Result of FASTA (omim) for pF1KB8255
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8255, 317 aa
  1>>>pF1KB8255 317 - 317 aa - 317 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.5010+/-0.000497; mu= 9.4942+/- 0.030
 mean_var=185.8908+/-40.106, 0's: 0 Z-trim(112.5): 452  B-trim: 188 in 2/47
 Lambda= 0.094069
 statistics sampled from 20795 (21390) to 20795 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.615), E-opt: 0.2 (0.251), width:  16
 Scan time:  5.680

The best scores are:                                      opt bits E(85289)
NP_006089 (OMIM: 176981) receptor of activated pro ( 317) 2171 307.7   2e-83
NP_001186706 (OMIM: 614784,615973) POC1 centriolar ( 436)  416 69.7 1.2e-11
NP_002066 (OMIM: 139130,145500,617024) guanine nuc ( 340)  405 68.1 2.9e-11
XP_011519255 (OMIM: 139130,145500,617024) PREDICTE ( 360)  405 68.1 3.1e-11
XP_016861593 (OMIM: 614783,614813) PREDICTED: POC1 ( 321)  392 66.3 9.7e-11
NP_001155053 (OMIM: 614783,614813) POC1 centriolar ( 369)  392 66.4 1.1e-10
XP_016880191 (OMIM: 601545,607432) PREDICTED: plat ( 345)  388 65.8 1.5e-10
XP_016880188 (OMIM: 601545,607432) PREDICTED: plat ( 410)  388 65.9 1.6e-10
XP_016880189 (OMIM: 601545,607432) PREDICTED: plat ( 410)  388 65.9 1.6e-10
NP_000421 (OMIM: 601545,607432) platelet-activatin ( 410)  388 65.9 1.6e-10
XP_016880190 (OMIM: 601545,607432) PREDICTED: plat ( 410)  388 65.9 1.6e-10
XP_011522205 (OMIM: 601545,607432) PREDICTED: plat ( 428)  388 65.9 1.7e-10
XP_011522204 (OMIM: 601545,607432) PREDICTED: plat ( 428)  388 65.9 1.7e-10
XP_011522203 (OMIM: 601545,607432) PREDICTED: plat ( 428)  388 65.9 1.7e-10
NP_438172 (OMIM: 609012) WD repeat-containing prot ( 334)  364 62.5 1.4e-09
XP_005272220 (OMIM: 609012) PREDICTED: WD repeat-c ( 334)  364 62.5 1.4e-09
NP_060058 (OMIM: 609012) WD repeat-containing prot ( 334)  364 62.5 1.4e-09
XP_016856550 (OMIM: 139380,613065,616973) PREDICTE ( 340)  363 62.4 1.5e-09
XP_016856549 (OMIM: 139380,613065,616973) PREDICTE ( 340)  363 62.4 1.5e-09
XP_016856548 (OMIM: 139380,613065,616973) PREDICTE ( 340)  363 62.4 1.5e-09
NP_002065 (OMIM: 139380,613065,616973) guanine nuc ( 340)  363 62.4 1.5e-09
NP_001269468 (OMIM: 139380,613065,616973) guanine  ( 340)  363 62.4 1.5e-09
NP_001151 (OMIM: 602233) apoptotic protease-activa (1194)  371 64.2 1.6e-09
NP_863658 (OMIM: 602233) apoptotic protease-activa (1205)  371 64.2 1.6e-09
XP_006713784 (OMIM: 610863,615185) PREDICTED: guan ( 340)  344 59.8 9.2e-09
XP_005247749 (OMIM: 610863,615185) PREDICTED: guan ( 340)  344 59.8 9.2e-09
NP_067642 (OMIM: 610863,615185) guanine nucleotide ( 340)  344 59.8 9.2e-09
NP_758440 (OMIM: 614784,615973) POC1 centriolar pr ( 478)  330 58.1 4.2e-08
XP_011531864 (OMIM: 614783,614813) PREDICTED: POC1 ( 300)  323 56.9 6.1e-08
XP_011531863 (OMIM: 614783,614813) PREDICTED: POC1 ( 326)  323 56.9 6.4e-08
NP_001155052 (OMIM: 614783,614813) POC1 centriolar ( 359)  323 57.0 6.8e-08
XP_011531862 (OMIM: 614783,614813) PREDICTED: POC1 ( 374)  323 57.0   7e-08
NP_056241 (OMIM: 614783,614813) POC1 centriolar pr ( 407)  323 57.1 7.4e-08
NP_037361 (OMIM: 602233) apoptotic protease-activa (1237)  330 58.6 7.5e-08
NP_863651 (OMIM: 602233) apoptotic protease-activa (1248)  330 58.6 7.6e-08
XP_011531866 (OMIM: 614783,614813) PREDICTED: POC1 ( 246)  318 56.1 8.7e-08
XP_011531867 (OMIM: 614783,614813) PREDICTED: POC1 ( 246)  318 56.1 8.7e-08
XP_011531865 (OMIM: 614783,614813) PREDICTED: POC1 ( 246)  318 56.1 8.7e-08
NP_001309196 (OMIM: 607795,615922) U4/U6 small nuc ( 279)  315 55.8 1.2e-07
NP_001309195 (OMIM: 607795,615922) U4/U6 small nuc ( 279)  315 55.8 1.2e-07
NP_001231855 (OMIM: 607795,615922) U4/U6 small nuc ( 521)  315 56.1 1.8e-07
NP_004688 (OMIM: 607795,615922) U4/U6 small nuclea ( 522)  315 56.1 1.8e-07
XP_016860390 (OMIM: 612173) PREDICTED: sperm-assoc ( 323)  308 54.9 2.6e-07
XP_011510137 (OMIM: 612173) PREDICTED: sperm-assoc ( 323)  308 54.9 2.6e-07
XP_016860391 (OMIM: 612173) PREDICTED: sperm-assoc ( 323)  308 54.9 2.6e-07
XP_016860389 (OMIM: 612173) PREDICTED: sperm-assoc ( 323)  308 54.9 2.6e-07
XP_016860387 (OMIM: 612173) PREDICTED: sperm-assoc ( 390)  308 55.0 2.9e-07
XP_016860385 (OMIM: 612173) PREDICTED: sperm-assoc ( 512)  308 55.1 3.5e-07
XP_016860386 (OMIM: 612173) PREDICTED: sperm-assoc ( 512)  308 55.1 3.5e-07
XP_011510124 (OMIM: 612173) PREDICTED: sperm-assoc ( 528)  308 55.2 3.5e-07


>>NP_006089 (OMIM: 176981) receptor of activated protein  (317 aa)
 initn: 2171 init1: 2171 opt: 2171  Z-score: 1618.7  bits: 307.7 E(85289): 2e-83
Smith-Waterman score: 2171; 100.0% identity (100.0% similar) in 317 aa overlap (1-317:1-317)

               10        20        30        40        50        60
pF1KB8 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 FSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 FSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA
              250       260       270       280       290       300

              310       
pF1KB8 GYTDNLVRVWQVTIGTR
       :::::::::::::::::
NP_006 GYTDNLVRVWQVTIGTR
              310       

>>NP_001186706 (OMIM: 614784,615973) POC1 centriolar pro  (436 aa)
 initn: 564 init1: 159 opt: 416  Z-score: 330.0  bits: 69.7 E(85289): 1.2e-11
Smith-Waterman score: 426; 31.0% identity (60.4% similar) in 268 aa overlap (51-311:4-256)

               30        40        50        60          70        
pF1KB8 IATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR--GHSHFVSDVVISSDGQFA
                                     :.    :: :  ::.  :..: .:  :.. 
NP_001                            MLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLL
                                          10        20        30   

       80        90       100       110       120       130        
pF1KB8 LSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC
        :.: : :.:::         .: .::  : :: ::.:.. ....:.::.::.: ..   
NP_001 ASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW-SMYRQ
            40        50        60        70        80         90  

      140       150       160       170       180       190        
pF1KB8 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV
       ..  .   :..:: :..:::..   .::::. :: .:.:. .: .  .:    .:. : :
NP_001 RFLYSLYRHTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV
            100       110         120       130       140       150

      200       210       220          230       240        250    
pF1KB8 TVSPDGSLCASGGKDGQAMLWDLNEGK---HLYTLDGGDIINALCFSPN-RYWLCAATGP
         .:.:.  ::.:.:  . .::.  .:   :  . .::  .: . : :.  : . :..  
NP_001 DFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG--VNCISFHPSGNYLITASSDG
              160       170       180         190       200        

          260        270       280       290       300       310   
pF1KB8 SIKIWDL-EGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT
       ..:: :: ::..:         . .... :    ....:  :. . .: .:. : .:.  
NP_001 TLKILDLLEGRLIY--------TLQGHTGP--VFTVSFSKGGELFASGGADTQVLLWRTN
      210       220               230         240       250        

                                                                   
pF1KB8 IGTR                                                        
                                                                   
NP_001 FDELHCKGLTKRNLKRLHFDSPPHLLDIYPRTPHPHEEKVETVEINPKLEVIDLQISTPP
      260       270       280       290       300       310        

>>NP_002066 (OMIM: 139130,145500,617024) guanine nucleot  (340 aa)
 initn: 333 init1: 221 opt: 405  Z-score: 323.1  bits: 68.1 E(85289): 2.9e-11
Smith-Waterman score: 405; 31.5% identity (60.0% similar) in 260 aa overlap (56-310:48-297)

          30        40        50        60        70        80     
pF1KB8 QFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG
                                     .:.::::   .  .  ..:... .:.: ::
NP_002 IADARKACADVTLAELVSGLEVVGRVQMRTRRTLRGHLAKIYAMHWATDSKLLVSASQDG
        20        30        40        50        60        70       

          90       100       110       120       130          140  
pF1KB8 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL---GVCKYTV
        : .::  : . .. .  ... :.. :.. ..  .. :. :.  ...:     :  : . 
NP_002 KLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSR
        80        90       100       110       120       130       

            150       160       170       180       190       200  
pF1KB8 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP
       .  .:. ..:: ::  .  : :..: : :    .:.. . . ::  .::::   ...:::
NP_002 ELSAHTGYLSCCRFLDD--NNIVTSSG-DTTCALWDIETGQQKTVFVGHTGDCMSLAVSP
       140       150         160        170       180       190    

            210       220       230        240       250        260
pF1KB8 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFSPNRYWLCAATGP-SIKIWD
       : .:  ::. :..: :::. ::    :. : .  :::.:: ::   .:...   : ...:
NP_002 DFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFD
          200       210       220       230       240       250    

              270       280       290       300       310          
pF1KB8 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR   
       :..        ::.:  : ..     ::.:.: .:. ::::: :    ::          
NP_002 LRA-------DQELICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKSERVGI
                 260       270       280       290       300       

NP_002 LSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN
       310       320       330       340

>>XP_011519255 (OMIM: 139130,145500,617024) PREDICTED: g  (360 aa)
 initn: 333 init1: 221 opt: 405  Z-score: 322.8  bits: 68.1 E(85289): 3.1e-11
Smith-Waterman score: 405; 31.5% identity (60.0% similar) in 260 aa overlap (56-310:48-297)

          30        40        50        60        70        80     
pF1KB8 QFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG
                                     .:.::::   .  .  ..:... .:.: ::
XP_011 IADARKACADVTLAELVSGLEVVGRVQMRTRRTLRGHLAKIYAMHWATDSKLLVSASQDG
        20        30        40        50        60        70       

          90       100       110       120       130          140  
pF1KB8 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL---GVCKYTV
        : .::  : . .. .  ... :.. :.. ..  .. :. :.  ...:     :  : . 
XP_011 KLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSR
        80        90       100       110       120       130       

            150       160       170       180       190       200  
pF1KB8 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP
       .  .:. ..:: ::  .  : :..: : :    .:.. . . ::  .::::   ...:::
XP_011 ELSAHTGYLSCCRFLDD--NNIVTSSG-DTTCALWDIETGQQKTVFVGHTGDCMSLAVSP
       140       150         160        170       180       190    

            210       220       230        240       250        260
pF1KB8 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFSPNRYWLCAATGP-SIKIWD
       : .:  ::. :..: :::. ::    :. : .  :::.:: ::   .:...   : ...:
XP_011 DFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFD
          200       210       220       230       240       250    

              270       280       290       300       310          
pF1KB8 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR   
       :..        ::.:  : ..     ::.:.: .:. ::::: :    ::          
XP_011 LRA-------DQELICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKSERVGK
                 260       270       280       290       300       

XP_011 GQPWLLLPQLEGPSPALPPHSVPPISSHFGLSYCCPLSLGDSTPGIQYPLVPN
       310       320       330       340       350       360

>>XP_016861593 (OMIM: 614783,614813) PREDICTED: POC1 cen  (321 aa)
 initn: 465 init1: 173 opt: 392  Z-score: 313.8  bits: 66.3 E(85289): 9.7e-11
Smith-Waterman score: 418; 31.6% identity (59.2% similar) in 282 aa overlap (37-311:2-261)

         10        20        30        40        50         60     
pF1KB8 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQ-RALR--GHS
                                     :. ...:..         :: :: :  ::.
XP_016                              MDSCLMVWHMK--------PQSRAYRFTGHK
                                            10                20   

            70        80        90       100       110       120   
pF1KB8 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSG
         :. : .: .:..  ::: : :.:.:  ..   .  : .::  : :: : ::....:..
XP_016 DAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTA
            30        40        50        60        70        80   

           130       140       150       160       170       180   
pF1KB8 SRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK
       : :::.:.: :    :.  .  .: .:: :..:::..   .::: . :: ::.:. .. .
XP_016 SDDKTVKVWAT-HRQKFLFSLSQHINWVRCAKFSPDGR--LIVSASDDKTVKLWDKSSRE
            90        100       110       120         130       140

           190       200       210       220         230       240 
pF1KB8 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL--YTLDGGDIINALCF
          ..  : :... :   :.:.  :..: :. . .::.   . :  : : ..  .:.: :
XP_016 CVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSA-AVNGLSF
              150       160       170       180       190          

              250       260        270       280       290         
pF1KB8 SPN-RYWLCAATGPSIKIWDL-EGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF
        :.  : . :..  ..:: :: ::...          :    . :  :..:.:  :. . 
XP_016 HPSGNYLITASSDSTLKILDLMEGRLLY---------TLHGHQGPA-TTVAFSRTGEYFA
     200       210       220                230        240         

     300       310                                                 
pF1KB8 AGYTDNLVRVWQVTIGTR                                          
       .: .:. : ::.                                                
XP_016 SGGSDEQVMVWKSNFDIVDHGEVTKVPRPPATLASSMGNLTVSILEQRLTLTEDKLKQCL
     250       260       270       280       290       300         

>>NP_001155053 (OMIM: 614783,614813) POC1 centriolar pro  (369 aa)
 initn: 465 init1: 173 opt: 392  Z-score: 313.1  bits: 66.4 E(85289): 1.1e-10
Smith-Waterman score: 418; 31.6% identity (59.2% similar) in 282 aa overlap (37-311:2-261)

         10        20        30        40        50         60     
pF1KB8 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQ-RALR--GHS
                                     :. ...:..         :: :: :  ::.
NP_001                              MDSCLMVWHMK--------PQSRAYRFTGHK
                                            10                20   

            70        80        90       100       110       120   
pF1KB8 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSG
         :. : .: .:..  ::: : :.:.:  ..   .  : .::  : :: : ::....:..
NP_001 DAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTA
            30        40        50        60        70        80   

           130       140       150       160       170       180   
pF1KB8 SRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK
       : :::.:.: :    :.  .  .: .:: :..:::..   .::: . :: ::.:. .. .
NP_001 SDDKTVKVWAT-HRQKFLFSLSQHINWVRCAKFSPDGR--LIVSASDDKTVKLWDKSSRE
            90        100       110       120         130       140

           190       200       210       220         230       240 
pF1KB8 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL--YTLDGGDIINALCF
          ..  : :... :   :.:.  :..: :. . .::.   . :  : : ..  .:.: :
NP_001 CVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSA-AVNGLSF
              150       160       170       180       190          

              250       260        270       280       290         
pF1KB8 SPN-RYWLCAATGPSIKIWDL-EGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF
        :.  : . :..  ..:: :: ::...          :    . :  :..:.:  :. . 
NP_001 HPSGNYLITASSDSTLKILDLMEGRLLY---------TLHGHQGPA-TTVAFSRTGEYFA
     200       210       220                230        240         

     300       310                                                 
pF1KB8 AGYTDNLVRVWQVTIGTR                                          
       .: .:. : ::.                                                
NP_001 SGGSDEQVMVWKSNFDIVDHGEVTKVPRPPATLASSMGNLPEVDFPVPPGRGRSVESVQS
     250       260       270       280       290       300         

>>XP_016880191 (OMIM: 601545,607432) PREDICTED: platelet  (345 aa)
 initn: 557 init1: 203 opt: 388  Z-score: 310.5  bits: 65.8 E(85289): 1.5e-10
Smith-Waterman score: 461; 31.2% identity (56.8% similar) in 324 aa overlap (11-311:39-343)

                                   10        20        30        40
pF1KB8                     MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTI
                                     :.:: . ::..   : :  :. :::.: ::
XP_016 EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMV-SASEDATI
       10        20        30        40        50         60       

               50        60        70        80        90       100
pF1KB8 IMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR
        .:     ::  :  .:.:.::.  :.:. .. .:..  : : : :..:::.      : 
XP_016 KVWDY---ET--GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT
        70             80        90       100       110       120  

              110       120       130        140       150         
pF1KB8 FVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPN
       . :: ..: :::.  .. .:::.:::::::.:..  : :  :    .: :::  ::  ::
XP_016 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT--GHREWVRMVR--PN
            130       140       150       160         170          

     160       170       180       190       200                   
pF1KB8 SSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCA-----------
       ... .:.::. :. :.:: .:. . :..   :   .. .. .:..:  .           
XP_016 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK
      180       190       200       210       220       230        

               210       220       230         240       250       
pF1KB8 ---------SGGKDGQAMLWDLNEGKHLYTLDGGD--IINALCFSPNRYWLCAATGPSIK
                ::..:    .::.. :  :.:: : :  . ..:  : ... :  :   ...
XP_016 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR
      240       250       260       270       280       290        

       260       270       280       290       300       310       
pF1KB8 IWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR
       .:: ..:  .  :.         :.    ::: .   .  . .: .:. :.::.      
XP_016 VWDYKNKRCMKTLN---------AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR    
      300       310                320       330       340         

>>XP_016880188 (OMIM: 601545,607432) PREDICTED: platelet  (410 aa)
 initn: 557 init1: 203 opt: 388  Z-score: 309.7  bits: 65.9 E(85289): 1.6e-10
Smith-Waterman score: 461; 31.2% identity (56.8% similar) in 324 aa overlap (11-311:104-408)

                                   10        20        30        40
pF1KB8                     MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTI
                                     :.:: . ::..   : :  :. :::.: ::
XP_016 EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMV-SASEDATI
            80        90       100       110       120        130  

               50        60        70        80        90       100
pF1KB8 IMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR
        .:     ::  :  .:.:.::.  :.:. .. .:..  : : : :..:::.      : 
XP_016 KVWDY---ET--GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT
                 140       150       160       170       180       

              110       120       130        140       150         
pF1KB8 FVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPN
       . :: ..: :::.  .. .:::.:::::::.:..  : :  :    .: :::  ::  ::
XP_016 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT--GHREWVRMVR--PN
       190       200       210       220       230         240     

     160       170       180       190       200                   
pF1KB8 SSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCA-----------
       ... .:.::. :. :.:: .:. . :..   :   .. .. .:..:  .           
XP_016 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK
           250       260       270       280       290       300   

               210       220       230         240       250       
pF1KB8 ---------SGGKDGQAMLWDLNEGKHLYTLDGGD--IINALCFSPNRYWLCAATGPSIK
                ::..:    .::.. :  :.:: : :  . ..:  : ... :  :   ...
XP_016 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR
           310       320       330       340       350       360   

       260       270       280       290       300       310       
pF1KB8 IWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR
       .:: ..:  .  :.         :.    ::: .   .  . .: .:. :.::.      
XP_016 VWDYKNKRCMKTLN---------AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR    
           370                380       390       400       410    

>>XP_016880189 (OMIM: 601545,607432) PREDICTED: platelet  (410 aa)
 initn: 557 init1: 203 opt: 388  Z-score: 309.7  bits: 65.9 E(85289): 1.6e-10
Smith-Waterman score: 461; 31.2% identity (56.8% similar) in 324 aa overlap (11-311:104-408)

                                   10        20        30        40
pF1KB8                     MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTI
                                     :.:: . ::..   : :  :. :::.: ::
XP_016 EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMV-SASEDATI
            80        90       100       110       120        130  

               50        60        70        80        90       100
pF1KB8 IMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR
        .:     ::  :  .:.:.::.  :.:. .. .:..  : : : :..:::.      : 
XP_016 KVWDY---ET--GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT
                 140       150       160       170       180       

              110       120       130        140       150         
pF1KB8 FVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPN
       . :: ..: :::.  .. .:::.:::::::.:..  : :  :    .: :::  ::  ::
XP_016 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT--GHREWVRMVR--PN
       190       200       210       220       230         240     

     160       170       180       190       200                   
pF1KB8 SSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCA-----------
       ... .:.::. :. :.:: .:. . :..   :   .. .. .:..:  .           
XP_016 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK
           250       260       270       280       290       300   

               210       220       230         240       250       
pF1KB8 ---------SGGKDGQAMLWDLNEGKHLYTLDGGD--IINALCFSPNRYWLCAATGPSIK
                ::..:    .::.. :  :.:: : :  . ..:  : ... :  :   ...
XP_016 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR
           310       320       330       340       350       360   

       260       270       280       290       300       310       
pF1KB8 IWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR
       .:: ..:  .  :.         :.    ::: .   .  . .: .:. :.::.      
XP_016 VWDYKNKRCMKTLN---------AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR    
           370                380       390       400       410    

>>NP_000421 (OMIM: 601545,607432) platelet-activating fa  (410 aa)
 initn: 557 init1: 203 opt: 388  Z-score: 309.7  bits: 65.9 E(85289): 1.6e-10
Smith-Waterman score: 461; 31.2% identity (56.8% similar) in 324 aa overlap (11-311:104-408)

                                   10        20        30        40
pF1KB8                     MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTI
                                     :.:: . ::..   : :  :. :::.: ::
NP_000 EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMV-SASEDATI
            80        90       100       110       120        130  

               50        60        70        80        90       100
pF1KB8 IMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR
        .:     ::  :  .:.:.::.  :.:. .. .:..  : : : :..:::.      : 
NP_000 KVWDY---ET--GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT
                 140       150       160       170       180       

              110       120       130        140       150         
pF1KB8 FVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPN
       . :: ..: :::.  .. .:::.:::::::.:..  : :  :    .: :::  ::  ::
NP_000 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT--GHREWVRMVR--PN
       190       200       210       220       230         240     

     160       170       180       190       200                   
pF1KB8 SSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCA-----------
       ... .:.::. :. :.:: .:. . :..   :   .. .. .:..:  .           
NP_000 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK
           250       260       270       280       290       300   

               210       220       230         240       250       
pF1KB8 ---------SGGKDGQAMLWDLNEGKHLYTLDGGD--IINALCFSPNRYWLCAATGPSIK
                ::..:    .::.. :  :.:: : :  . ..:  : ... :  :   ...
NP_000 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR
           310       320       330       340       350       360   

       260       270       280       290       300       310       
pF1KB8 IWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR
       .:: ..:  .  :.         :.    ::: .   .  . .: .:. :.::.      
NP_000 VWDYKNKRCMKTLN---------AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR    
           370                380       390       400       410    




317 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 11:04:14 2016 done: Fri Nov  4 11:04:15 2016
 Total Scan time:  5.680 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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