Result of FASTA (omim) for pF1KB8273
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8273, 277 aa
  1>>>pF1KB8273 277 - 277 aa - 277 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4350+/-0.000392; mu= 13.7611+/- 0.024
 mean_var=64.7117+/-12.959, 0's: 0 Z-trim(111.3): 30  B-trim: 0 in 0/54
 Lambda= 0.159435
 statistics sampled from 19791 (19820) to 19791 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.607), E-opt: 0.2 (0.232), width:  16
 Scan time:  5.920

The best scores are:                                      opt bits E(85289)
NP_002790 (OMIM: 604030) proteasome subunit beta t ( 277) 1801 423.2 2.6e-118
NP_002792 (OMIM: 176847) proteasome subunit beta t ( 273) 1086 258.8 8.2e-69
NP_002789 (OMIM: 600307) proteasome subunit beta t ( 239)  342 87.6 2.4e-17
NP_002791 (OMIM: 177045) proteasome subunit beta t ( 219)  316 81.6 1.4e-15
NP_001093250 (OMIM: 611137) proteasome subunit bet ( 300)  314 81.2 2.5e-15
NP_001257410 (OMIM: 600307) proteasome subunit bet ( 213)  309 80.0 4.2e-15
NP_002788 (OMIM: 600306) proteasome subunit beta t ( 263)  294 76.6 5.5e-14
NP_004150 (OMIM: 177046,256040) proteasome subunit ( 272)  284 74.3 2.8e-13
NP_683720 (OMIM: 177046,256040) proteasome subunit ( 276)  284 74.3 2.8e-13
NP_001124197 (OMIM: 600306) proteasome subunit bet ( 160)  202 55.3 8.4e-08
XP_005267928 (OMIM: 600306) PREDICTED: proteasome  ( 169)  187 51.9 9.6e-07
NP_001138404 (OMIM: 600306) proteasome subunit bet ( 203)  187 51.9 1.1e-06
NP_002787 (OMIM: 602177) proteasome subunit beta t ( 264)  160 45.8  0.0001
NP_002783 (OMIM: 606607) proteasome subunit alpha  ( 248)  159 45.5 0.00012
NP_002786 (OMIM: 602176) proteasome subunit beta t ( 205)  154 44.3 0.00022
NP_002784 (OMIM: 602017) proteasome subunit beta t ( 241)  150 43.4 0.00048
NP_001317605 (OMIM: 176846) proteasome subunit alp ( 261)  148 43.0  0.0007
NP_001096137 (OMIM: 176846) proteasome subunit alp ( 261)  148 43.0  0.0007
NP_002780 (OMIM: 176846) proteasome subunit alpha  ( 261)  148 43.0  0.0007


>>NP_002790 (OMIM: 604030) proteasome subunit beta type-  (277 aa)
 initn: 1801 init1: 1801 opt: 1801  Z-score: 2245.1  bits: 423.2 E(85289): 2.6e-118
Smith-Waterman score: 1801; 100.0% identity (100.0% similar) in 277 aa overlap (1-277:1-277)

               10        20        30        40        50        60
pF1KB8 MAAVSVYAPPVGGFSFDNCRRNAVLEADFAKRGYKLPKVRKTGTTIAGVVYKDGIVLGAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MAAVSVYAPPVGGFSFDNCRRNAVLEADFAKRGYKLPKVRKTGTTIAGVVYKDGIVLGAD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 TRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 TANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 FEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 FEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGT
              190       200       210       220       230       240

              250       260       270       
pF1KB8 RLGRYRCEKGTTAVLTEKITPLEIEVLEETVQTMDTS
       :::::::::::::::::::::::::::::::::::::
NP_002 RLGRYRCEKGTTAVLTEKITPLEIEVLEETVQTMDTS
              250       260       270       

>>NP_002792 (OMIM: 176847) proteasome subunit beta type-  (273 aa)
 initn: 1116 init1: 987 opt: 1086  Z-score: 1356.4  bits: 258.8 E(85289): 8.2e-69
Smith-Waterman score: 1086; 58.3% identity (86.5% similar) in 266 aa overlap (10-275:8-271)

               10        20        30        40        50        60
pF1KB8 MAAVSVYAPPVGGFSFDNCRRNAVLEADFAKRGYKLPKVRKTGTTIAGVVYKDGIVLGAD
                : :::::.::.::: ::  .   : :.:..:::::::::.:..::..::::
NP_002   MLKPALEPRGGFSFENCQRNASLERVLP--GLKVPHARKTGTTIAGLVFQDGVILGAD
                 10        20          30        40        50      

               70        80        90       100       110       120
pF1KB8 TRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVV
       ::::.  :::::.: :::::.:.:::::::.:::..:::....:..:::.::::: :::.
NP_002 TRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVA
         60        70        80        90       100       110      

              130       140       150       160       170       180
pF1KB8 TANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAV
       :..:.:.: ::::::..::.:..::::.:::.::...:::: ..::....:::. ::.::
NP_002 TVTRILRQTLFRYQGHVGASLIVGGVDLTGPQLYGVHPHGSYSRLPFTALGSGQDAALAV
        120       130       140       150       160       170      

              190       200       210       220       230       240
pF1KB8 FEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGT
       .::.:.:.:  : :..:. ::..:::..:::::.:.: :::.:.   .::  . :..   
NP_002 LEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSGGNVDACVITKTGAKLLRTLSSPTEPVK
        180       190       200       210       220       230      

              250       260       270       
pF1KB8 RLGRYRCEKGTTAVLTEKITPLEIEVLEETVQTMDTS
       : :::.   :::::::. . :: .:..:::::.:.  
NP_002 RSGRYHFVPGTTAVLTQTVKPLTLELVEETVQAMEVE
        240       250       260       270   

>>NP_002789 (OMIM: 600307) proteasome subunit beta type-  (239 aa)
 initn: 336 init1: 259 opt: 342  Z-score: 432.4  bits: 87.6 E(85289): 2.4e-17
Smith-Waterman score: 342; 32.1% identity (65.2% similar) in 187 aa overlap (42-227:33-219)

              20        30        40        50        60        70 
pF1KB8 GGFSFDNCRRNAVLEADFAKRGYKLPKVRKTGTTIAGVVYKDGIVLGADTRATEGMVVAD
                                     ::::: .: .  :.:::::.:.: :  .:.
NP_002 ATLLAARGAGPAPAWGPEAFTPDWESREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIAN
             10        20        30        40        50        60  

              80        90       100       110       120       130 
pF1KB8 KNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLF
       .  .:.  :   :.:: .:.::::. ... .. .: .::.  .. : : ::  ..:.: .
NP_002 RVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCY
             70        80        90       100       110       120  

             140        150       160       170       180       190
pF1KB8 RYQGYIGAALVLGGVDVT-GPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDME
       ::.  . :.....: :   : ..::.   :   .  ..  ::::   ..  .  .:  : 
NP_002 RYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMT
            130       140       150       160       170       180  

              200       210       220       230       240       250
pF1KB8 EEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGTRLGRYRCEKG
       .::  .....:.: ..  : .::. : : .:... ..                       
NP_002 KEECLQFTANALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIPKFAVATLPPA   
            190       200       210       220       230            

              260       270       
pF1KB8 TTAVLTEKITPLEIEVLEETVQTMDTS

>>NP_002791 (OMIM: 177045) proteasome subunit beta type-  (219 aa)
 initn: 326 init1: 302 opt: 316  Z-score: 400.7  bits: 81.6 E(85289): 1.4e-15
Smith-Waterman score: 316; 29.2% identity (64.6% similar) in 195 aa overlap (36-227:11-204)

          10        20        30        40          50        60   
pF1KB8 VYAPPVGGFSFDNCRRNAVLEADFAKRGYKLPKVRK--TGTTIAGVVYKDGIVLGADTRA
                                     ::.. .  ::::: .: .  :.:.:.:.:.
NP_002                     MLRAGAPTGDLPRAGEVHTGTTIMAVEFDGGVVMGSDSRV
                                   10        20        30        40

            70        80        90       100       110       120   
pF1KB8 TEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTAN
       . : .:...  .:.  .   :::  .:.:::.. .... . .::::..   . : :..: 
NP_002 SAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMAAYQLELHGIELEEPPLVLAAA
               50        60        70        80        90       100

           130       140        150       160       170       180  
pF1KB8 RMLKQMLFRYQGYIGAALVLGGVDVT-GPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFE
        ..... ..:.  ..: :...: :   : ..:.    :   . :..  ::::   ..  .
NP_002 NVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTLG-GMLTRQPFAIGGSGSTFIYGYVD
              110       120       130        140       150         

            190       200       210       220       230       240  
pF1KB8 DKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGTRL
         ..: :  :: . ....::: ..  : .::. : : .:.   .:               
NP_002 AAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTITAAGVDHRVILGNELPKFYDE
     160       170       180       190       200       210         

            250       260       270       
pF1KB8 GRYRCEKGTTAVLTEKITPLEIEVLEETVQTMDTS

>>NP_001093250 (OMIM: 611137) proteasome subunit beta ty  (300 aa)
 initn: 312 init1: 166 opt: 314  Z-score: 396.1  bits: 81.2 E(85289): 2.5e-15
Smith-Waterman score: 314; 29.6% identity (59.3% similar) in 216 aa overlap (5-218:18-225)

                            10         20        30        40      
pF1KB8              MAAVSVYAPPVGGFSFD-NCRRNAVLEADFAKRGYKLPKVRKTGTTI
                        : . : .::..   .:  .. :.     .: .: .    ::: 
NP_001 MALQDVCKWQSPDTQGPSPHLPRAGGWAVPRGCDPQTFLQI----HGPRLAH----GTTT
               10        20        30        40                50  

         50        60        70        80        90       100      
pF1KB8 AGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNL
        .  .. :.. .::::.. :  ::     :.  .  ..    .::.::     .... .:
NP_001 LAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQHLLGTTSGTSADCATWYRVLQREL
             60        70        80        90       100       110  

        110       120       130        140       150       160     
pF1KB8 ELHSLSTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKL
       .:. :  :.:: :..: ..:. :. .:.:  . .: .: : : .::.:. .:  :.  . 
NP_001 RLRELREGQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPELFYVYSDGTRLQG
            120       130       140       150       160       170  

         170       180       190       200       210       220     
pF1KB8 PYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNK
          ..::::  :..:..  .: ::  .::  :.  :.: .   :  ::...::       
NP_001 DIFSVGSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESG
            180       190       200       210       220       230  

         230       240       250       260       270               
pF1KB8 LDFLRPYTVPNKKGTRLGRYRCEKGTTAVLTEKITPLEIEVLEETVQTMDTS        
                                                                   
NP_001 WEHVSRSDACVLYVELQKLLEPEPEEDASHAHPEPATAHRAAEDRELSVGPGEVTPGDSR
            240       250       260       270       280       290  

>>NP_001257410 (OMIM: 600307) proteasome subunit beta ty  (213 aa)
 initn: 284 init1: 240 opt: 309  Z-score: 392.2  bits: 80.0 E(85289): 4.2e-15
Smith-Waterman score: 309; 32.9% identity (64.6% similar) in 161 aa overlap (42-201:33-193)

              20        30        40        50        60        70 
pF1KB8 GGFSFDNCRRNAVLEADFAKRGYKLPKVRKTGTTIAGVVYKDGIVLGADTRATEGMVVAD
                                     ::::: .: .  :.:::::.:.: :  .:.
NP_001 ATLLAARGAGPAPAWGPEAFTPDWESREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIAN
             10        20        30        40        50        60  

              80        90       100       110       120       130 
pF1KB8 KNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLF
       .  .:.  :   :.:: .:.::::. ... .. .: .::.  .. : : ::  ..:.: .
NP_001 RVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCY
             70        80        90       100       110       120  

             140        150       160       170       180       190
pF1KB8 RYQGYIGAALVLGGVDVT-GPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDME
       ::.  . :.....: :   : ..::.   :   .  ..  ::::   ..  .  .:  : 
NP_001 RYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMT
            130       140       150       160       170       180  

              200       210       220       230       240       250
pF1KB8 EEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGTRLGRYRCEKG
       .::  .....:                                                 
NP_001 KEECLQFTANAFFFYPQLSLWPWSGMAPVEE                             
            190       200       210                                

>>NP_002788 (OMIM: 600306) proteasome subunit beta type-  (263 aa)
 initn: 232 init1: 125 opt: 294  Z-score: 372.1  bits: 76.6 E(85289): 5.5e-14
Smith-Waterman score: 294; 28.8% identity (65.5% similar) in 177 aa overlap (43-218:59-235)

             20        30        40        50        60        70  
pF1KB8 GFSFDNCRRNAVLEADFAKRGYKLPKVRKTGTTIAGVVYKDGIVLGADTRATEGMVVADK
                                     :::  .  .. :....::.::: :  .:..
NP_002 DLGPGSLSDGLSLAAPGWGVPEEPGIEMLHGTTTLAFKFRHGVIVAADSRATAGAYIASQ
       30        40        50        60        70        80        

             80        90       100       110       120       130  
pF1KB8 NCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFR
       . .:.  :.: .    :: ::: ..  .:.. . ... : . .   :..:...: .:...
NP_002 TVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQ
       90       100       110       120       130       140        

             140       150       160       170       180       190 
pF1KB8 YQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEE
       :.:. .. . .. : :  :: :: .  .:.  .    ..::::. :..:..  .  :.: 
NP_002 YKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEV
      150       160       170       180       190       200        

             200       210       220       230       240       250 
pF1KB8 EEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGTRLGRYRCEKGT
       :.: .:. .::  . . :  ::. ..:                                 
NP_002 EQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSTP     
      210       220       230       240       250       260        

>>NP_004150 (OMIM: 177046,256040) proteasome subunit bet  (272 aa)
 initn: 240 init1: 137 opt: 284  Z-score: 359.4  bits: 74.3 E(85289): 2.8e-13
Smith-Waterman score: 284; 28.7% identity (63.5% similar) in 178 aa overlap (43-218:68-244)

             20        30        40        50        60        70  
pF1KB8 GFSFDNCRRNAVLEADFAKRGYKLPKVRKTGTTIAGVVYKDGIVLGADTRATEGMVVADK
                                     :::  .  .. :.. ..:.::. :  ..  
NP_004 SSGCPGLEPTEFFQSLGGDGERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISAL
        40        50        60        70        80        90       

             80        90       100       110       120       130  
pF1KB8 NCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFR
         .:.  :.: .    .: ::: ..  .:.... .:. : .:.   : .:...:..:. .
NP_004 RVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQ
       100       110       120       130       140       150       

            140         150       160       170       180       190
pF1KB8 YQGYIGAAL--VLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDME
       :.: .: ..  .. : :  :: :: .  ::.  .  . . :::.  :..:... .::.. 
NP_004 YRG-MGLSMGSMICGWDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLS
       160        170       180       190       200       210      

              200       210       220       230       240       250
pF1KB8 EEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGTRLGRYRCEKG
        ::: .:  .::: .   :  ::. ...                                
NP_004 PEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREANQ    
        220       230       240       250       260       270      

>>NP_683720 (OMIM: 177046,256040) proteasome subunit bet  (276 aa)
 initn: 217 init1: 137 opt: 284  Z-score: 359.3  bits: 74.3 E(85289): 2.8e-13
Smith-Waterman score: 284; 28.7% identity (63.5% similar) in 178 aa overlap (43-218:72-248)

             20        30        40        50        60        70  
pF1KB8 GFSFDNCRRNAVLEADFAKRGYKLPKVRKTGTTIAGVVYKDGIVLGADTRATEGMVVADK
                                     :::  .  .. :.. ..:.::. :  ..  
NP_683 LALPRGMQPTEFFQSLGGDGERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISAL
              50        60        70        80        90       100 

             80        90       100       110       120       130  
pF1KB8 NCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFR
         .:.  :.: .    .: ::: ..  .:.... .:. : .:.   : .:...:..:. .
NP_683 RVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQ
             110       120       130       140       150       160 

            140         150       160       170       180       190
pF1KB8 YQGYIGAAL--VLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDME
       :.: .: ..  .. : :  :: :: .  ::.  .  . . :::.  :..:... .::.. 
NP_683 YRG-MGLSMGSMICGWDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLS
              170       180       190       200       210       220

              200       210       220       230       240       250
pF1KB8 EEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGTRLGRYRCEKG
        ::: .:  .::: .   :  ::. ...                                
NP_683 PEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREANQ    
              230       240       250       260       270          

>>NP_001124197 (OMIM: 600306) proteasome subunit beta ty  (160 aa)
 initn: 140 init1: 125 opt: 202  Z-score: 261.1  bits: 55.3 E(85289): 8.4e-08
Smith-Waterman score: 202; 28.2% identity (65.6% similar) in 131 aa overlap (89-218:2-132)

       60        70        80        90       100       110        
pF1KB8 ADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPR
                                     :: ::: ..  .:.. . ... : . .   
NP_001                              MAGGAADCSFWERLLARQCRIYELRNKERIS
                                            10        20        30 

      120       130        140       150       160       170       
pF1KB8 VVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAA
       :..:...: .:...:.:. .. . .. : :  :: :: .  .:.  .    ..::::. :
NP_001 VAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYA
              40        50        60        70        80        90 

       180       190       200       210       220       230       
pF1KB8 MAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNK
       ..:..  .  :.: :.: .:. .::  . . :  ::. ..:                   
NP_001 YGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADL
             100       110       120       130       140       150 

       240       250       260       270       
pF1KB8 KGTRLGRYRCEKGTTAVLTEKITPLEIEVLEETVQTMDTS
                                               
NP_001 HEKYSGSTP                               
             160                               




277 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 11:17:21 2016 done: Fri Nov  4 11:17:22 2016
 Total Scan time:  5.920 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
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