GENSCAN 1.0	Date run:  4-Nov-116	Time: 11:04:01

Sequence gi568815591f:6287211_6502443 : 215233 bp : 47.59% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +    269    308   40                              -2.46
 1.01 Init +    393    525  133  2  1   78   47    57 0.418   0.90
 1.02 Intr +   3221   3405  185  0  2  112   78    -4 0.041   0.51
 1.03 Intr +  27215  27275   61  1  1  113  103    16 0.417   3.91
 1.04 Intr +  30511  30668  158  2  2   47   56    92 0.351   1.63
 1.05 Term +  33715  33750   36  0  0   74   49    36 0.137  -4.36
 1.06 PlyA +  34435  34440    6                               1.05

 2.02 PlyA -  34469  34464    6                               1.05
 2.01 Sngl -  43944  43165  780  0  0   75   45   162 0.608   4.69
 2.00 Prom -  49170  49131   40                              -3.76

 3.04 PlyA -  49769  49764    6                               1.05
 3.03 Term -  51468  51367  102  0  0   66   43   102 0.969   1.78
 3.02 Intr -  51849  51785   65  1  2  105   79    38 0.931   3.04
 3.01 Init -  61548  61359  190  0  1   43   80   509 0.878  42.77
 3.00 Prom -  62012  61973   40                              -8.86

 4.00 Prom +  63367  63406   40                              -3.36
 4.01 Init +  87126  87296  171  2  0  115   76    56 0.967   5.31
 4.02 Intr +  87487  87560   74  0  2   59  100    95 0.813   6.00
 4.03 Intr +  97128  97241  114  0  0   98   82    35 0.911   3.46
 4.04 Intr + 100002 100073   72  0  0  120   75    32 0.917   3.62
 4.05 Intr + 104714 104831  118  2  1   84   70    73 0.982   5.57
 4.06 Intr + 112916 112978   63  1  0  114  100   -26 0.504   0.11
 4.07 Term + 114658 115236  579  0  0   70   36   275 0.586  14.99
 4.08 PlyA + 115293 115298    6                              -0.45

 5.03 PlyA - 115397 115392    6                              -0.45
 5.02 Term - 115906 115800  107  2  2   61   49    93 0.651   1.27
 5.01 Init - 120417 120060  358  0  1   33   29   254 0.669  11.27
 5.00 Prom - 121334 121295   40                              -7.86

 6.23 PlyA - 121939 121934    6                               1.05
 6.22 Term - 122825 122627  199  1  1   94   47   224 0.887  15.77
 6.21 Intr - 123170 122920  251  2  2   55  101   232 0.957  17.44
 6.20 Intr - 125673 125601   73  2  1   93  121   102 0.996  13.41
 6.19 Intr - 125824 125756   69  0  0   34  115    80 0.920   3.60
 6.18 Intr - 129544 129417  128  1  2  127   83   119 0.954  14.78
 6.17 Intr - 129711 129631   81  0  0  121   39   105 0.998   8.73
 6.16 Intr - 134628 134517  112  2  1   91   86   161 0.963  16.58
 6.15 Intr - 137106 136991  116  0  2   54   66    48 0.280  -1.55
 6.14 Intr - 137625 137542   84  0  0  119   97    52 0.816   9.22
 6.13 Intr - 138904 138778  127  0  1   91   70   154 0.897  14.58
 6.12 Intr - 143397 143270  128  0  2  108   68   125 0.996  11.98
 6.11 Intr - 145749 145627  123  0  0   71   99   117 0.989  11.88
 6.10 Intr - 147810 147552  259  2  1  113   63    81 0.724   5.57
 6.09 Intr - 149323 149152  172  2  1   67   61   185 0.959  12.70
 6.08 Intr - 154850 154722  129  0  0   64   45    76 0.582   1.57
 6.07 Intr - 158894 158743  152  1  2  122   83   120 0.996  14.71
 6.06 Intr - 160774 160538  237  0  0   50   79   346 0.115  26.63
 6.05 Intr - 174029 173846  184  0  1   53   75    49 0.061  -1.05
 6.04 Intr - 179113 178861  253  1  1   66   95   293 0.726  24.81
 6.03 Intr - 182544 182386  159  0  0   99   88   117 0.775  12.98
 6.02 Intr - 187074 186974  101  1  2  143   86    44 0.906   9.53
 6.01 Init - 196847 196757   91  2  1  107  105   218 0.905  25.25
 6.00 Prom - 200631 200592   40                              -5.46

 7.06 PlyA - 201620 201615    6                               1.05
 7.05 Term - 203892 203508  385  2  1   57   42   176 0.016   4.26
 7.04 Intr - 210635 210568   68  2  2  109   21    66 0.062  -0.30
 7.03 Intr - 211052 210854  199  1  1  -26   83   287 0.414  16.15
 7.02 Intr - 214689 214527  163  1  1  101  -11   150 0.355   5.43
 7.01 Init - 214932 214779  154  0  1   39   91   141 0.593   9.64

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 203891 203508  384  2  0   76   42   178 0.856   8.19


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:6287211_6502443|GENSCAN_predicted_peptide_1|190_aa
MEYYAAIKNDEFMSFVGTWMKLETIILSKLSQGQKTKHRMFSLIVSCLTHPVNTKVEMGQ
DVHRLEGSPSGDSGRWILAVPAPQRLGQLLVASRKPTDRTARPHTQPLAAIVLLTVSPEL
SLLGTSLWKSTLRFQMEENRLKMKALKFYCEAGRGVPFPAHLQGTSQAWQENSHFLPMTE
NENDCFSGLF

>gi568815591f:6287211_6502443|GENSCAN_predicted_CDS_1|573_bp
atggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatggatg
aaactggaaaccatcattctcagcaaactatcgcaaggacaaaaaaccaaacaccgcatg
ttctcactcatagtgtcatgtctgacacatcctgttaacactaaagttgaaatgggacag
gatgtccacagacttgaaggctctccaagtggtgactcggggaggtggattcttgctgta
cctgccccacagaggctgggacagctcctggttgcttccagaaaaccgacagacagaact
gccaggccacatactcagcccctggcagccatcgttctacttactgtctctccggagctg
tctcttctaggaacctcattgtggaaaagcacgctgcgcttccaaatggaagaaaatcgc
cttaaaatgaaggcgttgaagttctattgtgaagcaggacgaggagtacccttcccagct
catctccaggggacctcacaggcctggcaggaaaacagccacttcctgcccatgactgaa
aatgaaaacgactgcttttcaggactgttctga

>gi568815591f:6287211_6502443|GENSCAN_predicted_peptide_2|259_aa
MRDRRGPLGTCLAQVQQAGGGDSDKLSCSLKKRMPEGPWPADAPSWMNKPVVDGNSQSEA
LSLEMRKDPSGAGLWLHSGGPVLPYVRESVRRNPASAATPSTAVGLFPAPTECFARVSCS
GVEALGRRDWLGGGPRATDGHRGQCPKGEPRVSRLPRHQKVPEMGSFQDDPPSAFPKGLG
SELEPACLHSILSATLHVYPEVLLSEETKRIFLDRLKPMFSKQTIEFKKMLKSTSDGLQI
TLGLLALQPFELANTLCHS

>gi568815591f:6287211_6502443|GENSCAN_predicted_CDS_2|780_bp
atgagggacagaagagggcccctcggcacctgcctggcacaagtgcagcaggccggagga
ggtgactcggacaaactatcatgcagccttaagaaaagaatgccggagggcccttggcct
gcagatgcaccctcctggatgaataagcctgtggttgatggaaattcacaaagtgaggca
ttatcactggaaatgagaaaggatccgagcggggctggcctctggcttcacagtggcggc
ccagtgcttccatatgtgagagaatcagtaagaagaaatccagcctcagcagccactccg
agcacagccgtgggtttgttccctgctccaacagagtgttttgctcgggtgtcctgcagt
ggtgttgaagctctggggcggcgagactggctgggaggagggcccagggccactgacggc
cacagaggacagtgccccaaaggagagcctcgggtgtcacgactgccacgccatcaaaaa
gtgccggaaatgggaagttttcaggatgacccaccaagtgcttttcccaagggtctgggc
tctgagttggaacccgcttgcctgcactccatcctgtctgcaacgctgcacgtgtatccc
gaagtgctcctgagtgaggagacaaaacgcattttccttgaccgtttaaagcccatgttt
tcaaagcaaacaatagaattcaagaaaatgcttaaaagcacctcagatggtctgcagata
acactggggttactggctctgcaaccttttgaattagcaaatacattatgccatagttaa

>gi568815591f:6287211_6502443|GENSCAN_predicted_peptide_3|118_aa
MAAALSGLAVRLSRSAAARSYGVFCKGLTRTLLIFFDLAWRLRINFPYLYIVASMMLNVR
LQVGCVEIRGFVSATSSLIIWAMSTVSWAGICEEGDRSCCGEDRVYLDSLVSPGTAPL

>gi568815591f:6287211_6502443|GENSCAN_predicted_CDS_3|357_bp
atggcggcggctctgtcgggcctggctgtccggctctcgcgctcggccgccgcccgctcc
tatggggtcttctgcaaggggctgactcgcacgctgctcatcttcttcgacctggcctgg
cggctgcgtatcaacttcccctacctctacatcgtggcttccatgatgctcaacgtccgc
ctgcaggtgggctgtgtggaaatccgggggtttgtttctgctacctccagtctgatcatt
tgggccatgagcacagtcagctgggcagggatctgcgaggaaggtgaccgctcctgttgt
ggtgaggatcgggtatacctggacagcctcgtttcccctggcacggcgcccctgtga

>gi568815591f:6287211_6502443|GENSCAN_predicted_peptide_4|396_aa
MAAATPRGRSRVGPSASEHSRSPEKLRERRGRERRGRERPRPEPGSGGAGAGEGRPDRPA
AAAAAQRAALMQAIKCVVVGDGLPATLQLEASSKIQCFLGNLKPVTFQVGSSPHVLNKKR
AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSY
PQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEK
KLTPITYPQGLAMAKEIGMESCVFPPPCTSFIVVTETGVQSGKGGCVSPTQGLVYSWGTS
WQGPVGLNVSVGRWKQGWEPAEGARAPGAASRWWCDQKRVGSSVHCRVVVFPVGAVKYLE
CSALTQRGLKTVFDEAIRAVLCPPPVKKRKRKCLLL

>gi568815591f:6287211_6502443|GENSCAN_predicted_CDS_4|1191_bp
atggcggctgccacgccccgcggccggagccgagtgggcccgagcgcttccgagcattcc
cgaagtccagagaaactccgggagcggcgcgggcgggagcggcgcgggcgggagcggccc
cgcccggaacctgggagcggcggcgccggcgcgggggaggggaggccggatcgccctgcc
gccgccgccgcggcccagcgagcggccctgatgcaggccatcaagtgtgtggtggtggga
gacgggcttcctgccacactgcagttggaggcttcttctaaaatccagtgctttctgggc
aatttaaaacctgtgactttccaagtaggatctagtccccatgtccttaacaagaagaga
gctgtaggtaaaacttgcctactgatcagttacacaaccaatgcatttcctggagaatat
atccctactgtctttgacaattattctgccaatgttatggtagatggaaaaccggtgaat
ctgggcttatgggatacagctggacaagaagattatgacagattacgccccctatcctat
ccgcaaacagatgtgttcttaatttgcttttcccttgtgagtcctgcatcatttgaaaat
gtccgtgcaaagtggtatcctgaggtgcggcaccactgtcccaacactcccatcatccta
gtgggaactaaacttgatcttagggatgataaagacacgatcgagaaactgaaggagaag
aagctgactcccatcacctatccgcagggtctagccatggctaaggagattggtatggaa
tcctgtgtttttcctcctccttgtacctcttttattgtagtgacagagactggagtccag
tctgggaaaggagggtgtgtgtctcccactcagggcctggtgtactcttggggaaccagc
tggcaaggccctgtgggtcttaacgtcagcgttggaaggtggaagcagggctgggagccg
gcagaaggcgcccgggccccaggagctgcctcccgctggtggtgtgatcagaagagagtg
gggtcgagtgtacattgccgtgtggtcgtgtttcctgtaggtgctgtaaaatacctggag
tgctcggcgctcacacagcgaggcctcaagacagtgtttgacgaagcgatccgagcagtc
ctctgcccgcctcccgtgaagaagaggaagagaaaatgcctgctgttgtaa

>gi568815591f:6287211_6502443|GENSCAN_predicted_peptide_5|154_aa
MLWLGTQRKRCDSELTLKAHSGESGKELLKMKSIRQNQKLKDNKPGKEKGYEDTPGLTSE
FESHEFPRRKEAIKRTARWIKETLGCGREKDNLTRKKYIPTEMAKKNHGRTALRILKGLA
KQNSSLEEIAVLFKISAKAGQKTRYEITKTDPKS

>gi568815591f:6287211_6502443|GENSCAN_predicted_CDS_5|465_bp
atgctatggcttgggactcagagaaagcgctgtgactcagaactgaccctgaaggcccac
agtggggagagtggaaaagagctcctgaagatgaaaagcatcagacaaaatcaaaagctc
aaagataacaaaccaggaaaagaaaaaggttacgaggacactccaggtctgacatctgag
tttgaaagtcacgagtttccaagacggaaagaggccatcaagcgcacagcacggtggata
aaagaaaccctaggatgtggaagagaaaaggacaatctcacaagaaaaaaatacatccca
acagaaatggctaagaaaaatcatggaagaactgccctcagaattctgaagggactagct
aaacagaattcttcattagaggaaatagcagttctgttcaaaatctccgcaaaagctggt
cagaaaactcgctatgaaatcacaaagactgatccaaagagctga

>gi568815591f:6287211_6502443|GENSCAN_predicted_peptide_6|1075_aa
MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN
TSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLVNHDFSPLEILW
TFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLVNWIWRFYFEGFFDLIA
VVAGVVQTILYCDFFYLYITKGGHLSKGACEGVWDWASSSPALETKALYATPYEALFHSY
FHFPNKGYQVINIFIEVFVCFSIVSMRRSPPSLRLRLSADNLVAASGGCWFVLGERRAGS
LLSASYGTFAMPGMVLFGRRWAIASDDLVFPGFFELVVRVLWWIGILTLYLMHRGKLDCA
GGALLSSYLIVLMILLAVVICTVSAIMCVSMRGRIQKPFIVALLAEAVSPLTAQGKLTYR
AGESWEKHKEMEACLGTICNPGPRKSMSKLLYIRLALFFPEMVWASLGAAWVADGVQCDR
TVVNGIIATVVVSWIIIAATVVSIIIVFDPLGGKMAPYSSAGPSHLDSHDSSQLLNGLKT
AATSVWETRIKLLCCCIGKDDHTRVAFSSTAELFSTYFSDTDLVPSDIAAGLALLHQQQD
NIRNNQEPAQVVCHAPGSSQEADLDAELENCHHYMQFAAAAYGWPLYIYRNPLTGLCRIG
GDCCRSRTTDYDLVGGDQLNCHFGSILHTTGLQYRDFIHVSFHDKVYELPFLVALDHRKE
SVVVAVRGTMSLQALVACRSPGEVRTADIHPQPMAPLLSSSVHTPGPLGDARLTAASATP
FLQDVLTDLSAESEVLDVECEVQDRLAHKGISQAARYVYQRLINDGILSQAFSIAPEYRL
VIVGHSLGGGAAALLATMLRAAYPQVRCYAFSPPRGLWSKALQEYSQSFIVSLVLGKDVI
PRLSVTNLEDLKRRILRVVAHCNKPKYKILLHGLWYELFGGNPNNLPTELDGGDQEVLTQ
PLLGEQSLLTRWSPAYSFSSDSPLDSSPKYPPLYPPGRIIHLQEEGASGRFGCCSAAHYS
AKWSHEAEFSKILIGPKMLTDHMPDILMRALDSVVSDRAACVSCPAQGVSSVDVA

>gi568815591f:6287211_6502443|GENSCAN_predicted_CDS_6|3228_bp
atgaacattttccggctgactggggacctgtcccacctggcggccatcgtcatcctgctg
ctgaagatctggaagacgcgctcctgcgccggtatttctgggaaaagccagcttctgttt
gcactggtcttcacaactcgttacctggatctttttacttcatttatttcattgtataac
acatctatgaaggttatctaccttgcctgctcctatgccacagtgtacctgatctacctg
aaatttaaggcaacctacgatggaaatcatgataccttccgagtggagtttctggtggtc
cctgtgggaggcctctcatttttagttaatcacgatttctctcctcttgagatcctctgg
accttctccatctacctggagtccgtggctatccttccgcagctatttatgatcagcaag
actggggaggccgagaccatcaccacccactacctgttcttcctgggcctctatcgtgct
ttgtatcttgtcaactggatctggcgcttctactttgagggcttctttgacctcattgct
gtggtggccggcgtagtccagaccatcctatactgtgacttcttctacttgtacattaca
aaaggaggacatcttagcaagggtgcctgcgagggagtgtgggactgggcctcatcctcg
ccggcgttggaaaccaaggccttgtatgccacgccttatgaagcactgtttcacagttac
tttcacttcccgaataaaggttaccaggtaattaatatttttattgaggtgtttgtgtgt
ttttcaatcgtgagcatgcgcaggtccccgccctcgctgcgtttgcgcttgagcgccgat
aatttggtggcggcgtccggagggtgctggtttgttctcggtgaacggcgcgcggggtct
ctcctgagtgcgagctacgggaccttcgccatgccggggatggtactcttcggccggcgc
tgggccatcgccagcgacgacttggtcttcccagggttcttcgagctggtcgtgcgagtg
ctgtggtggattggcattctgacgttgtatctcatgcacagaggaaagctggactgtgct
ggtggagccttgctcagcagttacttgatcgtcctcatgattctcctggcagttgtcata
tgtactgtgtcagccatcatgtgtgtcagcatgagaggaaggatccaaaagccatttatc
gtcgctctcctggctgaagctgtgtctccactcacagcgcagggcaagctgacatacagg
gcaggggagagctgggagaagcacaaggagatggaggcttgtctcggaacgatttgtaac
cctggaccgcggaagtctatgtctaagctgctttacatccgcctggcgctgttttttcca
gagatggtctgggcctctctgggggctgcctgggtggcagatggtgttcagtgcgacagg
acagttgtaaacggcatcatcgcaaccgtcgtggtcagttggatcatcatcgctgccaca
gtggtttccattatcattgtctttgaccctcttggggggaaaatggctccatattcctct
gccggccccagccacctggatagtcatgattcaagccagttacttaatggcctcaagaca
gcagctacaagcgtgtgggaaaccagaatcaagctcttgtgctgttgcattgggaaagac
gaccatactcgggttgctttttcgagtacggcagagcttttctcaacctacttttcagac
acagatctggtgcccagcgacattgcggcgggcctcgccctgcttcatcagcaacaggac
aatatcaggaacaaccaagagcctgcccaggtggtctgccatgccccagggagctcccag
gaagctgatctggatgcagaattagaaaactgccatcattacatgcagtttgcagcagcg
gcctatgggtggcccctctacatctacagaaaccccctcacggggctgtgcaggattggt
ggtgactgctgcagaagcagaaccacagactatgacttggtcggaggcgatcagctcaac
tgtcacttcggctccatcctgcacaccacagggctgcagtacagggacttcatccacgtc
agcttccatgacaaggtttacgagctgccgtttttagtggctctggatcacaggaaagag
tctgttgtggtcgctgtgagggggaccatgtctctgcaggccctcgtggcctgccgttct
ccaggtgaggtcaggactgccgacatccatccccagcccatggcccctcttctgtcttcc
tcagtccatactcctgggccccttggagatgccaggctgacggccgcttctgcaacgccc
tttttacaggatgtccttacggacctgtcagcggagagtgaggtgctggacgtggagtgt
gaggtgcaggaccgcctggcacacaagggtatttctcaagctgccagatacgtttaccaa
cgactcatcaacgacgggattttgagccaagccttcagcattgctcctgagtaccggctg
gtcatagtgggccacagcctcgggggcggggcggccgccctgctggccaccatgctcaga
gccgcctacccgcaggtcaggtgctacgccttctccccaccccgggggctgtggagcaaa
gctctgcaggaatattctcagagcttcatcgtgtcactcgtcctggggaaggatgtgatt
cccaggctcagtgtgaccaacttggaagatctgaagagaagaatcttgcgagtggtcgcg
cactgcaataaacccaagtacaagatcttgctgcacggtttgtggtacgaactgtttgga
ggaaaccccaacaacttgcccacggagctggacgggggcgaccaggaagtcctgacacag
cctcttctgggggagcagagcctactgacgcgctggtccccggcctacagcttctccagc
gactccccactggactcttctcccaagtacccccctctctaccctcccggcaggatcatc
cacctgcaggaggagggcgcctcggggcggtttggctgctgctctgctgctcactatagc
gccaagtggtcacacgaagcggaattcagcaaaatactcataggtccgaagatgctcacc
gaccacatgccagacatcctgatgcgggccttggacagcgtggtctccgacagagcggcc
tgcgtctcctgtccagcacaaggggtctccagtgtggacgtggcctga

>gi568815591f:6287211_6502443|GENSCAN_predicted_peptide_7|322_aa
MYIGGHLQLNSTKTVDGKSTFLHILAKSLSQHFPELLGFAQDLPTVPLAAKVNQRALTSD
LADLHGTISEIQDACQSISPSSEDKFAMVMSASSEQPVPAPGWILGGLAVSLTEACQSFL
ETAQPALRALDGLQREAMEELGKALAFFGEDSKATTSEAFFGIFAEFMSKFERALSDLQA
GEGLRSSGMVSPLAWMASAKKGGEKKGRSAISEAVTPEYTSAWVEWASRSAPRAHREIQK
FAMKEMGTPNLHIDVRLNKALWAKGIRNVPYHIHMKLPRKLNEDEDSPDKLYALVPTYTC
YHFHKSIDRQCGRELTTDGSIH

>gi568815591f:6287211_6502443|GENSCAN_predicted_CDS_7|969_bp
atgtatattgggggtcacttgcagctgaactccaccaagacagtggatgggaagtccacc
ttcctgcacatccttgccaaatcgctgagccagcacttccctgaactcctgggctttgct
caggacctgcccaccgtgcccctggctgccaaagtgaaccaacgggccctgaccagtgac
ctggctgacctccatggcactatcagcgagatacaggatgcctgccagagcatttccccc
tctagcgaggacaagtttgcaatggtcatgtcggcatcctctgagcagcctgttcctgca
ccaggctggatcctgggcgggctggctgtttccttaactgaggcctgtcagtccttcctg
gagacggcccagccagcacttcgggcgctcgacgggctgcagcgcgaggccatggaggag
ctgggcaaggcgctggccttctttggggaggattccaaggccaccacctctgaggctttc
ttcggcatctttgcagagttcatgagcaaattcgagcgagcgctgagtgacctgcaggcc
ggggagggcctgcgcagctccgggatggtttcacccctggcctggatggcttctgcaaag
aagggtggcgagaagaaaggtcgttccgccattagtgaggcggttaccccagaatacacc
agcgcatgggtggagtgggcttcaagaagtgcccctcgggcacacagagagatccagaaa
ttcgccatgaaggagatggggactccaaatttgcacattgatgtgaggctcaacaaagct
ctctgggccaaaggaataaggaatgtcccataccatatccatatgaagttgcccagaaaa
cttaatgaggatgaagattcaccagacaagctctatgctttggttcctacatatacctgt
taccactttcacaaatctatagacaggcaatgtggaagagagctaaccactgatggttca
atacattaa