FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8342, 348 aa 1>>>pF1KB8342 348 - 348 aa - 348 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2836+/-0.000512; mu= 16.1886+/- 0.032 mean_var=119.9424+/-31.267, 0's: 0 Z-trim(109.4): 632 B-trim: 1835 in 2/50 Lambda= 0.117108 statistics sampled from 16769 (17571) to 16769 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.553), E-opt: 0.2 (0.206), width: 16 Scan time: 6.640 The best scores are: opt bits E(85289) NP_000530 (OMIM: 136880,180380,610445,613731) rhod ( 348) 2347 408.6 1.1e-113 NP_001699 (OMIM: 190900,613522) short-wave-sensiti ( 348) 1085 195.4 1.6e-49 NP_000504 (OMIM: 300821,303700,303800) medium-wave ( 364) 1002 181.4 2.8e-45 NP_064445 (OMIM: 300822,303700,303900) long-wave-s ( 364) 994 180.0 7e-45 NP_055137 (OMIM: 606695) opsin-3 [Homo sapiens] ( 402) 596 112.8 1.3e-24 NP_006574 (OMIM: 605224) visual pigment-like recep ( 337) 547 104.4 3.6e-22 NP_859528 (OMIM: 609042) opsin-5 [Homo sapiens] ( 354) 449 87.9 3.6e-17 XP_016865905 (OMIM: 609042) PREDICTED: opsin-5 iso ( 408) 449 88.0 4e-17 NP_001166031 (OMIM: 182455) somatostatin receptor ( 364) 431 84.9 3e-16 NP_001044 (OMIM: 182455) somatostatin receptor typ ( 364) 431 84.9 3e-16 XP_016865900 (OMIM: 609042) PREDICTED: opsin-5 iso ( 298) 419 82.7 1.1e-15 NP_001048 (OMIM: 162321) substance-K receptor [Hom ( 398) 418 82.7 1.5e-15 NP_150598 (OMIM: 606665) melanopsin isoform 1 [Hom ( 478) 411 81.7 3.7e-15 XP_016872445 (OMIM: 606665) PREDICTED: melanopsin ( 528) 411 81.7 4e-15 XP_016872446 (OMIM: 606665) PREDICTED: melanopsin ( 405) 399 79.5 1.4e-14 NP_001025186 (OMIM: 606665) melanopsin isoform 2 [ ( 489) 399 79.6 1.5e-14 XP_016872444 (OMIM: 606665) PREDICTED: melanopsin ( 539) 399 79.7 1.6e-14 NP_001041 (OMIM: 182452) somatostatin receptor typ ( 369) 393 78.5 2.6e-14 NP_001049 (OMIM: 162323) substance-P receptor isof ( 407) 387 77.5 5.6e-14 NP_001050 (OMIM: 162332,614840) neuromedin-K recep ( 465) 383 76.9 9.7e-14 NP_005949 (OMIM: 600665) melatonin receptor type 1 ( 350) 378 75.9 1.5e-13 NP_001138757 (OMIM: 600018) mu-type opioid recepto ( 389) 378 76.0 1.6e-13 NP_001008504 (OMIM: 600018) mu-type opioid recepto ( 392) 378 76.0 1.6e-13 NP_001138755 (OMIM: 600018) mu-type opioid recepto ( 397) 378 76.0 1.6e-13 NP_000905 (OMIM: 600018) mu-type opioid receptor i ( 400) 378 76.0 1.6e-13 NP_001138756 (OMIM: 600018) mu-type opioid recepto ( 403) 378 76.0 1.6e-13 NP_001138754 (OMIM: 600018) mu-type opioid recepto ( 406) 378 76.0 1.6e-13 NP_001272452 (OMIM: 600018) mu-type opioid recepto ( 414) 378 76.0 1.6e-13 NP_001008503 (OMIM: 600018) mu-type opioid recepto ( 418) 378 76.0 1.6e-13 NP_001138758 (OMIM: 600018) mu-type opioid recepto ( 420) 378 76.0 1.6e-13 NP_001008505 (OMIM: 600018) mu-type opioid recepto ( 446) 378 76.0 1.7e-13 NP_001272453 (OMIM: 600018) mu-type opioid recepto ( 493) 378 76.1 1.8e-13 NP_001138751 (OMIM: 600018) mu-type opioid recepto ( 493) 378 76.1 1.8e-13 NP_004215 (OMIM: 300207) melatonin-related recepto ( 617) 378 76.2 2.1e-13 NP_056542 (OMIM: 162323) substance-P receptor isof ( 311) 363 73.3 7.9e-13 NP_001040 (OMIM: 182451) somatostatin receptor typ ( 391) 350 71.2 4.2e-12 XP_005263088 (OMIM: 162641) PREDICTED: neuropeptid ( 384) 348 70.9 5.2e-12 XP_011530312 (OMIM: 162641) PREDICTED: neuropeptid ( 384) 348 70.9 5.2e-12 NP_000900 (OMIM: 162641) neuropeptide Y receptor t ( 384) 348 70.9 5.2e-12 NP_000904 (OMIM: 602548) nociceptin receptor isofo ( 370) 342 69.9 1e-11 XP_016883343 (OMIM: 602548) PREDICTED: nociceptin ( 370) 342 69.9 1e-11 NP_001186948 (OMIM: 602548) nociceptin receptor is ( 370) 342 69.9 1e-11 NP_872588 (OMIM: 602548) nociceptin receptor isofo ( 370) 342 69.9 1e-11 NP_000903 (OMIM: 165196) kappa-type opioid recepto ( 380) 342 69.9 1e-11 XP_016883342 (OMIM: 602548) PREDICTED: nociceptin ( 388) 342 69.9 1.1e-11 XP_016883341 (OMIM: 602548) PREDICTED: nociceptin ( 388) 342 69.9 1.1e-11 XP_011527130 (OMIM: 602548) PREDICTED: nociceptin ( 388) 342 69.9 1.1e-11 NP_001305782 (OMIM: 602548) nociceptin receptor is ( 399) 342 69.9 1.1e-11 NP_001305426 (OMIM: 165196) kappa-type opioid rece ( 409) 342 69.9 1.1e-11 NP_001043 (OMIM: 182454) somatostatin receptor typ ( 388) 341 69.7 1.2e-11 >>NP_000530 (OMIM: 136880,180380,610445,613731) rhodopsi (348 aa) initn: 2347 init1: 2347 opt: 2347 Z-score: 2162.3 bits: 408.6 E(85289): 1.1e-113 Smith-Waterman score: 2347; 100.0% identity (100.0% similar) in 348 aa overlap (1-348:1-348) 10 20 30 40 50 60 pF1KB8 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB8 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI 250 260 270 280 290 300 310 320 330 340 pF1KB8 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA :::::::::::::::::::::::::::::::::::::::::::::::: NP_000 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA 310 320 330 340 >>NP_001699 (OMIM: 190900,613522) short-wave-sensitive o (348 aa) initn: 1064 init1: 1038 opt: 1085 Z-score: 1010.0 bits: 195.4 E(85289): 1.6e-49 Smith-Waterman score: 1085; 45.9% identity (77.5% similar) in 338 aa overlap (9-346:9-341) 10 20 30 40 50 60 pF1KB8 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY ::. :.: ..: .:.. :::..: : : . ::.: ....:::.: ..: NP_001 MRKMSEEEFYL-FKNISSV--GPWDGPQYHIAPVWAFYLQAAFMGTVFLIGFPLNAMVLV 10 20 30 40 50 70 80 90 100 110 120 pF1KB8 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG .:...:::: ::::::.:.. . ... . . .. .: .:::::: : ::::..:.. NP_001 ATLRYKKLRQPLNYILVNVSFGGFLLCIFSVFPVFVASCNGYFVFGRHVCALEGFLGTVA 60 70 80 90 100 110 130 140 150 160 170 180 pF1KB8 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP : .. :::. ::.:::.:.:::..::::. .::. : ::..... . ::. ::::.:: NP_001 GLVTGWSLAFLAFERYIVICKPFGNFRFSSKHALTVVLATWTIGIGVSIPPFFGWSRFIP 120 130 140 150 160 170 190 200 210 220 230 240 pF1KB8 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES :::::::: :.::. . .::.. ..:. : .:. .: : : ::. ..: .::::::: NP_001 EGLQCSCGPDWYTVGTKYRSESYTWFLFIFCFIVPLSLICFSYTQLLRALKAVAAQQQES 180 190 200 210 220 230 250 260 270 280 290 300 pF1KB8 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI :::::::.::.:::..:: .: .:.::::. :.:. .... .. ..:::.::.::: : NP_001 ATTQKAEREVSRMVVVMVGSFCVCYVPYAAFAMYMVNNRNHGLDLRLVTIPSFFSKSACI 240 250 260 270 280 290 310 320 330 340 pF1KB8 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA :::.:: .:::::. :.. .: :: . :. . . .:::.: :. NP_001 YNPIIYCFMNKQFQACIMKMVC-GKA-MTDESDTCSSQKTEVSTVSSTQVGPN 300 310 320 330 340 >>NP_000504 (OMIM: 300821,303700,303800) medium-wave-sen (364 aa) initn: 977 init1: 977 opt: 1002 Z-score: 934.0 bits: 181.4 E(85289): 2.8e-45 Smith-Waterman score: 1002; 44.3% identity (74.2% similar) in 345 aa overlap (2-346:21-359) 10 20 30 40 pF1KB8 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLA ..:.. : ::.: :.::: :.:..: : . . . NP_000 MAQQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNST---RGPFEGPNYHIAPRWVYHLTS 10 20 30 40 50 50 60 70 80 90 100 pF1KB8 AYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHG ..:..... . : :.: .:.. :::: :::.::.::::::: .. . : .. ....: NP_000 VWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISVVNQVYG 60 70 80 90 100 110 110 120 130 140 150 160 pF1KB8 YFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTW :::.: : :::. ..: : .::::.... ::..:::::..: :: . ::.:.::.: NP_000 YFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGNVRFDAKLAIVGIAFSW 120 130 140 150 160 170 170 180 190 200 210 220 pF1KB8 VMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFF . : . .:::. ::::: :.::. ::: : .. . . .:..: ..:. :. :: . NP_000 IWAAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIVL 180 190 200 210 220 230 230 240 250 260 270 280 pF1KB8 CYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGS :: :. .... .: ::.:: .::::::::::::..::.:: .:: ::: : . .. : NP_000 CYLQVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMVLAFCFCWGPYAFFACFAAANPGY 240 250 260 270 280 290 290 300 310 320 330 340 pF1KB8 NFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTE : :.. ..::::::::.:::::::..::.:::::.: . ::. . : ...:::: NP_000 PFHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNCILQLF--GKK-VDDGSELSSASKTE 300 310 320 330 340 350 pF1KB8 TSQVAPA .:.:. NP_000 VSSVSSVSPA 360 >>NP_064445 (OMIM: 300822,303700,303900) long-wave-sensi (364 aa) initn: 969 init1: 969 opt: 994 Z-score: 926.7 bits: 180.0 E(85289): 7e-45 Smith-Waterman score: 994; 43.5% identity (74.5% similar) in 345 aa overlap (2-346:21-359) 10 20 30 40 pF1KB8 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLA ..:.. : ::.: :.::: :.:..: : . . . NP_064 MAQQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNST---RGPFEGPNYHIAPRWVYHLTS 10 20 30 40 50 50 60 70 80 90 100 pF1KB8 AYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHG ..:..... . : :.: .:.. :::: :::.::.::::::: .. . : .. ... : NP_064 VWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSG 60 70 80 90 100 110 110 120 130 140 150 160 pF1KB8 YFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTW :::.: : :::. ..: : .::::.... ::..:::::..: :: . ::.:.::.: NP_064 YFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGNVRFDAKLAIVGIAFSW 120 130 140 150 160 170 170 180 190 200 210 220 pF1KB8 VMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFF . : . .:::. ::::: :.::. ::: : .. . . .:..: ..:. ::. ::.. NP_064 IWAAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIML 180 190 200 210 220 230 230 240 250 260 270 280 pF1KB8 CYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGS :: :. .... .: ::.:: .::::::::::::..:..:. .:: ::. : . .. : NP_064 CYLQVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGY 240 250 260 270 280 290 290 300 310 320 330 340 pF1KB8 NFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTE : :.. ..::.:::::.:::::::..::.:::::.: . ::. . : ...:::: NP_064 AFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQLF--GKK-VDDGSELSSASKTE 300 310 320 330 340 350 pF1KB8 TSQVAPA .:.:. NP_064 VSSVSSVSPA 360 >>NP_055137 (OMIM: 606695) opsin-3 [Homo sapiens] (402 aa) initn: 611 init1: 234 opt: 596 Z-score: 562.8 bits: 112.8 E(85289): 1.3e-24 Smith-Waterman score: 596; 31.6% identity (64.3% similar) in 297 aa overlap (31-322:35-325) 10 20 30 40 50 60 pF1KB8 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY : : . :: . . .:: :.:.: NP_055 NRSGGHGYWDGGGAAGAEGPAPAGTLSPAPLFSPGTYERLALLLGSIGLLGVGNNLLVLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG . . ..:::: . .:.:....::.. : : : :. . :.. .:. .:: .:: ..: NP_055 LYYKFQRLRTPTHLLLVNISLSDLLVSLFGVTFTFVSCLRNGWVWDTVGCVWDGFSGSLF 70 80 90 100 110 120 130 140 150 160 170 pF1KB8 GEIALWSLVVLAIERYV-VVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYI : ... .:.::: :::. :: . :: . : .... :...:: :. :: ::.::: NP_055 GIVSIATLTVLAYERYIRVVHARVINFSW----AWRAITYIWLYSLAWAGAPLLGWNRYI 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB8 PEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAA---- . .: .:. . ..:. :::...:. ...:. .: :::....... NP_055 LDVHGLGCTVDWKS--KDANDSSFVLFLFLGCLVVPLGVIAHCYGHILYSIRMLRCVEDL 190 200 210 220 230 240 250 260 270 280 290 pF1KB8 QQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFA : . : ::....: ..:...::.::.:: . : . . .: : . . .:: NP_055 QTIQVIKILKYEKKLAKMCFLMIFTFLVCWMPYIVICFLVVNGHGHLVTPTISIVSYLFA 240 250 260 270 280 290 300 310 320 330 340 pF1KB8 KSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA :: ..::::::..: ..:: .: .: NP_055 KSNTVYNPVIYVFMIRKFRRSLLQLLCLRLLRCQRPAKDLPAAGSEMQIRPIVMSQKDGD 300 310 320 330 340 350 >>NP_006574 (OMIM: 605224) visual pigment-like receptor (337 aa) initn: 407 init1: 407 opt: 547 Z-score: 518.9 bits: 104.4 E(85289): 3.6e-22 Smith-Waterman score: 547; 29.4% identity (66.2% similar) in 293 aa overlap (36-323:24-311) 10 20 30 40 50 60 pF1KB8 GPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQH . ...:.:... .... :...: . ... NP_006 MLRNNLGNSSDSKNEDGSVFSQTEHNIVATYLIMAGMISIISNIIVLGIFIKY 10 20 30 40 50 70 80 90 100 110 120 pF1KB8 KKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIAL :.:::: : :..::::.:. . :. . ..:.: . :: .::.. . . . : .. NP_006 KELRTPTNAIIINLAVTDIGVSSIGYPMSAASDLYGSWKFGYAGCQVYAGLNIFFGMASI 60 70 80 90 100 110 130 140 150 160 170 180 pF1KB8 WSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQC :.:.:..::...: : . :. : : . .:. .: : :. ::. : :. NP_006 GLLTVVAVDRYLTICLPDVGRRMTTNTYIGLILGAWINGLFWALMPIIGWASYAPDPTGA 120 130 140 150 160 170 190 200 210 220 230 240 pF1KB8 SCGIDYYTLKPEVNNESFVIY---MFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQ-QESA .: :.. :..::: : .....: .:. ..:.:: ......:. .... :: NP_006 TCTINWRK-----NDRSFVSYTMTVIAINFIVPLTVMFYCYYHVTLSIKHHTTSDCTESL 180 190 200 210 220 250 260 270 280 290 300 pF1KB8 TTQKAEK-EVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI . . ... .::.: .::. ::. : ::. : .. . ... : . : .::::... NP_006 NRDWSDQIDVTKMSVIMICMFLVAWSPYSIVCLWASFGDPKKIPPPMAIIAPLFAKSSTF 230 240 250 260 270 280 310 320 330 340 pF1KB8 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA ::: ::.. ::.:: ::. . : NP_006 YNPCIYVVANKKFRRAMLAMFKCQTHQTMPVTSILPMDVSQNPLASGRI 290 300 310 320 330 >>NP_859528 (OMIM: 609042) opsin-5 [Homo sapiens] (354 aa) initn: 452 init1: 275 opt: 449 Z-score: 429.2 bits: 87.9 E(85289): 3.6e-17 Smith-Waterman score: 449; 27.7% identity (63.0% similar) in 289 aa overlap (35-316:30-316) 10 20 30 40 50 60 pF1KB8 EGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLI-VLGFPINFLTLYVTV :. ...:.... .: .:. : .::.. NP_859 MALNHTALPQDERLPHYLRDGDPFASKLSWEADLVAGFYLTIIGILSTFGNGYVLYMSS 10 20 30 40 50 70 80 90 100 110 120 pF1KB8 QHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEI ..:: : . . .:::: :: . . : :. . . .::: :: :. . . : NP_859 RRKKKLRPAEIMTINLAVCDLGISVVGKPFTIISCFCHRWVFGWIGCRWYGWAGFFFGCG 60 70 80 90 100 110 130 140 150 160 170 180 pF1KB8 ALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGL .: ........::. .: . . ..:: . .: :..: .. ::.: . :.:: . NP_859 SLITMTAVSLDRYLKICYLSYGVWLKRKHAYICLAAIWAYASFWTTMPLVGLGDYVPEPF 120 130 140 150 160 170 190 200 210 220 230 pF1KB8 QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVK----EAAAQQQE :: .:.. . :... :.. .. . .: .: : : ... :: :.: ... NP_859 GTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSR 180 190 200 210 220 230 240 250 260 270 280 290 pF1KB8 SATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFY-IFTHQGSNFGPIFMTI-PAFFAKS ... : ..:...... .::: :.::: :. . : . : :: ... :...::: NP_859 IHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSI--PIQLSVVPTLLAKS 240 250 260 270 280 290 300 310 320 330 340 pF1KB8 AAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA ::.:::.:: ... .: : NP_859 AAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKSSAVLEIHEEWE 300 310 320 330 340 350 >>XP_016865905 (OMIM: 609042) PREDICTED: opsin-5 isoform (408 aa) initn: 452 init1: 275 opt: 449 Z-score: 428.5 bits: 88.0 E(85289): 4e-17 Smith-Waterman score: 449; 27.7% identity (63.0% similar) in 289 aa overlap (35-316:30-316) 10 20 30 40 50 60 pF1KB8 EGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLI-VLGFPINFLTLYVTV :. ...:.... .: .:. : .::.. XP_016 MALNHTALPQDERLPHYLRDGDPFASKLSWEADLVAGFYLTIIGILSTFGNGYVLYMSS 10 20 30 40 50 70 80 90 100 110 120 pF1KB8 QHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEI ..:: : . . .:::: :: . . : :. . . .::: :: :. . . : XP_016 RRKKKLRPAEIMTINLAVCDLGISVVGKPFTIISCFCHRWVFGWIGCRWYGWAGFFFGCG 60 70 80 90 100 110 130 140 150 160 170 180 pF1KB8 ALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGL .: ........::. .: . . ..:: . .: :..: .. ::.: . :.:: . XP_016 SLITMTAVSLDRYLKICYLSYGVWLKRKHAYICLAAIWAYASFWTTMPLVGLGDYVPEPF 120 130 140 150 160 170 190 200 210 220 230 pF1KB8 QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVK----EAAAQQQE :: .:.. . :... :.. .. . .: .: : : ... :: :.: ... XP_016 GTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSR 180 190 200 210 220 230 240 250 260 270 280 290 pF1KB8 SATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFY-IFTHQGSNFGPIFMTI-PAFFAKS ... : ..:...... .::: :.::: :. . : . : :: ... :...::: XP_016 IHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSI--PIQLSVVPTLLAKS 240 250 260 270 280 290 300 310 320 330 340 pF1KB8 AAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA ::.:::.:: ... .: : XP_016 AAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKSSAVLEIHEEDKGRL 300 310 320 330 340 350 >>NP_001166031 (OMIM: 182455) somatostatin receptor type (364 aa) initn: 381 init1: 114 opt: 431 Z-score: 412.6 bits: 84.9 E(85289): 3e-16 Smith-Waterman score: 431; 29.4% identity (64.1% similar) in 309 aa overlap (38-336:40-333) 10 20 30 40 50 60 pF1KB8 NFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLI-VLGFPINFLTLYVTVQHK ..:. ..::. . :. : :..::... NP_001 PSWNASSPGAASGGGDNRTLVGPAPSAGARAVLVPVLYLLVCAAGLGGNTLVIYVVLRFA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 KLRTPLNYILLNLAVADLFMVLG-GFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIAL :..: : .:::::::....:: : .: .. ... :::. : : . .. .. NP_001 KMKTVTNIYILNLAVADVLYMLGLPFLATQNAA--SFWPFGPVLCRLVMTLDGVNQFTSV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 WSLVVLAIERYVVVCKPMSNFRFGENH-AIMGVAFTWVMALACAAPPLAGWSRYIPEGLQ . :.:....::..: .:.:. :. . . : .. : .::..: : . :: .. . :: NP_001 FCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSL-CMSLPLLVFAD-VQEGGT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 CSCGIDYYTLKPE---VNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESA :. . :: . . :.:: :. : :...: .:: :...:: :: . . NP_001 CNASW------PEPVGLWGAVFIIYTAVLGFFAPLLVICLCY--LLIVVKVRAAGVRVGC 190 200 210 220 230 250 260 270 280 290 pF1KB8 TTQKAEKEVTRMVIIMVIAFLICWVPYASVAFY----IFTHQGSNFGPIFMTIPAFFAKS . ...:..:::::...:..: ::.:. .: . . .. .. : :... .:.: NP_001 VRRRSERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFVVILSYANS 240 250 260 270 280 290 300 310 320 330 340 pF1KB8 AAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA : :::.: ... .::. . ..: :. : .:.:: NP_001 CA--NPVLYGFLSDNFRQSFQKVLCLRKGS-GAKDADATEPRPDRIRQQQEATPPAHRAA 300 310 320 330 340 350 NP_001 ANGLMQTSKL 360 >>NP_001044 (OMIM: 182455) somatostatin receptor type 5 (364 aa) initn: 381 init1: 114 opt: 431 Z-score: 412.6 bits: 84.9 E(85289): 3e-16 Smith-Waterman score: 431; 29.4% identity (64.1% similar) in 309 aa overlap (38-336:40-333) 10 20 30 40 50 60 pF1KB8 NFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLI-VLGFPINFLTLYVTVQHK ..:. ..::. . :. : :..::... NP_001 PSWNASSPGAASGGGDNRTLVGPAPSAGARAVLVPVLYLLVCAAGLGGNTLVIYVVLRFA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 KLRTPLNYILLNLAVADLFMVLG-GFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIAL :..: : .:::::::....:: : .: .. ... :::. : : . .. .. NP_001 KMKTVTNIYILNLAVADVLYMLGLPFLATQNAA--SFWPFGPVLCRLVMTLDGVNQFTSV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 WSLVVLAIERYVVVCKPMSNFRFGENH-AIMGVAFTWVMALACAAPPLAGWSRYIPEGLQ . :.:....::..: .:.:. :. . . : .. : .::..: : . :: .. . :: NP_001 FCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSL-CMSLPLLVFAD-VQEGGT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 CSCGIDYYTLKPE---VNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESA :. . :: . . :.:: :. : :...: .:: :...:: :: . . NP_001 CNASW------PEPVGLWGAVFIIYTAVLGFFAPLLVICLCY--LLIVVKVRAAGVRVGC 190 200 210 220 230 250 260 270 280 290 pF1KB8 TTQKAEKEVTRMVIIMVIAFLICWVPYASVAFY----IFTHQGSNFGPIFMTIPAFFAKS . ...:..:::::...:..: ::.:. .: . . .. .. : :... .:.: NP_001 VRRRSERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFVVILSYANS 240 250 260 270 280 290 300 310 320 330 340 pF1KB8 AAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA : :::.: ... .::. . ..: :. : .:.:: NP_001 CA--NPVLYGFLSDNFRQSFQKVLCLRKGS-GAKDADATEPRPDRIRQQQEATPPAHRAA 300 310 320 330 340 350 NP_001 ANGLMQTSKL 360 348 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 11:56:12 2016 done: Fri Nov 4 11:56:13 2016 Total Scan time: 6.640 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]