Result of FASTA (omim) for pF1KB8295
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8295, 473 aa
  1>>>pF1KB8295 473 - 473 aa - 473 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.2152+/-0.000383; mu= 10.8534+/- 0.024
 mean_var=257.2641+/-54.047, 0's: 0 Z-trim(120.3): 1953  B-trim: 127 in 1/58
 Lambda= 0.079962
 statistics sampled from 33124 (35416) to 33124 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.752), E-opt: 0.2 (0.415), width:  16
 Scan time:  5.980

The best scores are:                                      opt bits E(85289)
XP_005250625 (OMIM: 601261) PREDICTED: zinc finger ( 473) 3321 396.6 7.8e-110
NP_666019 (OMIM: 601261) zinc finger and SCAN doma ( 473) 3321 396.6 7.8e-110
XP_006716176 (OMIM: 601261) PREDICTED: zinc finger ( 473) 3321 396.6 7.8e-110
XP_016868073 (OMIM: 601261) PREDICTED: zinc finger ( 473) 3321 396.6 7.8e-110
XP_016868074 (OMIM: 601261) PREDICTED: zinc finger ( 450) 1784 219.3 1.8e-56
XP_016866753 (OMIM: 616474) PREDICTED: zinc finger ( 478) 1114 142.0 3.4e-33
NP_001104509 (OMIM: 616474) zinc finger and SCAN d ( 478) 1114 142.0 3.4e-33
XP_016866748 (OMIM: 600834) PREDICTED: zinc finger ( 485) 1110 141.6 4.8e-33
XP_016866747 (OMIM: 600834) PREDICTED: zinc finger ( 485) 1110 141.6 4.8e-33
XP_016866749 (OMIM: 600834) PREDICTED: zinc finger ( 485) 1110 141.6 4.8e-33
NP_003438 (OMIM: 600834) zinc finger protein 165 [ ( 485) 1110 141.6 4.8e-33
XP_011513177 (OMIM: 602246) PREDICTED: zinc finger ( 583)  998 128.8 4.1e-29
NP_689908 (OMIM: 300627) zinc finger protein 449 [ ( 518)  957 123.9   1e-27
XP_011529614 (OMIM: 300627) PREDICTED: zinc finger ( 518)  957 123.9   1e-27
NP_001276331 (OMIM: 604077) zinc finger protein 13 ( 616)  958 124.2   1e-27
XP_016882731 (OMIM: 604077) PREDICTED: zinc finger ( 621)  958 124.2   1e-27
XP_016882730 (OMIM: 604077) PREDICTED: zinc finger ( 628)  958 124.2   1e-27
XP_016882729 (OMIM: 604077) PREDICTED: zinc finger ( 658)  958 124.2 1.1e-27
NP_001276330 (OMIM: 604077) zinc finger protein 13 ( 658)  958 124.2 1.1e-27
XP_006723425 (OMIM: 604077) PREDICTED: zinc finger ( 670)  958 124.2 1.1e-27
XP_005259268 (OMIM: 604077) PREDICTED: zinc finger ( 670)  958 124.2 1.1e-27
XP_006723426 (OMIM: 604077) PREDICTED: zinc finger ( 670)  958 124.2 1.1e-27
NP_003427 (OMIM: 604077) zinc finger protein 135 i ( 670)  958 124.2 1.1e-27
NP_009065 (OMIM: 604077) zinc finger protein 135 i ( 682)  958 124.2 1.1e-27
XP_011513176 (OMIM: 602240) PREDICTED: zinc finger ( 391)  932 120.9 6.4e-27
NP_001265050 (OMIM: 602240) zinc finger protein wi ( 391)  932 120.9 6.4e-27
NP_001265051 (OMIM: 602240) zinc finger protein wi ( 391)  932 120.9 6.4e-27
XP_011513175 (OMIM: 602240) PREDICTED: zinc finger ( 391)  932 120.9 6.4e-27
XP_016866755 (OMIM: 602240) PREDICTED: zinc finger ( 578)  932 121.1   8e-27
XP_011513172 (OMIM: 602240) PREDICTED: zinc finger ( 578)  932 121.1   8e-27
NP_006289 (OMIM: 602240) zinc finger protein with  ( 578)  932 121.1   8e-27
NP_001265048 (OMIM: 602240) zinc finger protein wi ( 578)  932 121.1   8e-27
XP_016885222 (OMIM: 300573) PREDICTED: zinc finger ( 513)  925 120.3 1.3e-26
XP_016885221 (OMIM: 300573) PREDICTED: zinc finger ( 513)  925 120.3 1.3e-26
XP_011542247 (OMIM: 300573) PREDICTED: zinc finger ( 514)  925 120.3 1.3e-26
XP_016885219 (OMIM: 300573) PREDICTED: zinc finger ( 514)  925 120.3 1.3e-26
XP_016885220 (OMIM: 300573) PREDICTED: zinc finger ( 514)  925 120.3 1.3e-26
XP_016885217 (OMIM: 300573) PREDICTED: zinc finger ( 514)  925 120.3 1.3e-26
XP_016885218 (OMIM: 300573) PREDICTED: zinc finger ( 514)  925 120.3 1.3e-26
XP_011542246 (OMIM: 300573) PREDICTED: zinc finger ( 545)  925 120.3 1.4e-26
NP_001139763 (OMIM: 300573) zinc finger protein 67 ( 575)  925 120.3 1.4e-26
NP_001177346 (OMIM: 300573) zinc finger protein 67 ( 576)  925 120.3 1.4e-26
XP_011542245 (OMIM: 300573) PREDICTED: zinc finger ( 580)  925 120.3 1.4e-26
NP_001034980 (OMIM: 300573) zinc finger protein 67 ( 581)  925 120.3 1.4e-26
XP_011542243 (OMIM: 300573) PREDICTED: zinc finger ( 581)  925 120.3 1.4e-26
NP_001273627 (OMIM: 194552) zinc finger protein 79 ( 364)  921 119.6 1.5e-26
XP_006717342 (OMIM: 194552) PREDICTED: zinc finger ( 474)  921 119.7 1.7e-26
NP_001309189 (OMIM: 194552) zinc finger protein 79 ( 474)  921 119.7 1.7e-26
NP_001273625 (OMIM: 194552) zinc finger protein 79 ( 474)  921 119.7 1.7e-26
NP_001273626 (OMIM: 194552) zinc finger protein 79 ( 474)  921 119.7 1.7e-26


>>XP_005250625 (OMIM: 601261) PREDICTED: zinc finger and  (473 aa)
 initn: 3321 init1: 3321 opt: 3321  Z-score: 2092.9  bits: 396.6 E(85289): 7.8e-110
Smith-Waterman score: 3321; 100.0% identity (100.0% similar) in 473 aa overlap (1-473:1-473)

               10        20        30        40        50        60
pF1KB8 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
              370       380       390       400       410       420

              430       440       450       460       470   
pF1KB8 CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
              430       440       450       460       470   

>>NP_666019 (OMIM: 601261) zinc finger and SCAN domain-c  (473 aa)
 initn: 3321 init1: 3321 opt: 3321  Z-score: 2092.9  bits: 396.6 E(85289): 7.8e-110
Smith-Waterman score: 3321; 100.0% identity (100.0% similar) in 473 aa overlap (1-473:1-473)

               10        20        30        40        50        60
pF1KB8 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_666 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_666 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_666 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_666 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_666 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_666 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_666 QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
              370       380       390       400       410       420

              430       440       450       460       470   
pF1KB8 CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_666 CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
              430       440       450       460       470   

>>XP_006716176 (OMIM: 601261) PREDICTED: zinc finger and  (473 aa)
 initn: 3321 init1: 3321 opt: 3321  Z-score: 2092.9  bits: 396.6 E(85289): 7.8e-110
Smith-Waterman score: 3321; 100.0% identity (100.0% similar) in 473 aa overlap (1-473:1-473)

               10        20        30        40        50        60
pF1KB8 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
              370       380       390       400       410       420

              430       440       450       460       470   
pF1KB8 CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
              430       440       450       460       470   

>>XP_016868073 (OMIM: 601261) PREDICTED: zinc finger and  (473 aa)
 initn: 3321 init1: 3321 opt: 3321  Z-score: 2092.9  bits: 396.6 E(85289): 7.8e-110
Smith-Waterman score: 3321; 100.0% identity (100.0% similar) in 473 aa overlap (1-473:1-473)

               10        20        30        40        50        60
pF1KB8 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
              370       380       390       400       410       420

              430       440       450       460       470   
pF1KB8 CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
              430       440       450       460       470   

>>XP_016868074 (OMIM: 601261) PREDICTED: zinc finger and  (450 aa)
 initn: 1778 init1: 1778 opt: 1784  Z-score: 1134.9  bits: 219.3 E(85289): 1.8e-56
Smith-Waterman score: 1784; 89.3% identity (92.3% similar) in 300 aa overlap (1-300:1-293)

               10        20        30        40        50        60
pF1KB8 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
       ::::::::::::::::::::::....        :   ::     .: ... .     ::
XP_016 CVNLENEKGTKPPLQEAGSKKGEHTLG-------RNLTCAPSVGKLSATAQTSPSTTEHT
              250       260              270       280       290   

              310       320       330       340       350       360
pF1KB8 GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
                                                                   
XP_016 WWTGPMTVSVEKLLGRAQTFLNIRECTQKRRHISAKIVARLSAGKAASFVTIGSTLGRSL
           300       310       320       330       340       350   

>>XP_016866753 (OMIM: 616474) PREDICTED: zinc finger and  (478 aa)
 initn: 1611 init1: 704 opt: 1114  Z-score: 716.9  bits: 142.0 E(85289): 3.4e-33
Smith-Waterman score: 1137; 43.4% identity (67.6% similar) in 438 aa overlap (46-466:52-472)

          20        30        40        50        60        70     
pF1KB8 PPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPREALSQLRVLCCEWLR
                                     ..:::. :..: :::::::.:: :: .::.
XP_016 RVVREDHYSTWEQGFKLQGNSKGLGQEPLCKQFRQLRYEETTGPREALSRLRELCQQWLQ
              30        40        50        60        70        80 

          80        90       100       110       120       130     
pF1KB8 PEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLLEDLERELDEPGHQVS
       :: :::::::::::::::: :::.:::: :::: ::: :..:..::::. .: : :.:  
XP_016 PETHTKEQILELLVLEQFLIILPKELQARVQEHHPESREDVVVVLEDLQLDLGETGQQDP
              90       100       110       120       130       140 

         140       150       160       170       180       190     
pF1KB8 TPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYIQESGEEQEFAQDPRK
         :..:: . :...         ...: :  .. :. :   :   .:.::: .. .    
XP_016 DQPKKQKILVEEMAPL-------KGVQEQ--QVRHECEVTKPE--KEKGEETRIENGKLI
             150              160         170         180       190

            200       210       220       230       240       250  
pF1KB8 V--RDC-RLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQCVNLENEKGTKP
       :   .: :. .. . :   .  .:. .:.          ::. ..: .: . :..   . 
XP_016 VVTDSCGRVESSGKISEPMEAHNEGSNLERH------QAKPKEKIEYKCSEREQRFIQHL
              200       210       220             230       240    

             260            270              280       290         
pF1KB8 PLQE-AGSKKGR---ES--VPTKPTPGERRYI-------CAECGKAFSNSSNLTKHRRTH
        : : :... :.   ::    ..   :... .       : ::::::. ::.:..:.. :
XP_016 DLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVRHQKIH
          250       260       270       280       290       300    

     300       310       320       330        340       350        
pF1KB8 TGEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDC-KCGKAFGQSSDLLKHQRMHTEEA
        ::::: :..:::.::....:  : : :  ..:: : .::: : .:: : .:::.:..: 
XP_016 LGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRIHSQEE
          310       320       330       340       350       360    

      360       370       380       390       400       410        
pF1KB8 PYQCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKC
       : .::.:::.::    : .: :::.  : .:::::::.::  . :  :.:.::::::.::
XP_016 PCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGEKPFKC
          370       380       390       400       410       420    

      420       430       440       450       460       470   
pF1KB8 KECGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
       . : :::  .:.. .: :::. :::: : .::..: ..:.: .::: :       
XP_016 NICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA 
          430       440       450       460       470         

>>NP_001104509 (OMIM: 616474) zinc finger and SCAN domai  (478 aa)
 initn: 1611 init1: 704 opt: 1114  Z-score: 716.9  bits: 142.0 E(85289): 3.4e-33
Smith-Waterman score: 1137; 43.4% identity (67.6% similar) in 438 aa overlap (46-466:52-472)

          20        30        40        50        60        70     
pF1KB8 PPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPREALSQLRVLCCEWLR
                                     ..:::. :..: :::::::.:: :: .::.
NP_001 RVVREDHYSTWEQGFKLQGNSKGLGQEPLCKQFRQLRYEETTGPREALSRLRELCQQWLQ
              30        40        50        60        70        80 

          80        90       100       110       120       130     
pF1KB8 PEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLLEDLERELDEPGHQVS
       :: :::::::::::::::: :::.:::: :::: ::: :..:..::::. .: : :.:  
NP_001 PETHTKEQILELLVLEQFLIILPKELQARVQEHHPESREDVVVVLEDLQLDLGETGQQDP
              90       100       110       120       130       140 

         140       150       160       170       180       190     
pF1KB8 TPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYIQESGEEQEFAQDPRK
         :..:: . :...         ...: :  .. :. :   :   .:.::: .. .    
NP_001 DQPKKQKILVEEMAPL-------KGVQEQ--QVRHECEVTKPE--KEKGEETRIENGKLI
             150              160         170         180       190

            200       210       220       230       240       250  
pF1KB8 V--RDC-RLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQCVNLENEKGTKP
       :   .: :. .. . :   .  .:. .:.          ::. ..: .: . :..   . 
NP_001 VVTDSCGRVESSGKISEPMEAHNEGSNLERH------QAKPKEKIEYKCSEREQRFIQHL
              200       210       220             230       240    

             260            270              280       290         
pF1KB8 PLQE-AGSKKGR---ES--VPTKPTPGERRYI-------CAECGKAFSNSSNLTKHRRTH
        : : :... :.   ::    ..   :... .       : ::::::. ::.:..:.. :
NP_001 DLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVRHQKIH
          250       260       270       280       290       300    

     300       310       320       330        340       350        
pF1KB8 TGEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDC-KCGKAFGQSSDLLKHQRMHTEEA
        ::::: :..:::.::....:  : : :  ..:: : .::: : .:: : .:::.:..: 
NP_001 LGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRIHSQEE
          310       320       330       340       350       360    

      360       370       380       390       400       410        
pF1KB8 PYQCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKC
       : .::.:::.::    : .: :::.  : .:::::::.::  . :  :.:.::::::.::
NP_001 PCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGEKPFKC
          370       380       390       400       410       420    

      420       430       440       450       460       470   
pF1KB8 KECGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
       . : :::  .:.. .: :::. :::: : .::..: ..:.: .::: :       
NP_001 NICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA 
          430       440       450       460       470         

>>XP_016866748 (OMIM: 600834) PREDICTED: zinc finger pro  (485 aa)
 initn: 1812 init1: 587 opt: 1110  Z-score: 714.3  bits: 141.6 E(85289): 4.8e-33
Smith-Waterman score: 1169; 42.1% identity (68.0% similar) in 478 aa overlap (17-469:14-481)

               10        20        30                 40        50 
pF1KB8 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKE---------EKGKYLPSLEMFRQRFRQF
                       :... : :.::.::.:         .... : . :. :: ::::
XP_016    MATEPKKAAAQNSPEDE-GLLIVKIEEEEFIHGQDTCLQRSELLKQ-ELCRQLFRQF
                  10         20        30        40         50     

              60        70        80        90       100       110 
pF1KB8 GYHDTPGPREALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPE
        :.:.::::::::.:: :::.::.::::::::::::::::::::::: .:::::.:: ::
XP_016 CYQDSPGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPE
          60        70        80        90       100       110     

             120       130       140       150       160       170 
pF1KB8 SAEEAVTLLEDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHK
       :.:::::.::::::  ::   ::..  . :.   .:.:  : :     ... ::.::. .
XP_016 SGEEAVTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPAL----NVKLQPVETKAH
         120       130       140       150           160       170 

             180       190       200       210         220         
pF1KB8 YESWGPLYIQESGEEQEFAQDPRKVRDCRLSTQHEESADEQKG--SEAEGLKGDIISVII
       ..:  :  . .  .:.: ...  :..  .   ...  . . .:  ::: : . :: .   
XP_016 FDSSEPQLLWDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAG
             180       190       200       210       220       230 

     230          240       250       260                 270      
pF1KB8 ANK---PEASLERQCVNLENEKGTKPPLQEAGSKKG----------RESVPTKPTPGERR
         :    . : : : ..  ...:    : . .. .:          : .. ..    .. 
XP_016 RVKRQWEKESGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKS
             240       250       260       270       280       290 

        280       290       300       310       320       330      
pF1KB8 YICAECGKAFSNSSNLTKHRRTHTGEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDC-
          . : ..:. .:.. .:.  ..::: .   . ::.:. : .:. :  .   :. ..: 
XP_016 CKHGTCDQSFKWNSDFINHQIIYAGEKNH---QYGKSFK-SPKLAKHAAVFSGDKTHQCN
             300       310       320           330       340       

         340       350       360       370       380       390     
pF1KB8 KCGKAFGQSSDLLKHQRMHTEEAPYQCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGK
       .::::: .:: : .:::.:: :  :.:..:::.:. ...: :: ::::::.:. :.:::.
XP_016 ECGKAFRHSSKLARHQRIHTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGR
       350       360       370       380       390       400       

         400       410       420       430       440       450     
pF1KB8 SFSQHAGLSSHQRLHTGEKPYKCKECGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCS
       .:. .. :  :::.:: ::::.:.::::.:  ::.. .: ::::::::: : .::..: .
XP_016 AFNLNSHLIRHQRIHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQ
       410       420       430       440       450       460       

         460       470   
pF1KB8 KSNLSKHQRVHTGEGEAP
       .::::.:::.:  :    
XP_016 SSNLSQHQRIHMRENLLM
       470       480     

>>XP_016866747 (OMIM: 600834) PREDICTED: zinc finger pro  (485 aa)
 initn: 1812 init1: 587 opt: 1110  Z-score: 714.3  bits: 141.6 E(85289): 4.8e-33
Smith-Waterman score: 1169; 42.1% identity (68.0% similar) in 478 aa overlap (17-469:14-481)

               10        20        30                 40        50 
pF1KB8 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKE---------EKGKYLPSLEMFRQRFRQF
                       :... : :.::.::.:         .... : . :. :: ::::
XP_016    MATEPKKAAAQNSPEDE-GLLIVKIEEEEFIHGQDTCLQRSELLKQ-ELCRQLFRQF
                  10         20        30        40         50     

              60        70        80        90       100       110 
pF1KB8 GYHDTPGPREALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPE
        :.:.::::::::.:: :::.::.::::::::::::::::::::::: .:::::.:: ::
XP_016 CYQDSPGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPE
          60        70        80        90       100       110     

             120       130       140       150       160       170 
pF1KB8 SAEEAVTLLEDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHK
       :.:::::.::::::  ::   ::..  . :.   .:.:  : :     ... ::.::. .
XP_016 SGEEAVTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPAL----NVKLQPVETKAH
         120       130       140       150           160       170 

             180       190       200       210         220         
pF1KB8 YESWGPLYIQESGEEQEFAQDPRKVRDCRLSTQHEESADEQKG--SEAEGLKGDIISVII
       ..:  :  . .  .:.: ...  :..  .   ...  . . .:  ::: : . :: .   
XP_016 FDSSEPQLLWDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAG
             180       190       200       210       220       230 

     230          240       250       260                 270      
pF1KB8 ANK---PEASLERQCVNLENEKGTKPPLQEAGSKKG----------RESVPTKPTPGERR
         :    . : : : ..  ...:    : . .. .:          : .. ..    .. 
XP_016 RVKRQWEKESGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKS
             240       250       260       270       280       290 

        280       290       300       310       320       330      
pF1KB8 YICAECGKAFSNSSNLTKHRRTHTGEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDC-
          . : ..:. .:.. .:.  ..::: .   . ::.:. : .:. :  .   :. ..: 
XP_016 CKHGTCDQSFKWNSDFINHQIIYAGEKNH---QYGKSFK-SPKLAKHAAVFSGDKTHQCN
             300       310       320           330       340       

         340       350       360       370       380       390     
pF1KB8 KCGKAFGQSSDLLKHQRMHTEEAPYQCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGK
       .::::: .:: : .:::.:: :  :.:..:::.:. ...: :: ::::::.:. :.:::.
XP_016 ECGKAFRHSSKLARHQRIHTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGR
       350       360       370       380       390       400       

         400       410       420       430       440       450     
pF1KB8 SFSQHAGLSSHQRLHTGEKPYKCKECGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCS
       .:. .. :  :::.:: ::::.:.::::.:  ::.. .: ::::::::: : .::..: .
XP_016 AFNLNSHLIRHQRIHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQ
       410       420       430       440       450       460       

         460       470   
pF1KB8 KSNLSKHQRVHTGEGEAP
       .::::.:::.:  :    
XP_016 SSNLSQHQRIHMRENLLM
       470       480     

>>XP_016866749 (OMIM: 600834) PREDICTED: zinc finger pro  (485 aa)
 initn: 1812 init1: 587 opt: 1110  Z-score: 714.3  bits: 141.6 E(85289): 4.8e-33
Smith-Waterman score: 1169; 42.1% identity (68.0% similar) in 478 aa overlap (17-469:14-481)

               10        20        30                 40        50 
pF1KB8 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKE---------EKGKYLPSLEMFRQRFRQF
                       :... : :.::.::.:         .... : . :. :: ::::
XP_016    MATEPKKAAAQNSPEDE-GLLIVKIEEEEFIHGQDTCLQRSELLKQ-ELCRQLFRQF
                  10         20        30        40         50     

              60        70        80        90       100       110 
pF1KB8 GYHDTPGPREALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPE
        :.:.::::::::.:: :::.::.::::::::::::::::::::::: .:::::.:: ::
XP_016 CYQDSPGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPE
          60        70        80        90       100       110     

             120       130       140       150       160       170 
pF1KB8 SAEEAVTLLEDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHK
       :.:::::.::::::  ::   ::..  . :.   .:.:  : :     ... ::.::. .
XP_016 SGEEAVTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPAL----NVKLQPVETKAH
         120       130       140       150           160       170 

             180       190       200       210         220         
pF1KB8 YESWGPLYIQESGEEQEFAQDPRKVRDCRLSTQHEESADEQKG--SEAEGLKGDIISVII
       ..:  :  . .  .:.: ...  :..  .   ...  . . .:  ::: : . :: .   
XP_016 FDSSEPQLLWDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAG
             180       190       200       210       220       230 

     230          240       250       260                 270      
pF1KB8 ANK---PEASLERQCVNLENEKGTKPPLQEAGSKKG----------RESVPTKPTPGERR
         :    . : : : ..  ...:    : . .. .:          : .. ..    .. 
XP_016 RVKRQWEKESGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKS
             240       250       260       270       280       290 

        280       290       300       310       320       330      
pF1KB8 YICAECGKAFSNSSNLTKHRRTHTGEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDC-
          . : ..:. .:.. .:.  ..::: .   . ::.:. : .:. :  .   :. ..: 
XP_016 CKHGTCDQSFKWNSDFINHQIIYAGEKNH---QYGKSFK-SPKLAKHAAVFSGDKTHQCN
             300       310       320           330       340       

         340       350       360       370       380       390     
pF1KB8 KCGKAFGQSSDLLKHQRMHTEEAPYQCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGK
       .::::: .:: : .:::.:: :  :.:..:::.:. ...: :: ::::::.:. :.:::.
XP_016 ECGKAFRHSSKLARHQRIHTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGR
       350       360       370       380       390       400       

         400       410       420       430       440       450     
pF1KB8 SFSQHAGLSSHQRLHTGEKPYKCKECGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCS
       .:. .. :  :::.:: ::::.:.::::.:  ::.. .: ::::::::: : .::..: .
XP_016 AFNLNSHLIRHQRIHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQ
       410       420       430       440       450       460       

         460       470   
pF1KB8 KSNLSKHQRVHTGEGEAP
       .::::.:::.:  :    
XP_016 SSNLSQHQRIHMRENLLM
       470       480     




473 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 11:28:58 2016 done: Fri Nov  4 11:28:59 2016
 Total Scan time:  5.980 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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