Result of FASTA (ccds) for pF1KB8282
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8282, 308 aa
  1>>>pF1KB8282 308 - 308 aa - 308 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.3020+/-0.000737; mu= 16.4774+/- 0.045
 mean_var=75.0929+/-14.656, 0's: 0 Z-trim(110.1): 37  B-trim: 4 in 1/50
 Lambda= 0.148004
 statistics sampled from 11297 (11333) to 11297 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.72), E-opt: 0.2 (0.348), width:  16
 Scan time:  1.570

The best scores are:                                      opt bits E(32554)
CCDS10950.1 ZDHHC7 gene_id:55625|Hs108|chr16       ( 308) 2190 476.5 1.1e-134
CCDS45538.1 ZDHHC7 gene_id:55625|Hs108|chr16       ( 345) 1474 323.7 1.3e-88
CCDS46811.1 ZDHHC3 gene_id:51304|Hs108|chr3        ( 299) 1366 300.5   1e-81
CCDS2724.1 ZDHHC3 gene_id:51304|Hs108|chr3         ( 327)  987 219.7 2.5e-57
CCDS6475.1 ZDHHC21 gene_id:340481|Hs108|chr9       ( 265)  422 98.9 4.4e-21
CCDS43190.1 ZDHHC19 gene_id:131540|Hs108|chr3      ( 309)  334 80.2 2.2e-15
CCDS73551.1 ZDHHC20 gene_id:253832|Hs108|chr13     ( 292)  331 79.5 3.3e-15
CCDS45017.1 ZDHHC20 gene_id:253832|Hs108|chr13     ( 354)  331 79.6 3.9e-15
CCDS81758.1 ZDHHC20 gene_id:253832|Hs108|chr13     ( 365)  331 79.6   4e-15
CCDS47810.1 ZDHHC2 gene_id:51201|Hs108|chr8        ( 367)  326 78.5 8.3e-15
CCDS55454.1 ZDHHC15 gene_id:158866|Hs108|chrX      ( 328)  321 77.4 1.6e-14
CCDS14430.1 ZDHHC15 gene_id:158866|Hs108|chrX      ( 337)  321 77.5 1.6e-14
CCDS7463.1 ZDHHC16 gene_id:84287|Hs108|chr10       ( 296)  318 76.8 2.3e-14
CCDS7461.1 ZDHHC16 gene_id:84287|Hs108|chr10       ( 361)  318 76.8 2.7e-14
CCDS6909.1 ZDHHC12 gene_id:84885|Hs108|chr9        ( 267)  315 76.1 3.3e-14
CCDS35395.1 ZDHHC9 gene_id:51114|Hs108|chrX        ( 364)  313 75.8 5.7e-14
CCDS7574.1 ZDHHC6 gene_id:64429|Hs108|chr10        ( 413)  303 73.7 2.8e-13
CCDS44946.1 ZDHHC17 gene_id:23390|Hs108|chr12      ( 632)  296 72.3 1.1e-12
CCDS7460.1 ZDHHC16 gene_id:84287|Hs108|chr10       ( 377)  287 70.2 2.7e-12
CCDS7965.1 ZDHHC5 gene_id:25921|Hs108|chr11        ( 715)  290 71.1 2.9e-12
CCDS13776.1 ZDHHC8 gene_id:29801|Hs108|chr22       ( 765)  281 69.2 1.2e-11
CCDS54502.1 ZDHHC8 gene_id:29801|Hs108|chr22       ( 778)  281 69.2 1.2e-11
CCDS33827.1 ZDHHC23 gene_id:254887|Hs108|chr3      ( 409)  270 66.6 3.6e-11
CCDS47510.1 ZDHHC14 gene_id:79683|Hs108|chr6       ( 473)  266 65.8 7.3e-11
CCDS5252.1 ZDHHC14 gene_id:79683|Hs108|chr6        ( 488)  266 65.8 7.5e-11
CCDS30650.1 ZDHHC18 gene_id:84243|Hs108|chr1       ( 388)  263 65.1 9.8e-11


>>CCDS10950.1 ZDHHC7 gene_id:55625|Hs108|chr16            (308 aa)
 initn: 2190 init1: 2190 opt: 2190  Z-score: 2531.4  bits: 476.5 E(32554): 1.1e-134
Smith-Waterman score: 2190; 100.0% identity (100.0% similar) in 308 aa overlap (1-308:1-308)

               10        20        30        40        50        60
pF1KB8 MQPSGHRLRDVEHHPLLAENDNYDSSSSSSSEADVADRVWFIRDGCGMICAVMTWLLVAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MQPSGHRLRDVEHHPLLAENDNYDSSSSSSSEADVADRVWFIRDGCGMICAVMTWLLVAY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ADFVVTFVMLLPSKDFWYSVVNGVIFNCLAVLALSSHLRTMLTDPGAVPKGNATKEYMES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ADFVVTFVMLLPSKDFWYSVVNGVIFNCLAVLALSSHLRTMLTDPGAVPKGNATKEYMES
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 LQLKPGEVIYKCPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFTM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LQLKPGEVIYKCPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFTM
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 YIALSSVHALILCGFQFISCVRGQWTECSDFSPPITVILLIFLCLEGLLFFTFTAVMFGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 YIALSSVHALILCGFQFISCVRGQWTECSDFSPPITVILLIFLCLEGLLFFTFTAVMFGT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 QIHSICNDETEIERLKSEKPTWERRLRWEGMKSVFGGPPSLLWMNPFVGFRFRRLPTRPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QIHSICNDETEIERLKSEKPTWERRLRWEGMKSVFGGPPSLLWMNPFVGFRFRRLPTRPR
              250       260       270       280       290       300

               
pF1KB8 KGGPEFSV
       ::::::::
CCDS10 KGGPEFSV
               

>>CCDS45538.1 ZDHHC7 gene_id:55625|Hs108|chr16            (345 aa)
 initn: 2176 init1: 1474 opt: 1474  Z-score: 1704.4  bits: 323.7 E(32554): 1.3e-88
Smith-Waterman score: 2069; 89.1% identity (89.1% similar) in 340 aa overlap (6-308:6-345)

               10        20        30        40        50        60
pF1KB8 MQPSGHRLRDVEHHPLLAENDNYDSSSSSSSEADVADRVWFIRDGCGMICAVMTWLLVAY
            :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MQPSGHRLRDVEHHPLLAENDNYDSSSSSSSEADVADRVWFIRDGCGMICAVMTWLLVAY
               10        20        30        40        50        60

               70        80        90       100                    
pF1KB8 ADFVVTFVMLLPSKDFWYSVVNGVIFNCLAVLALSSHLRTMLTDP---------------
       :::::::::::::::::::::::::::::::::::::::::::::               
CCDS45 ADFVVTFVMLLPSKDFWYSVVNGVIFNCLAVLALSSHLRTMLTDPEKSSDCRPSACTVKT
               70        80        90       100       110       120

                               110       120       130       140   
pF1KB8 ----------------------GAVPKGNATKEYMESLQLKPGEVIYKCPKCCCIKPERA
                             ::::::::::::::::::::::::::::::::::::::
CCDS45 GLDPTLVGICGEGTESVQSLLLGAVPKGNATKEYMESLQLKPGEVIYKCPKCCCIKPERA
              130       140       150       160       170       180

           150       160       170       180       190       200   
pF1KB8 HHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFTMYIALSSVHALILCGFQFISCVRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 HHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFTMYIALSSVHALILCGFQFISCVRG
              190       200       210       220       230       240

           210       220       230       240       250       260   
pF1KB8 QWTECSDFSPPITVILLIFLCLEGLLFFTFTAVMFGTQIHSICNDETEIERLKSEKPTWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QWTECSDFSPPITVILLIFLCLEGLLFFTFTAVMFGTQIHSICNDETEIERLKSEKPTWE
              250       260       270       280       290       300

           270       280       290       300        
pF1KB8 RRLRWEGMKSVFGGPPSLLWMNPFVGFRFRRLPTRPRKGGPEFSV
       :::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RRLRWEGMKSVFGGPPSLLWMNPFVGFRFRRLPTRPRKGGPEFSV
              310       320       330       340     

>>CCDS46811.1 ZDHHC3 gene_id:51304|Hs108|chr3             (299 aa)
 initn: 1361 init1: 1361 opt: 1366  Z-score: 1580.7  bits: 300.5 E(32554): 1e-81
Smith-Waterman score: 1366; 64.9% identity (85.5% similar) in 282 aa overlap (6-287:7-284)

                10        20        30        40        50         
pF1KB8  MQPSGHRLRDVEHHPLLAENDNYDSSSSSSSEADVADRVWFIRDGCGMICAVMTWLLVA
             :..:..:..:   :  . ..       . :.  .::::::::. ::..::.:: 
CCDS46 MMLIPTHHFRNIERKP---EYLQPEKCVPPPYPGPVGT-MWFIRDGCGIACAIVTWFLVL
               10           20        30         40        50      

      60        70        80        90       100       110         
pF1KB8 YADFVVTFVMLLPSKDFWYSVVNGVIFNCLAVLALSSHLRTMLTDPGAVPKGNATKEYME
       ::.::: ::::.::.:. ::..::..:: :: :::.:: :.::::::::::::::::..:
CCDS46 YAEFVVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIE
         60        70        80        90       100       110      

     120       130       140       150       160       170         
pF1KB8 SLQLKPGEVIYKCPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFT
       :::::::.:.::::::: :::.::::::.:::::::::::::::::::::.::..:::::
CCDS46 SLQLKPGQVVYKCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFT
        120       130       140       150       160       170      

     180       190       200       210       220       230         
pF1KB8 MYIALSSVHALILCGFQFISCVRGQWTECSDFSPPITVILLIFLCLEGLLFFTFTAVMFG
       ::::: :.::::. ::.:. : . .::.::.:::: ::::::.::.:::::. ::.::::
CCDS46 MYIALISLHALIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEGLLFLIFTSVMFG
        180       190       200       210       220       230      

     240       250       260       270       280       290         
pF1KB8 TQIHSICNDETEIERLKSEKPTWERRLRWEGMKSVFGGPPSLLWMNPFVGFRFRRLPTRP
       ::.::::.::: ::.::.:.  : .. .: .::.::: : :: : .::            
CCDS46 TQVHSICTDETGIEQLKKEERRWAKKTKWMNMKAVFGHPFSLGWASPFATPDQGKADPYQ
        240       250       260       270       280       290      

     300        
pF1KB8 RKGGPEFSV
                
CCDS46 YVV      
                

>>CCDS2724.1 ZDHHC3 gene_id:51304|Hs108|chr3              (327 aa)
 initn: 982 init1: 982 opt: 987  Z-score: 1142.8  bits: 219.7 E(32554): 2.5e-57
Smith-Waterman score: 1305; 59.4% identity (77.7% similar) in 310 aa overlap (6-287:7-312)

                10        20        30        40        50         
pF1KB8  MQPSGHRLRDVEHHPLLAENDNYDSSSSSSSEADVADRVWFIRDGCGMICAVMTWLLVA
             :..:..:..:   :  . ..       . :.  .::::::::. ::..::.:: 
CCDS27 MMLIPTHHFRNIERKP---EYLQPEKCVPPPYPGPVGT-MWFIRDGCGIACAIVTWFLVL
               10           20        30         40        50      

      60        70        80        90       100       110         
pF1KB8 YADFVVTFVMLLPSKDFWYSVVNGVIFNCLAVLALSSHLRTMLTDPGAVPKGNATKEYME
       ::.::: ::::.::.:. ::..::..:: :: :::.:: :.::::::::::::::::..:
CCDS27 YAEFVVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIE
         60        70        80        90       100       110      

     120       130       140       150       160       170         
pF1KB8 SLQLKPGEVIYKCPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFT
       :::::::.:.::::::: :::.::::::.:::::::::::::::::::::.::..:::::
CCDS27 SLQLKPGQVVYKCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFT
        120       130       140       150       160       170      

     180       190       200                                   210 
pF1KB8 MYIALSSVHALILCGFQFISCVRGQWT----------------------------ECSDF
       ::::: :.::::. ::.:. : . .::                            :::.:
CCDS27 MYIALISLHALIMVGFHFLHCFEEDWTTYGLNREEMAETGISLHEKMQPLNFSSTECSSF
        180       190       200       210       220       230      

             220       230       240       250       260       270 
pF1KB8 SPPITVILLIFLCLEGLLFFTFTAVMFGTQIHSICNDETEIERLKSEKPTWERRLRWEGM
       ::: ::::::.::.:::::. ::.::::::.::::.::: ::.::.:.  : .. .: .:
CCDS27 SPPTTVILLILLCFEGLLFLIFTSVMFGTQVHSICTDETGIEQLKKEERRWAKKTKWMNM
        240       250       260       270       280       290      

             280       290       300        
pF1KB8 KSVFGGPPSLLWMNPFVGFRFRRLPTRPRKGGPEFSV
       :.::: : :: : .::                     
CCDS27 KAVFGHPFSLGWASPFATPDQGKADPYQYVV      
        300       310       320             

>>CCDS6475.1 ZDHHC21 gene_id:340481|Hs108|chr9            (265 aa)
 initn: 431 init1: 292 opt: 422  Z-score: 492.1  bits: 98.9 E(32554): 4.4e-21
Smith-Waterman score: 423; 30.3% identity (56.9% similar) in 274 aa overlap (38-298:4-256)

        10        20        30        40        50           60    
pF1KB8 LRDVEHHPLLAENDNYDSSSSSSSEADVADRVWFIRDGCGMICA---VMTWLLVAYADFV
                                     :. :. :  :  :    :..::   :   .
CCDS64                            MGLRIHFVVDPHGWCCMGLIVFVWL---YNIVL
                                          10        20           30

           70        80           90       100       110       120 
pF1KB8 VTFVMLLPSKDFWYSVVNGV---IFNCLAVLALSSHLRTMLTDPGAVPKGNATKEYMESL
       .  ..:.:  .  .  . :.   ::  .... : . .:. .:::: .:         :. 
CCDS64 IPKIVLFPHYEEGH--IPGILIIIFYGISIFCLVALVRASITDPGRLP---------ENP
               40          50        60        70                  

             130         140       150       160       170         
pF1KB8 QLKPGEVIYK--CPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFT
       ..  ::  .   : ::  ..:.:.:::: : .:.:.:::::::.:::::: :. .:. . 
CCDS64 KIPHGEREFWELCNKCNLMRPKRSHHCSRCGHCVRRMDHHCPWINNCVGEDNHWLFLQLC
      80        90       100       110       120       130         

     180       190         200       210        220       230      
pF1KB8 MYIALSSVHALIL--CGFQFISCVRGQWTECSDFSPPITVI-LLIFLCLEGLLFFTFTAV
       .:  : . .::..  : . ..  .. .  .   :   .... :  :.   :. ...  . 
CCDS64 FYTELLTCYALMFSFCHYYYFLPLKKRNLDLFVFRHELAIMRLAAFM---GITMLVGITG
     140       150       160       170       180          190      

        240       250       260        270        280       290    
pF1KB8 MFGTQIHSICNDETEIERLKSEKPTWER-RLRWEGMKS-VFGGPPSLLWMNPFVGFRFRR
       .: ::. .: .: : ::....      : :  :.   : :::   ..::   :. :: .:
CCDS64 LFYTQLIGIITDTTSIEKMSNCCEDISRPRKPWQQTFSEVFGTRWKILW---FIPFR-QR
        200       210       220       230       240          250   

          300        
pF1KB8 LPTRPRKGGPEFSV
        : :          
CCDS64 QPLRVPYHFANHV 
            260      

>>CCDS43190.1 ZDHHC19 gene_id:131540|Hs108|chr3           (309 aa)
 initn: 347 init1: 273 opt: 334  Z-score: 389.6  bits: 80.2 E(32554): 2.2e-15
Smith-Waterman score: 334; 31.0% identity (57.9% similar) in 197 aa overlap (38-229:22-205)

        10        20        30        40        50        60       
pF1KB8 LRDVEHHPLLAENDNYDSSSSSSSEADVADRVWFIRDGCGMICAVMTWLLVAYADFVVTF
                                     : ::.    ... :  . ::: .. .  .:
CCDS43          MTLLTDATPLVKEPHPLPLVPRPWFLP---SLFAAFNVVLLVFFSGLFFAF
                        10        20           30        40        

         70         80        90       100       110         120   
pF1KB8 -VMLLPSKDFW-YSVVNGVIFNCLAVLALSSHLRTMLTDPGAVPKGNATKEYM--ESLQL
           : ..  : . :..: .:    ::.. : .   ..::: . .:.: .  .  . . .
CCDS43 PCRWLAQNGEWAFPVITGSLF----VLTFFSLVSLNFSDPGILHQGSAEQGPLTVHVVWV
       50        60            70        80        90       100    

            130       140       150       160       170       180  
pF1KB8 KPGEV-IYKCPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFTMYI
       . :   .  :::::  .: :..::  :. :.. .:::: :::::.:..: :::.:... .
CCDS43 NHGAFRLQWCPKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSL
          110       120       130       140       150       160    

            190       200       210       220       230       240  
pF1KB8 ALSSVHALILCGFQFISCVRGQWTECSDFSPPITVILLIFLCLEGLLFFTFTAVMFGTQI
        : :   :. :   .:  ::   :    ::   .. ... .   :::             
CCDS43 CLYSGAMLVTC---LIFLVR---TTHLPFSTDKAIAIVVAVSAAGLLVPLSLLLLIQALS
          170          180          190       200       210        

            250       260       270       280       290       300  
pF1KB8 HSICNDETEIERLKSEKPTWERRLRWEGMKSVFGGPPSLLWMNPFVGFRFRRLPTRPRKG
                                                                   
CCDS43 VSSADRTYKGKCRHLQGYNPFDQGCASNWYLTICAPLGPKYMAEAVQLQRVVGPDWTSMP
      220       230       240       250       260       270        

>>CCDS73551.1 ZDHHC20 gene_id:253832|Hs108|chr13          (292 aa)
 initn: 348 init1: 297 opt: 331  Z-score: 386.4  bits: 79.5 E(32554): 3.3e-15
Smith-Waterman score: 331; 34.7% identity (53.9% similar) in 193 aa overlap (127-305:60-239)

        100       110       120       130       140       150      
pF1KB8 HLRTMLTDPGAVPKGNATKEYMESLQLKPGEVIYKCPKCCCIKPERAHHCSICKRCIRKM
                                     ..:  : ::  :::.:::::: :  :: ::
CCDS73 RYEKEFSQERQQEILRRAARALPIYTTSASKTIRYCEKCQLIKPDRAHHCSACDSCILKM
      30        40        50        60        70        80         

        160       170       180       190       200        210     
pF1KB8 DHHCPWVNNCVGEKNQRFFVLFTMYIALSSVHALILCGFQFISCVRGQWT-ECSDFSPPI
       :::::::::::: .: .::.:: .:  :  . .       ::.     :: : .:    .
CCDS73 DHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVAATVLEYFIKF----WTNELTDTRAKF
      90       100       110       120       130           140     

         220       230       240       250       260       270     
pF1KB8 TVILLIFLCLEGLLFFTFTAVMFGTQIHSICNDETEIERLKSEKPTWERRLRWEGM----
        :..:.:.   . .::  .  .:. .   . ...: :: ...  ::.      .:.    
CCDS73 HVLFLFFV---SAMFFISVLSLFSYHCWLVGKNRTTIESFRA--PTFSYGPDGNGFSLGC
         150          160       170       180         190       200

                 280            290       300                      
pF1KB8 ----KSVFGGPPSLLWMNPFV-----GFRFRRLPTRPRKGGPEFSV              
           ..:::   .  :. :.      :  :   :::     ::                 
CCDS73 SKNWRQVFGDEKKY-WLLPIFSSLGDGCSF---PTRLVGMDPEQASVTNQNEYARSSGSN
              210        220          230       240       250      

CCDS73 QPFPIKPLSESKNRLLDSESQWLENGAEEGIVKSGV
        260       270       280       290  

>>CCDS45017.1 ZDHHC20 gene_id:253832|Hs108|chr13          (354 aa)
 initn: 325 init1: 297 opt: 331  Z-score: 385.3  bits: 79.6 E(32554): 3.9e-15
Smith-Waterman score: 350; 29.8% identity (51.9% similar) in 295 aa overlap (49-305:22-302)

       20        30        40        50        60        70        
pF1KB8 ENDNYDSSSSSSSEADVADRVWFIRDGCGMICAVMTWLLVAYADFVVTFVMLLPSKDFWY
                                     :  :..:   ::.  . .:...  ...   
CCDS45          MAPWTLWRCCQRVVGWVPVLFITFVVVWSYYAYVVELCVFTIF-GNEENGK
                        10        20        30        40         50

       80        90       100       110           120         130  
pF1KB8 SVVNGVIFNCLAVLALSSHLRTMLTDPGAVPK----GNATKEYMESL--QLKPGEVIYK-
       .::  : :. . :. . :.  :..:.:..  :    .:. :: .:.   : .  :.. . 
CCDS45 TVVYLVAFHLFFVMFVWSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQEILRRA
               60        70        80        90       100       110

                              140       150       160       170    
pF1KB8 -----------------CPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRF
                        : ::  :::.:::::: :  :: :::::::::::::: .: .:
CCDS45 ARALPIYTTSASKTIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKF
              120       130       140       150       160       170

          180       190       200        210       220       230   
pF1KB8 FVLFTMYIALSSVHALILCGFQFISCVRGQWT-ECSDFSPPITVILLIFLCLEGLLFFTF
       :.:: .:  :  . .       ::.     :: : .:    . :..:.:.   . .::  
CCDS45 FLLFLLYSLLYCLFVAATVLEYFIKF----WTNELTDTRAKFHVLFLFFV---SAMFFIS
              180       190           200       210          220   

           240       250       260       270               280     
pF1KB8 TAVMFGTQIHSICNDETEIERLKSEKPTWERRLRWEGM--------KSVFGGPPSLLWMN
       .  .:. .   . ...: :: ...  ::.      .:.        ..:::   .  :. 
CCDS45 VLSLFSYHCWLVGKNRTTIESFRA--PTFSYGPDGNGFSLGCSKNWRQVFGDEKKY-WLL
           230       240         250       260       270        280

              290       300                                        
pF1KB8 PFV-----GFRFRRLPTRPRKGGPEFSV                                
       :.      :  :   :::     ::                                   
CCDS45 PIFSSLGDGCSF---PTRLVGMDPEQASVTNQNEYARSGSNQPFPIKPLSESKNRLLDSE
              290          300       310       320       330       

>>CCDS81758.1 ZDHHC20 gene_id:253832|Hs108|chr13          (365 aa)
 initn: 325 init1: 297 opt: 331  Z-score: 385.1  bits: 79.6 E(32554): 4e-15
Smith-Waterman score: 350; 29.8% identity (51.9% similar) in 295 aa overlap (49-305:22-302)

       20        30        40        50        60        70        
pF1KB8 ENDNYDSSSSSSSEADVADRVWFIRDGCGMICAVMTWLLVAYADFVVTFVMLLPSKDFWY
                                     :  :..:   ::.  . .:...  ...   
CCDS81          MAPWTLWRCCQRVVGWVPVLFITFVVVWSYYAYVVELCVFTIF-GNEENGK
                        10        20        30        40         50

       80        90       100       110           120         130  
pF1KB8 SVVNGVIFNCLAVLALSSHLRTMLTDPGAVPK----GNATKEYMESL--QLKPGEVIYK-
       .::  : :. . :. . :.  :..:.:..  :    .:. :: .:.   : .  :.. . 
CCDS81 TVVYLVAFHLFFVMFVWSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQEILRRA
               60        70        80        90       100       110

                              140       150       160       170    
pF1KB8 -----------------CPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRF
                        : ::  :::.:::::: :  :: :::::::::::::: .: .:
CCDS81 ARALPIYTTSASKTIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKF
              120       130       140       150       160       170

          180       190       200        210       220       230   
pF1KB8 FVLFTMYIALSSVHALILCGFQFISCVRGQWT-ECSDFSPPITVILLIFLCLEGLLFFTF
       :.:: .:  :  . .       ::.     :: : .:    . :..:.:.   . .::  
CCDS81 FLLFLLYSLLYCLFVAATVLEYFIKF----WTNELTDTRAKFHVLFLFFV---SAMFFIS
              180       190           200       210          220   

           240       250       260       270               280     
pF1KB8 TAVMFGTQIHSICNDETEIERLKSEKPTWERRLRWEGM--------KSVFGGPPSLLWMN
       .  .:. .   . ...: :: ...  ::.      .:.        ..:::   .  :. 
CCDS81 VLSLFSYHCWLVGKNRTTIESFRA--PTFSYGPDGNGFSLGCSKNWRQVFGDEKKY-WLL
           230       240         250       260       270        280

              290       300                                        
pF1KB8 PFV-----GFRFRRLPTRPRKGGPEFSV                                
       :.      :  :   :::     ::                                   
CCDS81 PIFSSLGDGCSF---PTRLVGMDPEQASVTNQNEYARSSGSNQPFPIKPLSESKNRLLDS
              290          300       310       320       330       

>>CCDS47810.1 ZDHHC2 gene_id:51201|Hs108|chr8             (367 aa)
 initn: 267 init1: 267 opt: 326  Z-score: 379.3  bits: 78.5 E(32554): 8.3e-15
Smith-Waterman score: 326; 28.0% identity (55.3% similar) in 246 aa overlap (57-286:56-282)

         30        40        50        60        70        80      
pF1KB8 SSSSSEADVADRVWFIRDGCGMICAVMTWLLVAYADFVVTFVMLLPSKDFWYSVVNGVIF
                                     :.::    . :.:.. :  .: .. . . .
CCDS47 ITLLLGWSYYAYAIQLCIVSMENTGEQVVCLMAYH---LLFAMFVWS--YWKTIFT-LPM
          30        40        50        60             70          

         90       100       110       120               130        
pF1KB8 NCLAVLALSSHLRTMLTDPGAVPKGNATKEYMES--------LQLKPGEVIYKCPKCCCI
       :    . ::   . .:      :.:.: .: ..          .   : . : : .:  :
CCDS47 NPSKEFHLSYAEKDLLERE---PRGEAHQEVLRRAAKDLPIYTRTMSGAIRY-CDRCQLI
      80        90          100       110       120        130     

      140       150       160       170       180       190        
pF1KB8 KPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFTMYIALSSVHALILCGFQFI
       ::.: ::::.: .:: :::::::::::::: .: .::.::  :   : .. :.. . .. 
CCDS47 KPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAY---SLLYCLFIAATDLQ
         140       150       160       170          180       190  

      200       210       220       230       240       250        
pF1KB8 SCVRGQWTECSDFSPPITVILLIFLCLEGLLFFTFTAVMFGTQIHSICNDETEIERLKSE
         ..  ::  . .    . . ..:: . . .: .  . .:: .   . .... .: ..: 
CCDS47 YFIKF-WT--NGLPDTQAKFHIMFLFFAAAMFSVSLSSLFGYHCWLVSKNKSTLEAFRS-
               200       210       220       230       240         

      260       270               280       290       300          
pF1KB8 KPTWERRLRWEG--------MKSVFGGPPSLLWMNPFVGFRFRRLPTRPRKGGPEFSV  
        :....    .:        :..:::   .  :. :                        
CCDS47 -PVFRHGTDKNGFSLGFSKNMRQVFGDEKKY-WLLPIFSSLGDGCSFPTCLVNQDPEQAS
       250       260       270        280       290       300      

CCDS47 TPAGLNSTAKNLENHQFPAKPLRESQSHLLTDSQSWTESSINPGKCKAGMSNPALTMENE
        310       320       330       340       350       360      




308 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 11:21:20 2016 done: Fri Nov  4 11:21:21 2016
 Total Scan time:  1.570 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com