccccccata
agctccgggcccggggcgctggcctctgtgcccgcctctcacccggcacacggcttggca
ccccacgagtcccagctgcacctgaaaggggacccccactactccttcaaccacccgttc
tccatcaacaacctcatgtcctcctcggagcagcagcataagctggacttcaaggcatac
gaacaggcactgcaatactcgccttacggctctacgttgcccgccagcctgcctctaggc
agcgcctcggtgaccaccaggagccccatcgagccctcagccctggagccggcgtactac
caagggcccattatgcaccagggaggaagtaggcgccctcctagtcccgtgctcctggaa
agcggaatttctttgcatgattcagtccagctatacacccgtaacccaacagcggctcaa
ccctgggcgccaactaccgctgcgtcctccgccgcttttcgcagctgggaagccatccct
ggtgcccggggcgcgctgggcagaagggccgccctgcgcccctggctgagcacgcagggc
tctcagcatcccggccgcgccgcccaaccccggcgcggagctggctgtacccgcaacctg
gcaaggaaaaactgggccccctctcgcttccacgccagccattgcggaaaagcgccccag
gaacctgggcggggaccgcgggacaccaggtcccgcccccgggccctgcagaaatctgcc
atcgaaaagaagactctctcaggtccctgctctatcaatctttctcataagtacccggtg
gaggcccatgaaaaagtgttggatcttggtccctga

>gi568815584r:37491368_37694972|GENSCAN_predicted_peptide_4|439_aa
MSAAALLQEVLGGAPRPSGLGEAAAPGKTRSFRPRDFYLRSSAFLRHQALKKPPVIASGF
GTARPVVLLPPPEPPVKRRARGVLESSRHAAPRRVFHLGREREQSQEVAPLAGPCMAKER
KASSVSAEDGYMEASSGRRKVRIRSNFVSESGAREAREAAGLGAQGEQESWPPSDAREAA
WQALLPSRVIPTSIEEIIASLQSEAQLASDQTIKELIRSVLGQNYDITMEIFYESNKKTN
QGCPMKSLSKEKKGLGAPTSDIGSMLYDIVKVGEFLLDNIVKSVFQLGSILSVTFSPIVM
SCVPQLEMQKSPAYCIDLAGSCRPELFLFSHLASRYFFIATQEQPNTISSINGLLQVPPT
PSQWDGDSGVSKLSTSSRSKEATRSLFPLVSMEAMWRTVMRHSYSFQLGWDQQRPSGEPK
LLVPPCSNKEAPIPGASKG

>gi568815584r:37491368_37694972|GENSCAN_predicted_CDS_4|1320_bp
atgtccgcggccgccctcctgcaggaggtgctcggaggcgcgccgcgtccctcgggcctg
ggtgaggcggcggctccaggcaagacccggtcgtttcgcccccgggacttttacttgcgg
agctccgcgttcctacggcaccaggccctgaaaaagcccccagtcatcgcctcggggttc
ggcacggccagacccgtggtcctgctgcctccgcccgagccacccgtgaagcgcagagcg
cgcggggtcttggagagctcgcggcacgcggctcccaggcgggtcttccacttgggaagg
gagcgcgaacagagccaggaggtagctcctctcgcagggccctgcatggccaaagagagg
aaggccagctccgtctccgcagaggacggctacatggaggccagcagcgggcggaggaaa
gtgaggatccgcagcaacttcgtgagcgagagcggggcccgcgaggcgcgggaagcggcg
gggttaggagcccagggagaacaggagagctggccgcccagcgacgcgcgggaggccgcc
tggcaggcgctgctgccctcccgcgtgatccccacgtccatcgaagagatcatcgcctct
ctgcagtccgaggcccagctggcctccgaccagaccatcaaagagctcatacggagcgtc
cttggccagaactacgacattacaatggaaattttctatgaatctaataagaaaacaaat
cagggatgcccaatgaagagccttagcaaagagaagaaaggcctcggtgcccctacttct
gacataggctccatgctctacgacatagttaaggttggggaatttctcctggataatatc
gtgaagagtgttttccaacttggttccattctctccgtcactttcagtcccattgtgatg
agctgtgtacctcagttggaaatgcagaaatcacctgcctactgcattgatctcgctggg
agctgcagaccggagctgttcctattcagccatcttgccagcaggtatttctttatagca
acacaagaacagcctaatacaatttccagtatcaacgggctgttacaagttccccctacc
ccttcccagtgggatggagacagtggagtgtctaaactttcaacatcgtccagaagtaaa
gaggccactcgctccctcttccctctggtgtcaatggaggccatgtggagaacagtaatg
agacactcctattctttccaactaggatgggatcagcagaggcctagtggggagccaaaa
ctcctagtcccaccatgcagtaacaaggaggcccccatccctggtgccagtaaaggctga

>gi568815584r:37491368_37694972|GENSCAN_predicted_peptide_5|262_aa
MKEAEGSLVEEKNQENVFGGNQVKKHFKKDAITVSNTVKSRFLKPESRKEALVCNFMLCG
SAFYLRPWALSGLWFLCLASWVSPLHGQTFSQSLKDPMPISGALSLCSALISTLFLTNSS
PFVLLSSDFCLFNLDISLMGKMYLKTSPMQAETPEIQAEYKFQMGAEESQMSVHKELSET
MSSILQIEQEDIEWGPSEAESIVFKPQEISQVQPAEELSKPLEDGQPTSDSKEAKWVSLT
VRGKPTPLKDESQDKQHLPQAD

>gi568815584r:37491368_37694972|GENSCAN_predicted_CDS_5|789_bp
atgaaagaagctgaggggagcctggtagaagagaaaaaccaggagaatgtgtttggtgga
aaccaagtgaaaaaacatttcaagaaggatgcaataactgtgtcaaatactgtcaagtct
agatttttgaagcccgaaagccggaaagaggctcttgtctgtaactttatgctctgcggt
agtgccttttacctgaggccatgggccctcagtggtctatggtttctttgtctagcctca
tgggtttctccattgcatgggcagactttcagccaaagcctcaaggaccctatgccgatt
tctggagctctttctctatgcagtgccctcatctccacactgttccttacaaattctagc
ccctttgtcctcctctcatctgatttctgtctcttcaatttagatatttctttaatggga
aaaatgtacctcaaaacatcacctatgcaagcagaaacacctgagatacaagcagagtat
aaattccagatgggtgctgaggaatcgcaaatgagcgtgcataaggaactttctgaaacc
atgtcaagtattctccagattgaacaagaggatatagaatggggaccctcagaagcagaa
agcatagtatttaaacctcaggaaatttcgcaagttcagccagcagaggaattaagtaaa
cctttggaagatggacagcccacaagtgattcaaaagaagccaagtgggtgtctttaacg
gtcagagggaagcccactcccctgaaggatgagtcccaggacaagcagcatttaccacaa
gctgactga