Result of FASTA (omim) for pF1KB8325
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8325, 206 aa
  1>>>pF1KB8325 206 - 206 aa - 206 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1909+/-0.000415; mu= 14.4265+/- 0.026
 mean_var=94.7028+/-19.353, 0's: 0 Z-trim(113.0): 451  B-trim: 0 in 0/54
 Lambda= 0.131793
 statistics sampled from 21689 (22219) to 21689 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.637), E-opt: 0.2 (0.261), width:  16
 Scan time:  3.710

The best scores are:                                      opt bits E(85289)
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 1358 268.4   6e-72
NP_001243339 (OMIM: 602207,614222) ras-related pro ( 235)  985 197.5 1.5e-50
NP_001243344 (OMIM: 602207,614222) ras-related pro ( 182)  973 195.1   6e-50
NP_001243340 (OMIM: 602207,614222) ras-related pro ( 197)  813 164.7 9.1e-41
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212)  576 119.7 3.5e-27
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216)  571 118.7 6.9e-27
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205)  557 116.0 4.2e-26
NP_001243341 (OMIM: 602207,614222) ras-related pro ( 142)  548 114.2 1.1e-25
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201)  545 113.8   2e-25
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201)  542 113.2   3e-25
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200)  539 112.6 4.4e-25
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207)  528 110.5 1.9e-24
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203)  525 110.0 2.8e-24
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244)  521 109.3 5.4e-24
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215)  520 109.0 5.7e-24
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207)  518 108.6 7.2e-24
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203)  517 108.4 8.1e-24
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203)  517 108.4 8.1e-24
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203)  517 108.4 8.1e-24
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203)  517 108.4 8.1e-24
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215)  509 106.9 2.4e-23
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219)  501 105.4   7e-23
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219)  501 105.4   7e-23
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220)  500 105.2   8e-23
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220)  500 105.2   8e-23
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256)  496 104.6 1.5e-22
NP_001294982 (OMIM: 605455) ras-related protein Ra ( 190)  485 102.3 5.3e-22
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219)  485 102.4 5.8e-22
XP_016873867 (OMIM: 612565) PREDICTED: ras-related ( 237)  480 101.5 1.2e-21
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216)  479 101.2 1.3e-21
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218)  478 101.1 1.5e-21
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223)  476 100.7 1.9e-21
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196)  475 100.4   2e-21
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228)  475 100.5 2.2e-21
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218)  473 100.1 2.8e-21
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225)  473 100.1 2.9e-21
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227)  473 100.1 2.9e-21
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216)  471 99.7 3.6e-21
NP_001229573 (OMIM: 179509) ras-related protein Ra ( 188)  462 97.9 1.1e-20
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215)  462 98.0 1.2e-20
NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208)  458 97.2   2e-20
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216)  458 97.2   2e-20
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216)  458 97.2   2e-20
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216)  458 97.2   2e-20
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216)  458 97.2   2e-20
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249)  458 97.3 2.2e-20
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213)  457 97.1 2.3e-20
NP_065724 (OMIM: 612966) ras-related protein Rab-2 ( 194)  456 96.8 2.4e-20
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213)  455 96.7   3e-20
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215)  455 96.7   3e-20


>>NP_067075 (OMIM: 602207,614222) ras-related protein Ra  (206 aa)
 initn: 1358 init1: 1358 opt: 1358  Z-score: 1412.7  bits: 268.4 E(85289): 6e-72
Smith-Waterman score: 1358; 100.0% identity (100.0% similar) in 206 aa overlap (1-206:1-206)

               10        20        30        40        50        60
pF1KB8 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 GNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 GNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN
              130       140       150       160       170       180

              190       200      
pF1KB8 QNKGVKLSHREEGQGGGACGGYCSVL
       ::::::::::::::::::::::::::
NP_067 QNKGVKLSHREEGQGGGACGGYCSVL
              190       200      

>>NP_001243339 (OMIM: 602207,614222) ras-related protein  (235 aa)
 initn: 975 init1: 975 opt: 985  Z-score: 1028.7  bits: 197.5 E(85289): 1.5e-50
Smith-Waterman score: 1290; 87.7% identity (87.7% similar) in 235 aa overlap (1-206:1-235)

               10        20        30        40        50        60
pF1KB8 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA
               10        20        30        40        50        60

                                            70        80        90 
pF1KB8 IW-----------------------------DTAGQERFRTLTPSYYRGAQGVILVYDVT
       ::                             :::::::::::::::::::::::::::::
NP_001 IWVTLHQQTANFFLKSQIGNSPILKWAMWQYDTAGQERFRTLTPSYYRGAQGVILVYDVT
               70        80        90       100       110       120

             100       110       120       130       140       150 
pF1KB8 RRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEAS
              130       140       150       160       170       180

             160       170       180       190       200      
pF1KB8 AKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLSHREEGQGGGACGGYCSVL
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLSHREEGQGGGACGGYCSVL
              190       200       210       220       230     

>>NP_001243344 (OMIM: 602207,614222) ras-related protein  (182 aa)
 initn: 973 init1: 973 opt: 973  Z-score: 1017.7  bits: 195.1 E(85289): 6e-50
Smith-Waterman score: 1149; 88.3% identity (88.3% similar) in 206 aa overlap (1-206:1-182)

               10        20        30        40        50        60
pF1KB8 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA
       ::::::::::::::::::::::::::::::::::::::                      
NP_001 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELA----------------------
               10        20        30                              

               70        80        90       100       110       120
pF1KB8 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV
         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 --DTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV
         40        50        60        70        80        90      

              130       140       150       160       170       180
pF1KB8 GNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN
        100       110       120       130       140       150      

              190       200      
pF1KB8 QNKGVKLSHREEGQGGGACGGYCSVL
       ::::::::::::::::::::::::::
NP_001 QNKGVKLSHREEGQGGGACGGYCSVL
        160       170       180  

>>NP_001243340 (OMIM: 602207,614222) ras-related protein  (197 aa)
 initn: 825 init1: 810 opt: 813  Z-score: 852.9  bits: 164.7 E(85289): 9.1e-41
Smith-Waterman score: 813; 96.2% identity (98.5% similar) in 133 aa overlap (1-133:1-131)

               10        20        30        40        50        60
pF1KB8 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 GNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN
       ::::::  :.:..                                               
NP_001 GNKIDK--RQVQKPVMVYNVPLKNLLKRSFRPLDCGKVRTRIKESNCHTGKKAKEEEPVV
                130       140       150       160       170        

>>NP_002856 (OMIM: 179509) ras-related protein Rab-2A is  (212 aa)
 initn: 545 init1: 514 opt: 576  Z-score: 609.0  bits: 119.7 E(85289): 3.5e-27
Smith-Waterman score: 592; 47.6% identity (73.6% similar) in 208 aa overlap (9-203:7-211)

               10        20        30        40        50        60
pF1KB8 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA
               .: .:::..::::: :::.:::  :.:    ::::.: .. :..::.. :: 
NP_002   MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQ
                 10        20        30        40        50        

               70        80        90       100       110       120
pF1KB8 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV
       :::::::: ::..: :::::: :..::::.:::::: .: .::.. . . . : .: ::.
NP_002 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSN-MVIMLI
       60        70        80        90       100       110        

               130       140       150       160           170     
pF1KB8 GNKIDKENR-EVDRNEGLKFARKHSMLFIEASAKTCDGVQCAF----EELVEKIIQTPGL
       ::: : :.: :: ..::  :::.:...:.:.:::: ..:. ::    .:. ::: .  :.
NP_002 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQE--GV
       120       130       140       150       160       170       

         180       190               200      
pF1KB8 WESENQNKGVKLSHREEG--------QGGGACGGYCSVL
       .. .:. .:.:.. .. .        :::   :: :   
NP_002 FDINNEANGIKIGPQHAATNATHAGNQGGQQAGGGCC  
         180       190       200       210    

>>NP_116235 (OMIM: 607466) ras-related protein Rab-2B is  (216 aa)
 initn: 505 init1: 505 opt: 571  Z-score: 603.7  bits: 118.7 E(85289): 6.9e-27
Smith-Waterman score: 571; 48.4% identity (77.1% similar) in 188 aa overlap (9-191:7-191)

               10        20        30        40        50        60
pF1KB8 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA
               .: .:::..::::: :::.:::  :.:    ::::.: .. ...::.. :: 
NP_116   MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQ
                 10        20        30        40        50        

               70        80        90       100       110       120
pF1KB8 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV
       :::::::: ::..: :::::: :..::::.:::.:: .: .::.. . . . : .. ::.
NP_116 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVI-MLI
       60        70        80        90       100       110        

               130       140       150       160           170     
pF1KB8 GNKIDKENR-EVDRNEGLKFARKHSMLFIEASAKTCDGVQCAF----EELVEKIIQTPGL
       ::: : :.: .: :.::  :::.:...:.:.::::  .:. ::    .:. .:: :  ::
NP_116 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQ--GL
       120       130       140       150       160       170       

         180       190       200                
pF1KB8 WESENQNKGVKLSHREEGQGGGACGGYCSVL          
       .. .:. .:.:.. ..                         
NP_116 FDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC
         180       190       200       210      

>>NP_004152 (OMIM: 179508) ras-related protein Rab-1A is  (205 aa)
 initn: 547 init1: 460 opt: 557  Z-score: 589.6  bits: 116.0 E(85289): 4.2e-26
Smith-Waterman score: 557; 44.6% identity (73.8% similar) in 202 aa overlap (1-199:4-204)

                  10        20        30        40        50       
pF1KB8    MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKA
          :. .    .:.:.::.:::::: :::::.:::.     .:::::::..:: .::.  
NP_004 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KB8 KLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVN
       :: ::::::::::::.: ::::::.:.:.::::: ...: .. .::.:.. : ..: . .
NP_004 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASEN-VNK
               70        80        90       100       110          

       120       130        140       150       160       170      
pF1KB8 MLVGNKIDKENREV-DRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQT--PG
       .::::: :  ...: : . . .:: . .. :.:.:::.  .:. .:  .. .: .   ::
NP_004 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG
     120       130       140       150       160       170         

          180       190       200      
pF1KB8 LWESENQNKGVKLSHREEGQGGGACGGYCSVL
          .  ....::..     :.::.:       
NP_004 ATAGGAEKSNVKIQSTPVKQSGGGCC      
     180       190       200           

>>NP_001243341 (OMIM: 602207,614222) ras-related protein  (142 aa)
 initn: 921 init1: 548 opt: 548  Z-score: 582.3  bits: 114.2 E(85289): 1.1e-25
Smith-Waterman score: 795; 68.9% identity (68.9% similar) in 206 aa overlap (1-206:1-142)

               10        20        30        40        50        60
pF1KB8 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV
       ::                                                          
NP_001 IW----------------------------------------------------------
                                                                   

              130       140       150       160       170       180
pF1KB8 GNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN
             ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ------ENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN
                   70        80        90       100       110      

              190       200      
pF1KB8 QNKGVKLSHREEGQGGGACGGYCSVL
       ::::::::::::::::::::::::::
NP_001 QNKGVKLSHREEGQGGGACGGYCSVL
        120       130       140  

>>NP_006852 (OMIM: 604199) ras-related protein Rab-35 is  (201 aa)
 initn: 487 init1: 442 opt: 545  Z-score: 577.4  bits: 113.8 E(85289): 2e-25
Smith-Waterman score: 545; 46.1% identity (75.6% similar) in 193 aa overlap (1-188:1-191)

               10        20        30        40        50        60
pF1KB8 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA
       : .:    .:.::::.::::::::::::.:.::.    .:::::::..:. ..:.:.:: 
NP_006 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV
       ::::::::::::.: .::::..:::.:::::  ..::..  ::.:..  :  .:.  .::
NP_006 IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC--DDVCRILV
               70        80        90       100       110          

              130        140       150       160       170         
pF1KB8 GNKIDKENREV-DRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTP----GL
       ::: :  .:.: . ... ::: . .. ..:.:::   .:.  :. ..: ....     . 
NP_006 GNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAK
      120       130       140       150       160       170        

         180       190       200      
pF1KB8 WESENQNKGVKLSHREEGQGGGACGGYCSVL
        ....::  :::.                  
NP_006 QQQQQQNDVVKLTKNSKRKKRCC        
      180       190       200         

>>NP_112243 (OMIM: 612565) ras-related protein Rab-1B [H  (201 aa)
 initn: 515 init1: 466 opt: 542  Z-score: 574.3  bits: 113.2 E(85289): 3e-25
Smith-Waterman score: 542; 44.1% identity (73.3% similar) in 202 aa overlap (1-199:1-200)

               10        20        30        40        50        60
pF1KB8 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA
       :. .    .:.:.::.:::::: :::::.:::.     .:::::::..:: .::.  :: 
NP_112 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV
       ::::::::::::.: ::::::.:.:.::::: ....... .::.:.. : ..: . ..::
NP_112 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASEN-VNKLLV
               70        80        90       100       110          

              130        140       150       160       170         
pF1KB8 GNKIDKENREV-DRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQT--PGLWE
       ::: :  ...: : . . .:: . .. :.:.:::.  .:. ::  .. .: .   ::   
NP_112 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-A
     120       130       140       150       160       170         

       180       190       200      
pF1KB8 SENQNKGVKLSHREEGQGGGACGGYCSVL
       : ..  ..:..      .::.:       
NP_112 SGGERPNLKIDSTPVKPAGGGCC      
      180       190       200       




206 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 11:45:50 2016 done: Fri Nov  4 11:45:51 2016
 Total Scan time:  3.710 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com