GENSCAN 1.0	Date run:  4-Nov-116	Time: 12:15:07

Sequence gi568815588f:7955656_8174020 : 218365 bp : 44.50% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   8265  10143 1879  1  1   97   97  1508 0.508 139.93
 1.02 Intr +  53423  53675  253  2  1  105   62   313 0.137  27.84
 1.03 Intr +  58076  58182  107  1  2   28  105   115 0.987   6.21
 1.04 Term +  58982  59096  115  2  1   69   49   156 0.999   7.84
 1.05 PlyA +  59379  59384    6                               1.05

 2.03 PlyA -  59417  59412    6                               1.05
 2.02 Term -  59984  59914   71  0  2   50   41    71 0.005  -3.30
 2.01 Init -  68075  67979   97  2  1  101   40   104 0.594   6.37
 2.00 Prom -  68200  68161   40                              -1.86

 3.00 Prom +  70231  70270   40                              -5.76
 3.01 Init +  71326  71353   28  0  1   26  115    34 0.470  -0.34
 3.02 Intr +  79511  79702  192  0  0   52   -4   160 0.046   2.66
 3.03 Intr +  86399  86470   72  0  0   92   66    46 0.008   2.18
 3.04 Intr +  94417  94529  113  2  2   73   90    44 0.018   3.20
 3.05 Intr +  95251  95338   88  0  1   85   68    62 0.020   3.44
 3.06 Intr +  99855 100241  387  1  0   81  113   375 0.017  34.06
 3.07 Intr + 102650 103186  537  0  0  127   91   616 0.999  58.69
 3.08 Intr + 108338 108483  146  0  2   97  119    95 0.965  13.50
 3.09 Intr + 113818 113943  126  0  0   94  101    78 0.994  10.58
 3.10 Intr + 125228 125407  180  1  0   38   89   136 0.447   8.76
 3.11 Term + 128039 128149  111  1  0   76   49    45 0.286  -2.04
 3.12 PlyA + 128489 128494    6                               1.05

 4.03 PlyA - 128647 128642    6                              -0.45
 4.02 Term - 140703 140405  299  1  2   81   41   171 0.920   7.13
 4.01 Init - 142358 142343   16  2  1   78  105    22 0.842   3.41
 4.00 Prom - 151163 151124   40                              -5.46

 5.00 Prom + 152507 152546   40                              -3.76
 5.01 Init + 169088 169223  136  1  1   56   26   108 0.059   1.71
 5.02 Intr + 186586 186690  105  2  0   42  105    90 0.150   6.29
 5.03 Term + 194374 194624  251  2  2   80   45    77 0.034  -1.53
 5.04 PlyA + 194820 194825    6                               1.05

 6.00 Prom + 198202 198241   40                              -6.26
 6.01 Sngl + 205605 206027  423  2  0   64   44   332 0.987  22.70
 6.02 PlyA + 212004 212009    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  93964  93869   96  1  0   51   37   207 0.874  10.21
S.002 Init + 100001 100241  241  1  1   97  113   354 0.931  36.84


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:7955656_8174020|GENSCAN_predicted_peptide_1|784_aa
XEEEEQVPTDGGTSAEAMQVPLEEDDELEEEEIINDENFLGKRPLDSPEAEELPAMKRPR
LLSTKGDTLDVVLLEAREPLSSINTQKIPPMLSPVHVQDSTDLAPPSPEPPMLAPVAKSQ
MPTAKPLETKSFTPKTKTKTSSPGQKTKSPKTAQSPAMVGSPIRSPKTVSKEKKSPGRSK
SPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSEKISKETIQVKQIQTPPDAGKLNSENQ
PKKAVVADKTIEASIDAVIARACAEREPDPFEFSSGSESEGDIFTSPKRISGPECTTPKA
STSANNFTKSGSTPLPLSGGTSSSDNSWTMDASIDEVVRKAKLGTPSNMPPNFPYISSPS
VSPPTPEPLHKVYEEKTKLPSSVEVKKKLKKELKTKMKKKEKQRDREREKDKNKDKSKEK
DKVKEKEKDKETGRETKYPWKEFLKEEEADPYKFKIKEFEDVDPKVKLKDGLVRKEKEKH
KDKKKDREKGKKDKDKREKEKVKDKGREDKMKAPAPPLVLPPKELALPLFSPATASRVPA
MLPSLLPVLPEKLFEEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEKREREKREKE
KEKHKHEKVSSFSFLALSEQSPSEKHSVISKVVPAPEAKPAPSQNRPKTPPPAPAPAPGP
MLVSPAPVPLPLLAQAAAGPALLPSPGPAASGASAKAPVRSVVTETVSTYVIRDEWGNQI
WICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMTAPPEEMQWFCPKCANKKKDKKHKKRK
HRAH

>gi568815588f:7955656_8174020|GENSCAN_predicted_CDS_1|2355_bp
naagaagaagaagagcaggtgcccactgatggaggcacatcagcagaagccatgcaggtt
cccttggaagaagatgatgaattggaggaggaagaaattattaatgatgagaatttcctg
ggcaagagaccactggatagtcctgaagctgaagaactgccagccatgaagcggcctcgg
ctattaagcactaaaggggacacgctagatgttgtgttattggaagctcgagagccactc
agctcaataaatactcaaaagatcccaccaatgctttctccagtccatgtacaggacagt
acagacttggcacctccctcacccgagccgccaatgttggctccagttgcaaaatcacaa
atgccaactgcaaaaccattagaaacaaagtcatttacacctaaaacaaagactaaaact
agctctccaggacagaagactaaatcacctaaaaccgcccagtcaccagcaatggtcgga
agtcctattcgatcaccaaaaactgtatccaaagaaaagaaatcacctggacgttccaag
agccccaagagtcccaagagccccaaggtcacgactcacattccccaaacacctgtgaga
cctgaaacgcccaacaggactccttcagctacactcagtgaaaaaatcagtaaagagact
atccaggtaaaacaaatacagacaccccctgatgctgggaaactgaacagtgagaatcag
ccgaaaaaggctgtggtagcagataaaacgattgaggcctctatcgatgctgtgattgca
cgagcctgtgctgagcgagagccagatcctttcgaattttcttctggatcggaatctgaa
ggagacatttttactagccctaagagaatttcaggcccggagtgtactactcccaaagct
tccacttccgcgaacaatttcacaaagtcaggatccactcctctgcctctttccggtgga
acctcaagttccgataactcatggacaatggatgcctccattgatgaggttgtacgtaaa
gcaaaactgggaacaccttcaaatatgccccccaactttccttatatctcttctccgtca
gtgtctcctcccactcccgaacctctccacaaggtgtatgaggagaaaaccaagctgcct
tcctccgtggaggtaaagaagaagttgaaaaaggaactaaagactaaaatgaaaaagaaa
gaaaagcagagagatagggagagggaaaaagacaagaacaaggacaaaagtaaggagaag
gataaagtgaaagagaaagagaaagacaaggaaactggcagggaaacaaagtatccctgg
aaggaatttcttaaagaggaagaggcagatccctacaagtttaaaatcaaagaatttgaa
gatgttgatcccaaagtgaaattgaaagatggacttgtgaggaaggagaaagagaagcat
aaagataagaagaaagatagagagaaaggcaagaaagataaagataagagagagaaagaa
aaagtgaaagataaaggcagagaagataagatgaaagccccagcacccccactggtgttg
cccccaaaagagttggccctgcccttgttcagccctgccacagcctccagggtcccagcc
atgctgccatctttgttgccagtgcttccggaaaaactgtttgaggagaaagagaaggtg
aaggagaaagaaaagaaaaaggacaaaaaggagaagaagaaaaagaaggaaaaagagaag
gagaagaaggagaaggaaagagagaaagagaagagagagcgagagaagagagaaaaagag
aaggagaaacacaagcatgaaaaagtaagcagtttctcatttttggccctatctgaacag
agtcctagtgagaaacacagtgtcatcagcaaggtggtccctgcccccgaggccaagccg
gcgccctcgcagaacaggccgaagaccccaccgccggcccccgcgcccgcccccggcccc
atgctcgtcagccctgcgcccgtgccgctgccgctgctcgcccaggccgccgcgggccct
gccctgctgccctccccgggtcccgccgcctccggggccagtgccaaagcccccgtgcgc
agcgtggtgactgagacggtcagcacctacgtgatccgagatgagtggggcaatcagatc
tggatctgccctgggtgtaacaagcctgacgatgggagtcccatgattgggtgtgacgac
tgcgatgactggtaccactggccctgtgttggaatcatgactgcacccccagaagagatg
cagtggttctgccccaagtgtgcgaacaagaagaaggacaaaaagcacaagaagaggaag
catcgagcccactga

>gi568815588f:7955656_8174020|GENSCAN_predicted_peptide_2|55_aa
MQLVRKYGYAVSASWTSLLPGHGKDEDDNEGEALFLSSVITDLAEITVDFRESQN

>gi568815588f:7955656_8174020|GENSCAN_predicted_CDS_2|168_bp
atgcagttggtgaggaagtatggctatgctgtgagtgcttcctggaccagcctccttcct
ggccatgggaaagatgaggatgacaatgaaggagaagccttgtttctgtccagcgtcatt
acagacctggctgaaatcacagtggatttcagagaaagccagaattaa

>gi568815588f:7955656_8174020|GENSCAN_predicted_peptide_3|659_aa
MEPPNGFTQDVATASSHPEGPSHPEVVREDPDGRIGQWRDPWSSRLLCRCVNDRDTQGNP
YQHRAGQRYPAPPPGSALNPHLRSMNARPGTKGYKAGVALYNSHTEGKASKERSRRLPKR
TLPSAQPRPLFQSAPVGQRAGARGRFSRHLGPAELAWKRRLPGSAFPSPHRKQIIQRPPT
LRRQEPPDLPGGPPSLPARGFRARREGASTAEAMEVTADQPRWVSHHHPAVLNGQHPDTH
HPGLSHSYMDAAQYPLPEEVDVLFNIDGQGNHVPPYYGNSVRATVQRYPPTHHGSQVCRP
PLLHGSLPWLDGGKALGSHHTASPWNLSPFSKTSIHHGSPGPLSVYPPASSSSLSGGHAS
PHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDEKECLKYQVPLPDSMKLESSHSRGSMTA
LGGASSSTHHPITTYPPYVPEYSSGLFPPSSLLGGSPTGFGCKSRPKARSSTEGRECVNC
GATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTTTT
LWRRNANGDPVCNACGLYYKLHNLPRQPPPTVTANSEQTLPGFPAIANPMILSQELCDFP
PLQVDHSQAGHMSWPVFDKFETQSPESAHSSITSHIHKGGEGEAAASLPAARTDHQQLR

>gi568815588f:7955656_8174020|GENSCAN_predicted_CDS_3|1980_bp
atggagccacccaacggctttacacaagacgtggccaccgcctcttctcatcccgaaggt
cccagccatcccgaggtggtcagagaagaccccgacgggcggatcgggcagtggagagac
ccgtggtcctcgcgcctgctgtgtcgctgtgtcaatgaccgtgacactcagggcaatcct
taccaacacagagcaggacaacgataccccgcacccccccctggttcagctctgaatcca
cacctgagaagcatgaacgcccgcccagggacaaagggctacaaggctggtgtcgccctt
tacaattcccacaccgaaggcaaagcaagcaaggaaagaagccggcgcctccccaagcgg
accctcccttccgcgcagcctcggccactcttccagagcgccccggtcgggcagcgcgcg
ggcgcccggggccgcttctcccggcacctcggccccgcggagctcgcctggaagcgccgg
ttgcctggctctgccttcccatccccccaccgaaagcaaatcattcaacgacccccgacc
ctccgacggcaggagccccccgacctcccaggcggaccgccctccctccccgcgcgcggg
ttccgggcccggcgagagggcgcgagcacagccgaggccatggaggtgacggcggaccag
ccgcgctgggtgagccaccaccaccccgccgtgctcaacgggcagcacccggacacgcac
cacccgggcctcagccactcctacatggacgcggcgcagtacccgctgccggaggaggtg
gatgtgctttttaacatcgacggtcaaggcaaccacgtcccgccctactacggaaactcg
gtcagggccacggtgcagaggtaccctccgacccaccacgggagccaggtgtgccgcccg
cctctgcttcatggatccctaccctggctggacggcggcaaagccctgggcagccaccac
accgcctccccctggaatctcagccccttctccaagacgtccatccaccacggctccccg
gggcccctctccgtctaccccccggcctcgtcctcctccttgtcggggggccacgccagc
ccgcacctcttcaccttcccgcccaccccgccgaaggacgtctccccggacccatcgctg
tccaccccaggctcggccggctcggcccggcaggacgagaaagagtgcctcaagtaccag
gtgcccctgcccgacagcatgaagctggagtcgtcccactcccgtggcagcatgaccgcc
ctgggtggagcctcctcgtcgacccaccaccccatcaccacctacccgccctacgtgccc
gagtacagctccggactcttcccccccagcagcctgctgggcggctcccccaccggcttc
ggatgcaagtccaggcccaaggcccggtccagcacagaaggcagggagtgtgtgaactgt
ggggcaacctcgaccccactgtggcggcgagatggcacgggacactacctgtgcaacgcc
tgcgggctctatcacaaaatgaacggacagaaccggcccctcattaagcccaagcgaagg
ctgtctgcagccaggagagcagggacgtcctgtgcgaactgtcagaccaccacaaccaca
ctctggaggaggaatgccaatggggaccctgtctgcaatgcctgtgggctctactacaag
cttcacaatcttccaagacagcctccacccacagtcacagccaactctgagcagacgctg
cctggctttcccgccatcgccaacccgatgatcctgagccaggagctctgtgactttcct
ccactccaggtagaccattcccaggccgggcacatgagctggcccgtctttgataaattt
gagacccagagtccagagtcagctcactcctccattacgtcgcacatccacaaaggaggg
gaaggagaggcagcggcatcgctgcccgccgcacggacggatcaccagcagctccgatga

>gi568815588f:7955656_8174020|GENSCAN_predicted_peptide_4|104_aa
MGPKPGSTKASGGPAQDNSHDPSTLYTALNLNPNTLTHYASHTAGLMQKSLQIVISRGSR
CGHRSCSLSLQNCNPACHSGTYGPGPINCHQATDGCSSPPDSDD

>gi568815588f:7955656_8174020|GENSCAN_predicted_CDS_4|315_bp
atggggcccaagcctggatccaccaaagcttcaggtggacctgctcaggataactcacat
gacccctcgacgctgtacacagctttaaatctgaacccaaatacactcacccattatgcg
agccacactgccggtttgatgcaaaaatccctgcagattgtcatcagtcgtggttcacgc
tgtggtcaccgcagctgttctttgtcattgcagaattgcaaccctgcatgtcactctggg
acatatggccctgggcctataaactgccaccaggccaccgacggctgctcctcaccgcct
gacagtgatgattaa

>gi568815588f:7955656_8174020|GENSCAN_predicted_peptide_5|163_aa
MNGGEFDSKVSLRLWALYGSICTKHHSECGKLMQMNYREVALVCSRRFDIAIFLVKELGP
EKCSKAMFFQNLPVSFGFESARCLSVPADVEEGTKALPGHLLRQQRCLQDGSFPLMVYDP
PSSYLGPASRLKNENERNSQTHVDPGSEAICSLRAMAKCRAFD

>gi568815588f:7955656_8174020|GENSCAN_predicted_CDS_5|492_bp
atgaatggaggggagtttgactctaaagtcagcctcaggctttgggcactgtatggctcc
atctgcaccaagcaccatagtgaatgtgggaagttaatgcagatgaattaccgagaagtg
gctctagtgtgctccagaagatttgacattgccatctttttggtcaaggagctgggacct
gagaagtgtagcaaggctatgttttttcagaaccttcccgtttcttttggatttgagtct
gctaggtgccttagcgtgcccgctgatgttgaggaggggacaaaagccctccctggccac
cttctgaggcagcagaggtgcctgcaagatggtagctttcctcttatggtttacgatcct
ccttcttcctacctggggccagcgagcaggctaaagaacgaaaatgagcggaatagtcag
acgcacgttgatccggggtctgaagcaatctgcagcctcagagctatggcaaaatgcaga
gcgtttgactga

>gi568815588f:7955656_8174020|GENSCAN_predicted_peptide_6|140_aa
MANRTLKDAHSVRGTNPQYLVGKIIRMRICESKHWKEECFGLMAELVVDNAMELMFVGGE
YGGNIKPTPFLCLILKMLQIQSEKGITAEFIENEDFKYVHMLGALYMRLMGTAIDCYKYL
EPLYNDYRKIKSQNRNGGLN

>gi568815588f:7955656_8174020|GENSCAN_predicted_CDS_6|423_bp
atggctaaccgtacactgaaggatgcgcacagcgtccgcggcaccaaccctcaatatctg
gtggggaagatcattcgaatgcgaatctgtgagtccaagcactggaaagaggagtgcttt
ggacttatggctgaacttgtagtcgataacgccatggagttaatgtttgtgggtggcgaa
tatggtggcaacataaaaccaacaccctttctgtgtttaatcttgaagatgcttcagatt
caatccgagaaaggtatcactgcagagtttatagaaaatgaagatttcaagtatgtccac
atgttgggggcactttacatgaggctgatgggcactgcaattgattgctacaagtacttg
gagcctttgtacaatgactatcgaaaaatcaagagccagaacagaaatgggggtttgaac
tga