GENSCAN 1.0	Date run:  4-Nov-116	Time: 11:23:27

Sequence gi568815595f:4879719_5083689 : 203971 bp : 43.46% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7380   7524  145  2  1   86   39    73 0.059   2.06
 1.02 Intr +  25789  25869   81  2  0   60   66    79 0.022   2.51
 1.03 Intr +  30465  30518   54  1  0  110   42    43 0.007   0.85
 1.04 Term +  37632  38113  482  1  2   14   54   394 0.062  23.56
 1.05 PlyA +  38137  38142    6                               1.05

 2.00 Prom +  38840  38879   40                              -4.06
 2.01 Init +  39230  42189 2960  1  2   44   53   970 0.546  80.27
 2.02 Intr +  78143  78226   84  2  0   61  115    20 0.019   0.94
 2.03 Intr +  79509  79654  146  0  2    9  115    46 0.028  -0.67
 2.04 Term +  86974  87497  524  2  2  -10   42   333 0.090  13.34
 2.05 PlyA +  87958  87963    6                               1.05

 3.00 Prom +  88207  88246   40                              -5.06
 3.01 Sngl +  88580  89008  429  1  0   49   42   169 0.625   4.69
 3.02 PlyA +  89293  89298    6                               1.05

 4.00 Prom +  91714  91753   40                              -2.46
 4.01 Init + 100001 100080   80  1  2  105  110    80 0.974  11.13
 4.02 Intr + 100244 100313   70  2  1  128  121    62 0.941  12.68
 4.03 Intr + 100583 100690  108  1  0  113   98   184 0.999  22.38
 4.04 Intr + 101674 101797  124  0  1  126  105   102 0.999  15.86
 4.05 Term + 103118 103974  857  0  2  129   37   719 0.966  63.85
 4.06 PlyA + 104607 104612    6                               1.05

 5.04 PlyA - 105041 105036    6                               1.05
 5.03 Term - 140299 140163  137  2  2   85   36   109 0.693   3.58
 5.02 Intr - 142169 142053  117  0  0   42   60    90 0.454   2.04
 5.01 Init - 157558 157435  124  1  1   72   25    89 0.189   1.33
 5.00 Prom - 191848 191809   40                              -3.56

 6.04 PlyA - 193357 193352    6                               1.05
 6.03 Term - 201731 201439  293  0  2   55   38   444 0.771  31.61
 6.02 Intr - 203097 202911  187  0  1   15   34   167 0.290   3.26
 6.01 Intr - 203832 203724  109  2  1   46   31   176 0.529   7.99

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  37724  38113  390  1  0   88   54   327 0.810  25.52
S.002 Sngl - 200664 200494  171  0  0  110   54   249 0.996  18.53


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:4879719_5083689|GENSCAN_predicted_peptide_1|253_aa
EYRPLHLPNEPHLLIIFTSVEIPSFQKPPLTSDAKELLRRPARTFTDAVSSFNKGRSGFC
DTAVKEEHVKREESLAPNVVPFSEKVHKAPGPGKGKLTTRKDIYTENPSVHHHHQRPKVD
KTTKMGKKQNRKTGNSKTQSASPPPKERSSSPATEQSWMENDFDELREEGFRRSSYSELR
EDIQTKGKEVENFEKNLEECITRITNTEKCLKELMELKTKARELREECRSLRSQCDQLEE
RVSVMEDEMNEMK

>gi568815595f:4879719_5083689|GENSCAN_predicted_CDS_1|762_bp
gaatatcgtcctctccatttgcccaatgagccccacctcctcatcatttttacctctgtg
gaaatcccttccttccagaagcctccactcacttctgatgccaaggagcttctgcggcgc
cctgcacgcacctttacagatgcagtttcttctttcaacaagggtagaagcggtttctgt
gacacagctgtcaaagaagaacacgtgaagagggaagaaagtctagctcccaacgtggtc
ccattctctgagaaagtacacaaggccccggggccaggcaaaggaaaactaacaaccaga
aaggacatctacaccgaaaacccatctgtacatcaccatcatcaaagaccaaaagtagat
aaaaccacaaagatggggaaaaaacagaacagaaaaactggaaactctaaaacgcagagc
gcctctcctcctccaaaggaacgcagttcctcaccagcaacagaacaaagctggatggag
aatgattttgacgagctgagagaagaaggcttcagacgatcaagttactctgagctacgg
gaggacattcaaaccaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgt
ataactagaataaccaatacagagaagtgcttaaaggagctgatggagctgaaaaccaag
gctcgagaactacgtgaagaatgcagaagcctcaggagccaatgcgatcaactggaagaa
agggtatcagtgatggaagatgaaatgaatgaaatgaagtga

>gi568815595f:4879719_5083689|GENSCAN_predicted_peptide_2|1237_aa
MGDFNTPLSTLDRSTRQKVNKDTQELKSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYS
KIDHIVGSKALLSKCKRTEIITNYLSDHSAIKLELRIKNLTQSRSTTWKLNNLLLNDYWV
HNEMKAEIKMFFETNENKDTTYQNRWDAFKAVCRGKFIALNAYKRKQERSKIDTLTSQLK
ELEKQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIK
KKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLN
QEEVESLNRPITGSEIVAIINSLPTKKSPGLDGFTAEFYQRYKEELVPFLLKLFQSIEKE
GILPNSFYEASIILIPKLGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHD
QVGFIPGMQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGI
DGTYFKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQE
KEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFL
YTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNI
PCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAKSILS
QKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPEK
NKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLG
ITIQDIGVGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTTWEKIFAT
YSSDKGLISRIYNELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKRPMKKFSSSLAIR
EMQIKTTMRYHLTPVRMAIIKKSGNNSKRQLSGGFLPDVQGYVRLFVPYQPKQDRIKKFH
IHVVCQGRVGGGRRTKNLNAPTRRINKEKAAPKQITAKLLKSSERNSININKKDIHTKTP
SVGHHHQRPKVDKTTKVGRIQSRKAENSKNQSASSPPKDHSSSPAMEQTWTENDFDELTE
VGFRRSVITNFSELKKDVRTHCKEAKNLEKRLHEWLTRIKSVEKTLKDLMELKTMAQKLC
DACTSFRSQSDQVEERVSVIKDQMNEMKKRRSLEKKE

>gi568815595f:4879719_5083689|GENSCAN_predicted_CDS_2|3714_bp
atgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagtcaac
aaggatacccaggaattgaaatcagctctgcaccaagcagacctaatagacatctacaga
actctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacctattcc
aaaattgaccacatagttggaagtaaagctctcctcagcaaatgtaaaagaacagaaatt
ataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaatctc
actcaaagccgctcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacacc
acataccagaatcgctgggacgcattcaaagcagtgtgtagagggaaatttatagcacta
aatgcctacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaa
gaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaa
atcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaaatcaatgaatcc
aggagctggttttttgaaaggatcaacaaaattgatagaccgctagcaagactaataaag
aaaaaaagagagaagaatcaaatagacacaataaaaaatgataaaggggatatcaccacc
gatcccacagaaatacaaactaccatcagagaatactacaaacacctctacgcaaataaa
ctagaaaatctagaagaaatggatacattcctcgacacatacactctcccaagactaaac
caggaagaagtcgaatctctgaatagaccaataacaggatctgaaattgtggcaataatc
aatagtttaccaaccaaaaagagtccaggactagatggattcacagccgaattctaccag
aggtacaaggaggaactggtaccattccttctgaaactattccaatcaatagaaaaagag
ggaatcctccctaactcattttatgaggccagcatcattctgataccaaagctgggcaga
gacacaaccaaaaaagagaattttagaccaatatccttgatgaacattgatgcaaaaatc
ctcaataaaatactggcaaaccgaatccagcagcacatcaaaaagcttatccaccatgat
caagtgggcttcatccctgggatgcaaggctggttcaatatacgcaaatcaataaatgta
atccagcatataaacagagccaaagacaaaaaccacatgattatctcaatagatgcagaa
aaagcctttgacaaaattcaacaacccttcatgctaaaaactctcaataaattaggtatt
gatgggacgtatttcaaaataataagagctatctatgacaaacccacagccaatatcata
ctgaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgccct
ctctcaccgctcctattcaacatagtgttggaagttctggccagggcaatcaggcaggag
aaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagac
gacatgattgtttatctagaaaaccccatcgtctcagcccaaaatctccttaagctgata
agcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattctta
tacaccaacaacagacaaacagagagccaaatcatgagtgaactcccattcacaattgct
tcaaagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaag
gagaactacaaaccactgctcaaggaaataaaagaggacacaaacaaatggaagaacatt
ccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatt
tacagattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaa
actactttaaagttcatatggaaccaaaaaagagcccgcatcgccaagtcaatcctaagc
caaaagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggctaca
gtaaccaaaacagcatggtactggtaccaaaacagagatatagatcaatggaacagaaca
gagccctcagaaataatgccacatatctacaactatctgatctttgacaaacctgagaaa
aacaagcaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagcc
atatgtagaaagctgaaactggatcccttccttacaccttatacaaaaatcaattcaaga
tggattaaagatttaaacgttagacctaaaacaataaaaaccctagaagaaaacctaggc
attaccattcaggacataggcgtgggcaaggacttcatgtccaaaacaccaaaagcaatg
gcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagca
aaagaaactaccatcagagtgaacaggcaacctacaacatgggagaaaattttcgcaacc
tactcatctgacaaagggctaatatccagaatctacaatgaactcaaacaaatttacaag
aaaaaaacaaacaaccccatcaaaaagtgggcgaaggacatgaacagacacttctcaaaa
gaagacatttatgcagccaaaagacccatgaaaaaattctcatcatcactggccatcaga
gaaatgcaaatcaaaaccactatgagatatcatctcacaccagttagaatggcaatcatt
aaaaagtcaggaaacaacagtaagaggcagttatctgggggatttctaccagatgtacag
ggttacgtgagactatttgtaccttatcaaccaaaacaagacagaatcaagaagttccac
atccacgttgtgtgtcaggggagagttgggggtgggaggagaaccaagaaccttaacgca
cccacaaggagaataaataaggaaaaagcagcacctaaacaaatcacagccaaactgctg
aaaagcagcgaaaggaatagcatcaacatcaacaaaaaggacatccacaccaaaacccca
tctgtaggacaccatcatcaaagaccaaaggtagataaaaccacaaaggtggggagaatc
cagagcagaaaagctgaaaattctaaaaatcagagcgcctcttctcctccaaaggatcac
agctcctcaccagcaatggaacaaacctggacggagaatgactttgacgagttgacagaa
gtaggcttcagaagatcggtaataacgaacttctccgagctaaagaaggatgttcgaacc
cattgcaaagaagctaaaaaccttgaaaaaagattacacgaatggctgactagaataaag
agcgtagagaagaccttaaaggacctgatggagctgaaaaccatggcacaaaaactatgt
gacgcatgcacaagcttcaggagccaatccgatcaagtggaagaaagggtatcagtgatt
aaagatcaaatgaatgaaatgaagaaaaggagaagtttagagaagaaagagtaa

>gi568815595f:4879719_5083689|GENSCAN_predicted_peptide_3|142_aa
MGDFNAPLSTLDRSTRQKVNKDIQDLNSALHQVDLIDIYRTLHAKSTEYTFFSAPHCTYS
KIDHIVGSKALLSKCKRTEITTNCLSDHSAIKLELRIKKLTQNHAATWKLNNLLLNDYWV
NNEMKAQVKMFFETNENKDTIY

>gi568815595f:4879719_5083689|GENSCAN_predicted_CDS_3|429_bp
atgggagactttaacgccccactgtcaacattagatagatcaacgagacaaaaagttaac
aaggatatccaggacttaaactcagctctgcaccaagtggacctaatagacatctacaga
actctccacgccaaatcaacagaatatacattcttctcagcaccacattgcacttattcc
aaaattgaccacatagttggaagtaaagcactcctcagcaaatgtaaaagaacagaaatt
acaacaaactgtctctcagaccacagtgcaatcaaattagaactcaggattaagaaactc
actcaaaaccacgcagctacatggaaactgaacaacctgctcctgaatgactactgggta
aataacgaaatgaaggcacaagtaaagatgttctttgaaaccaatgagaacaaagacaca
atatactag

>gi568815595f:4879719_5083689|GENSCAN_predicted_peptide_4|412_aa
MERIPSAQPPPACLPKAPGLEHGDLPGMYPAHMYQVYKSRRGIKRSEDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIIA
LQSGLQAGELSGRNVETGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLHRVVS
ELLQGGTSRKPSDPAPKVMDFKEKPSSPAKGSEGPGKNCVPVIQRTFAHSSGEQSGSDTD
TDSGYGGESEKGDLRSEQPCFKSDHGRRFTMGERIGAIKQESEEPPTKKNRMQLSDDEGH
FTSSDLISSPFLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPVLYPGLNASAA
ALSSFMNPDKISAPLLMPQRLPSPLPAHPSVDSSVLLQALKPIPPLNLETKD

>gi568815595f:4879719_5083689|GENSCAN_predicted_CDS_4|1239_bp
atggagcggatccccagcgcgcaaccaccccccgcctgcctgcccaaagcaccgggactg
gagcacggagacctaccagggatgtaccctgcccacatgtaccaagtgtacaagtcaaga
cggggaataaagcggagcgaggacagcaaggagacctacaaattgccgcaccggctcatc
gagaaaaagagacgtgaccggattaacgagtgcatcgcccagctgaaggatctcctaccc
gaacatctcaaacttacaactttgggtcacttggaaaaagcagtggttcttgaacttacc
ttgaagcatgtgaaagcactaacaaacctaattgatcagcagcagcagaaaatcattgcc
ctgcagagtggtttacaagctggtgagctgtcagggagaaatgtcgaaacaggtcaagag
atgttctgctcaggtttccagacatgtgcccgggaggtgcttcagtatctggccaagcac
gagaacactcgggacctgaagtcttcgcagcttgtcacccacctccaccgggtggtctcg
gagctgctgcagggtggtacctccaggaagccatcagacccagctcccaaagtgatggac
ttcaaggaaaaacccagctctccggccaaaggttcggaaggtcctgggaaaaactgcgtg
ccagtcatccagcggactttcgctcactcgagtggggagcagagcggcagcgacacggac
acagacagtggctatggaggagaatcggagaagggcgacttgcgcagtgagcagccgtgc
ttcaaaagtgaccacggacgcaggttcacgatgggagaaaggatcggcgcaattaagcaa
gagtccgaagaaccccccacaaaaaagaaccggatgcagctttcggatgatgaaggccat
ttcactagcagtgacctgatcagctccccgttcctgggcccacacccacaccagcctcct
ttctgcctgcccttctacctgatcccaccttcagcgactgcctacctgcccatgctggag
aagtgctggtatcccacctcagtgccagtgctatacccaggcctcaacgcctctgccgca
gccctctctagcttcatgaacccagacaagatctcggctcccttgctcatgccccagaga
ctcccttctcccttgccagctcatccgtccgtcgactcttctgtcttgctccaagctctg
aagccaatcccccctttaaacttagaaaccaaagactaa

>gi568815595f:4879719_5083689|GENSCAN_predicted_peptide_5|125_aa
MALFATDHLAQKDDKVEPRKDMINAVNFYITVVKTQGGHLLLSQSDVVEYERSGLNRPES
KCRLFISCVALGNLLKSNRAGHNIQKVRVQEGFCEIKGELWPERKGGMVMSSHLLNTISP
EKEYE

>gi568815595f:4879719_5083689|GENSCAN_predicted_CDS_5|378_bp
atggctctctttgctactgaccacctagcccagaaggatgataaagtggagcccaggaag
gatatgatcaatgcagttaatttttatatcactgtggtcaagacacaaggcgggcacctc
cttttgagtcagtctgatgtggtggaatacgagcgctctggactcaacaggcctgagtca
aaatgtcggctcttcattagctgtgtggccttgggcaacttacttaaaagtaaccgtgcg
gggcacaacattcagaaagtccgagtccaggaaggcttttgtgagataaagggggagctg
tggccagagaggaaagggggcatggtgatgagttcacacttattaaataccatcagcccc
gagaaagagtatgaataa

>gi568815595f:4879719_5083689|GENSCAN_predicted_peptide_6|196_aa
XKDHPNLIKNAKKPDIPKKLNSPTQQLWYTHRKKDFSCAELMANKKDVPSAERMICRVAS
SGSCSPGRRRTPMCDQETKDYEAELLRFSQETAPGGAAAVGKGQQLQEEQPRFLEIELAC
TLARRWSDLSEKAKYKTREQARQGVPGTQQAAQVIKRVQIWQQSIISNYLACFKNDRVKA
SKAMDVTWNPKEENLM

>gi568815595f:4879719_5083689|GENSCAN_predicted_CDS_6|591_bp
nngaaggatcatcccaacttaatcaagaatgccaagaagccagacatccccaagaagctc
aactcccccacccagcagctgtggtacacccatcggaagaaggactttagttgcgcagag
ctcatggccaacaagaaggatgttcccagcgcggagcgcatgatatgccgtgtggccagc
agtggaagctgctctcccggaaggagaaggacgcctatgtgcgaccaggaaacaaaagat
tatgaggcggaactgctgcgtttttctcaggagactgccccaggaggagcagcagcagtg
ggaaaggggcagcagctgcaggaggagcagcctaggttcttggagatcgagctggcctgc
acgctggcccgaaggtggagtgacttgtctgagaaggccaagtacaagacccgagagcaa
gccaggcagggagtgccaggaactcagcaagccgcccaagtcatcaagagagtacagatc
tggcaacagagcatcatcagcaactacctggcctgcttcaagaacgaccgggtgaaggcc
tcgaaagccatggatgtgacctggaatcccaaggaggagaacctgatgtga