GENSCAN 1.0	Date run:  4-Nov-116	Time: 11:02:35

Sequence gi568815586f:69259973_69490313 : 230341 bp : 39.50% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +     72    225  154  1  1  148   93   113 0.992  16.01
 1.02 Term +   2398   2587  190  1  1    8   43   377 0.903  21.14
 1.03 PlyA +   2987   2992    6                               1.05

 2.00 Prom +  10775  10814   40                              -6.45
 2.01 Init +  27778  27819   42  0  0   70   75    39 0.204   1.28
 2.02 Intr +  33275  33671  397  1  1   42   53   190 0.030   4.13
 2.03 Intr +  47574  49097 1524  1  0   15   47   364 0.148  13.60
 2.04 Term +  52733  52890  158  0  2   37   41   144 0.165   1.71
 2.05 PlyA +  53321  53326    6                               1.05

 3.02 PlyA -  53485  53480    6                               1.05
 3.01 Sngl -  56577  56266  312  0  0   99   37   230 0.614  14.68
 3.00 Prom -  58557  58518   40                              -0.95

 4.03 PlyA -  58674  58669    6                               1.05
 4.02 Term -  64033  63891  143  2  2   36   49   132 0.398   1.21
 4.01 Init -  71327  71105  223  2  1   63   60   250 0.122  18.46
 4.00 Prom -  71812  71773   40                              -4.45

 5.00 Prom +  80040  80079   40                              -4.45
 5.01 Init +  88437  88572  136  2  1  100   93    92 0.902  11.57
 5.02 Intr +  90136  90300  165  2  0   27   83    93 0.725   1.71
 5.03 Intr +  92248  92326   79  2  1   77   80   105 0.912   6.29
 5.04 Intr +  95939  96008   70  2  1   82  100    14 0.526   0.27
 5.05 Intr + 100382 100474   93  1  0   63   23   105 0.497   0.74
 5.06 Intr + 102816 102935  120  2  0   74   80   103 0.887   7.87
 5.07 Intr + 105661 105727   67  0  1   67   72    39 0.693  -2.24
 5.08 Intr + 105818 105912   95  0  2   83   76    72 0.688   4.26
 5.09 Intr + 110734 110826   93  0  0   92   95    61 0.809   6.44
 5.10 Term + 111686 111802  117  1  0   49   45   104 0.390  -0.24
 5.11 PlyA + 116396 116401    6                               1.05

 6.02 PlyA - 117011 117006    6                               1.05
 6.01 Sngl - 122446 121733  714  1  0   69   49   278 0.498  17.98
 6.00 Prom - 126886 126847   40                              -5.45

 7.00 Prom + 143302 143341   40                              -4.45
 7.01 Init + 151786 151900  115  0  1   72   64    83 0.398   4.72
 7.02 Intr + 155561 155748  188  0  2   40   94    85 0.588   2.79
 7.03 Intr + 162779 163024  246  1  0   33   32   157 0.439   1.33
 7.04 Term + 164029 164085   57  0  0  114   54    88 0.932   4.71
 7.05 PlyA + 164135 164140    6                               1.05

 8.00 Prom + 164696 164735   40                              -5.05
 8.01 Init + 169161 169424  264  2  0   54   75   156 0.209   7.96
 8.02 Term + 178595 178645   51  1  0   90   49    69 0.088  -0.35
 8.03 PlyA + 179626 179631    6                               1.05

 9.08 PlyA - 180381 180376    6                               1.05
 9.07 Term - 187177 187103   75  1  0   64   48    76 0.297  -1.94
 9.06 Intr - 199231 199154   78  1  0   45   94    69 0.038   2.03
 9.05 Intr - 210732 210548  185  1  2   45   53   246 0.637  15.39
 9.04 Intr - 211132 210925  208  1  1   26   -3   190 0.408   1.43
 9.03 Intr - 211615 211442  174  1  0  107   92     7 0.414   2.21
 9.02 Intr - 216515 216347  169  1  1   93   30   102 0.648   3.93
 9.01 Init - 221135 221086   50  2  2   69   95    14 0.503   0.68

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:69259973_69490313|GENSCAN_predicted_peptide_1|114_aa
XDYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRER
DHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR

>gi568815586f:69259973_69490313|GENSCAN_predicted_CDS_1|345_bp
ngtgattatgggagtgctattgagacactggtaactgcaatttctttaattaaacaatcc
aaagtatctgctgatgatcgttgcaaagttcttattagttctttgcaagattgccttcat
ggaattgagtccaagtcttatggttctggatcaagaagacgtgaacgatcaagagagagg
gaccatagtagatcacgagaaaagagtcgacgtcataaatcccgtagtagagaccgtcat
gacgattattacagagagagaagcagagaacgagagaggcaccgggatcgtgaccgagac
cgtgaccgagagcgtgaccgagagcgcgaatatcgtcatcgttag

>gi568815586f:69259973_69490313|GENSCAN_predicted_peptide_2|706_aa
MTSIGACFLEKLAKNNHTEDRQGNRRHEHSIDQLAVTDVHSTTAEYTFLSTRGGFSKIDH
MLGCKTNLNKYKEIEIIQSIFSNHNEIKQEINSRRKTRKSTNLWELSSALLMNGSEKKTQ
VNLDNIWKLMKAKMQHITLMECSESRKNKIPRNPTYKGREGPLQGELQTTAQGNKRGYKQ
MEEHPMLMGGRINTVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAK
SILSQKNKAGGLTLPDFKLFYKATVTKTAWYWYQNRDIDQWNRTEPSEIMPHIYNYVIFD
KPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLTVRPKTIKTLE
ENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTGKETTIRVNRQPTKWKK
IFATYSSDKGLISRIYNELKQIYKKKTNNPIKKWVKDMNRHFSKEDIYAAKKHMKKCSPS
LAVREMQIKTTMRYHLTPVRMAIIKKSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVW
QFLRDLELEIPFDPAIPLLGIYPRDYKSCCYKDTCTRMFIAALFTIAKTWNQPKCPTMID
WIKKMWHIYTMEYYAAIKNDEFMSFVGTWMKLEIIFLSKLLQEQKTKHRIFSLIDSKPAP
QDSGAIIGLQEPEPMTLAQDLLHLKSSATEAACRAISPDTKRDPLG

>gi568815586f:69259973_69490313|GENSCAN_predicted_CDS_2|2121_bp
atgacctcaattggagcctgcttcctggagaaattggccaagaacaaccatacagaagat
cgacaaggaaacagaagacatgaacacagtatagatcagttggctgtaactgatgtccac
tcaacaacagcagaatacacattcttaagtactcgtggaggcttctccaagatagaccac
atgttaggctgtaaaacaaatcttaacaaatataaggagattgaaatcatacaaagtatc
ttctccaatcacaatgaaataaaacaagaaatcaatagcagaaggaaaacaagaaagtcc
acgaatttgtgggaactaagcagtgccctcttaatgaatgggtcagagaagaaaacacaa
gtgaatttagataatatctggaaactaatgaaagcaaaaatgcaacatatcacacttatg
gaatgcagtgaaagtagaaagaataaaatacctaggaatccaacttacaagggacgtgaa
ggacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggatacaaacaa
atggaagaacatcccatgctcatgggtggaagaatcaataccgtgaaaatggccatactg
cccaaggtaatttacagattcaatgccatccccatcaagctaccaatgactttcttcaca
gaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccgcatcgccaag
tcaatcctaagccaaaagaacaaagctggaggcctcacactacctgacttcaaactattc
tacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatatagatcaa
tggaacagaacagagccctcagaaataatgccgcatatctacaactatgtgatctttgac
aaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaa
aactggctagccatatgtagaaagctgaaactggatcccttccttacaccttatacaaaa
atcaattcaagatggattaaagacttaaccgttagacctaaaaccataaaaaccctagaa
gaaaacctgggcattaccattcaggacataggcatgggcaaggacttcatgtctaaaaca
ccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagc
ttctgcacaggaaaagaaactaccatcagagtgaacaggcaacctacaaagtggaagaaa
atttttgcaacctactcatctgacaaagggctaatatccagaatctacaatgaactcaaa
caaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggtgaaggacatgaacaga
cacttctcgaaagaagacatttatgcagccaaaaaacacatgaaaaaatgctcaccatca
ctggccgtcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttaga
atggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaatagga
acacttttacactgttggtgggactgtaaactagttcaaccattgtggaagtcagtgtgg
caattcctcagggatctagaactagaaataccatttgacccagccatcccattactgggt
atatacccaagagactataaatcatgctgctataaagacacatgcacacgtatgtttatt
gcagcattattcacaatagcaaagacttggaaccaacccaaatgtccaacaatgatagac
tggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaatgat
gagttcatgtcctttgtagggacgtggatgaaattggaaatcatctttctcagtaaacta
ttgcaagaacaaaaaaccaaacaccgcatattctcactcatagacagcaaacctgcacca
caagattcaggtgccataataggtttgcaagaacctgagcctatgaccctagcccaagac
ctactgcatctgaaatccagtgccactgaagctgcttgcagggccatcagtcctgacacc
aagagggatccccttggctaa

>gi568815586f:69259973_69490313|GENSCAN_predicted_peptide_3|103_aa
MAKKGQHKTQAIASEGASPKAWWLTCGVGPVGAEKARIEIWEPPPRFQRMYRNAWVSRQK
CAAGVEPSWRTSVRAVQKGNVGLEPPHSVPTGALPSGAVRRGP

>gi568815586f:69259973_69490313|GENSCAN_predicted_CDS_3|312_bp
atggctaaaaagggccaacataaaactcaagccattgcttcagagggtgcaagccccaag
gcttggtggctgacatgtggtgttgggcctgtgggtgcagagaaggcaagaattgagatt
tgggaacctccacctagatttcagaggatgtatagaaatgcctgggtgtccaggcagaag
tgtgctgcaggggtggaaccttcatggagaacctctgtgagggcagtgcagaagggaaat
gtggggctggagcccccacacagcgtccccactggggcactccctagtggagctgtgaga
agagggccatag

>gi568815586f:69259973_69490313|GENSCAN_predicted_peptide_4|121_aa
MQNRQGNQVYVYKKIRKKALGAESRAAEQAVNKKKGSAARKFTETEPAQAKGSAFTRVKQ
LPPRDPPAQLSSSAVLEAGSLRSELASLGSCKGSLPGFADCHLLPVSSYGEERVLNLFFF
L

>gi568815586f:69259973_69490313|GENSCAN_predicted_CDS_4|366_bp
atgcagaatcggcaaggcaatcaggtgtatgtttataaaaagataagaaaaaaggcatta
ggagccgaaagccgtgcagccgagcaagcagtaaataaaaagaaaggctcggcagcccgg
aagttcacagaaacagagccagcacaggcaaaaggcagcgcttttacaagagtaaaacag
ctaccgcccagggacccgccggctcagctctctagctctgcagttttagaggctggaagt
ctgagatcggaactagcatcattaggttcttgtaagggctctcttcctggctttgcagac
tgccaccttctccctgtatcttcctatggtgaagaaagagttctgaatctcttcttcttc
ttataa

>gi568815586f:69259973_69490313|GENSCAN_predicted_peptide_5|344_aa
MKALIVLGLVLLSVTVQGKVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRA
TNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRD
PQGIRAWWHSVFAVLICPIIDDVHLDHLIKVIGEAVTPPSWCEDNNNCSKQSLSAYPQYF
QGVTIVKPIVYGNVARYFGKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGN
PLRVVTKPPYEITETGWGEFEIIIKIFFIDPNERPVTLYHLLKLFQSDTNAMLGKKTVVS
EFYDEMVLAAEVRAVPESDKKPYRHGSYILVGGKQVLNKQNKEV

>gi568815586f:69259973_69490313|GENSCAN_predicted_CDS_5|1035_bp
atgaaggctctcattgttctggggcttgtcctcctttctgttacggtccagggcaaggtc
tttgaaaggtgtgagttggccagaactctgaaaagattgggaatggatggctacagggga
atcagcctagcaaactggatgtgtttggccaaatgggagagtggttacaacacacgagct
acaaactacaatgctggagacagaagcactgattatgggatatttcagatcaatagccgc
tactggtgtaatgatggcaaaaccccaggagcagttaatgcctgtcatttatcctgcagt
gctttgctgcaagataacatcgctgatgctgtagcttgtgcaaagagggttgtccgtgat
ccacaaggcattagagcatggtggcattcagtttttgcagttttgatttgccccattatt
gatgatgttcacttggatcacttgattaaggttattggtgaagcggtgacgccaccctcc
tggtgtgaggataacaataactgtagcaaacagtcgctgagcgcttacccgcagtatttc
caaggtgttactatcgttaaaccaatagtttacggtaatgttgctcggtattttggaaag
aaaagagaagaagatgggcacactcatcagtggacagtatatgtgaaaccatatagaaat
gaggatatgtcagcatatgtgaagaaaatccagtttaaattacatgaaagctatggcaat
cctttaagagttgttactaaacctccatatgaaattactgaaacaggatggggtgaattc
gaaataatcatcaaaatatttttcattgaccctaatgaaagacctgtaaccctgtatcat
ttgctaaagctgtttcaatcagacaccaatgcaatgctggggaaaaagacagtggtttca
gagttctatgatgaaatggtgctagctgctgaggttagagcagtgcctgaatcagacaaa
aagccctatcgtcatgggtcctacattctagtgggaggaaaacaggtattaaataaacag
aacaaggaagtataa

>gi568815586f:69259973_69490313|GENSCAN_predicted_peptide_6|237_aa
MLSCSLGASSATVKQSTRIIPKVSNSRPWLLDRISGPTRSPGKLSALKGWTQANQINDLR
QSVIWLGDWVVSLEHRMQMQCNWNTLDFCIIPYSYNETDYSWEMVKGRLLGREDNLSLDI
TKLKKQIFEASQAHLSIVPGAEALDQVAENLYGLNPTTWIKSIGGSTVVNCGITFLCLIS
LFLVCRTSQRILGKNQENEQAFITMAHLYKKKGRDVAGSQEPRTEGTAEAMAEEHKL

>gi568815586f:69259973_69490313|GENSCAN_predicted_CDS_6|714_bp
atgctgtcttgtagcttgggtgccagctcagccacagtaaaacagagcaccaggattatt
cctaaggtttccaactccaggccctggctcctggacagaatctctggacctacccgcagc
ccagggaaactcagtgcccttaagggatggacacaagctaatcaaattaatgatttaaga
cagtctgttatttggcttggagattgggtggtgagtctcgaacatcgcatgcaaatgcag
tgcaactggaatactttggatttctgtatcatcccctattcctataatgagactgattat
tcatgggaaatggtcaaaggacgccttctgggtagggaagataatttatcattggacata
actaaattaaagaaacaaatttttgaagcctctcaagctcacttatccattgtgcctgga
gctgaggcgttagatcaggtggcagaaaatctttatggattaaaccccacgacttggatt
aagtctattgggggctccactgtagtaaattgtggaattacatttctctgtttaatcagc
ttgtttttagtgtgccggaccagtcaaagaatcctgggtaaaaatcaagagaatgaacaa
gccttcatcaccatggcacatttatataaaaagaaagggagagatgttgcgggaagtcag
gaaccccgaacggagggaacggctgaagccatggcagaagaacataaattgtga

>gi568815586f:69259973_69490313|GENSCAN_predicted_peptide_7|201_aa
MVQAEETARANSLKRKHSWCVWGVPQGPMWPMPSEQGEAWATKGDHVLKTNKQVFGASNG
PSDSNNFKASRDPMAKMGEEQPQCVGKGGYNYKSQDCVWGQDKAIKFVIKNKVEAIAIRA
ISEVSVFNTCASQLYEKLHCDMSCAIHGKVVRSHSHEAQKDPIPLPDLDLMVLFHDLRES
PYKILLYEDVMFGAAAIILES

>gi568815586f:69259973_69490313|GENSCAN_predicted_CDS_7|606_bp
atggtccaggcagaagaaactgccagggcaaactctctgaagcgaaagcattcctggtgt
gtctggggagtaccccaggggccaatgtggccgatgccaagtgagcaaggggaagcctgg
gcaacaaagggagatcatgtcttaaaaacaaacaaacaggtatttggagcaagcaatgga
cccagtgacagtaacaatttcaaagcaagtagagatccaatggcaaagatgggagaggaa
cagcctcaatgtgtaggaaaaggtggctataactacaaaagccaagactgtgtatgggga
caggacaaggccattaagttcgtcattaaaaacaaagtagaggccatagccatcagggcc
atttctgaagtgagtgtctttaacacctgtgcttcccagctgtatgagaaactgcattgt
gatatgagttgtgccattcatggaaaagtagtcaggagtcattctcatgaagcccagaag
gatccaatacccctccctgatttagacctaatggtgctgttccatgacctccgcgaaagc
ccgtataagatattactctatgaagatgtaatgtttggagctgcagcgatcattttggaa
tcatga

>gi568815586f:69259973_69490313|GENSCAN_predicted_peptide_8|104_aa
MTKQVKKQKYVTHNQKNNHSKETDPEMTDTELAEKNIKTPIIIIVDYLNENMNKVRKEIE
GIKKREREKFQENDTILKKERSEEDKIKMRKQSPEMVKLERCER

>gi568815586f:69259973_69490313|GENSCAN_predicted_CDS_8|315_bp
atgactaaacaagtcaagaagcagaaatatgtgacccataaccagaaaaataatcactca
aaggaaacagacccagaaatgacagatacagaattagcagagaagaatattaaaacacct
attataattattgttgactatttaaatgaaaacatgaacaaagtgaggaaagaaattgaa
ggcattaaaaaaagagagagagagaagtttcaggagaatgacaccatactgaaaaaagaa
aggagtgaagaagacaaaattaagatgagaaaacagagtccagagatggtgaagctagag
cgttgtgaacgctga

>gi568815586f:69259973_69490313|GENSCAN_predicted_peptide_9|312_aa
MDKGYTEVYCTILATFLRSEMESQFLLLHYVKGELFILLANQQSNNLKQHPQAAPTVQQF
SPEALVEKHSLKQEILSLSEVNTSWNKFKQNISAHLCETLHCSNNFNSVRNLSRKSKNNF
SLRKMTVPNMKDRFRAQSKSIPDNPEANLDEKPCKRSLACTGSAPPWREKTTPLGPGLIT
DPRTDPEEAKSRELEPKIESASSSRPAGPEKSAAVDNPLPRTPAAEPSARIPKRAAGARE
RQLRRGPAAVPVRFPSHSPSAQLALRHMLKKKKEEEKKRRGKKEKKESKKEMLLSGEIEP
EQLWTLQLLGIQ

>gi568815586f:69259973_69490313|GENSCAN_predicted_CDS_9|939_bp
atggataaagggtatacagaggtctactgcactattcttgcaactttcctaagaagtgaa
atggaaagccaatttctgctgcttcactatgtcaaaggcgagttatttatcttgttggct
aatcaacagagtaataacttaaagcagcacccccaggcagcgcccacagttcaacagttt
tctccagaggctctggttgagaaacacagtcttaaacaagaaatcctcagtttatccgaa
gtaaacacttcatggaataagtttaaacaaaacatctctgcccacctgtgtgaaactctg
cattgcagcaacaattttaacagtgtaaggaatctctcaagaaaatccaagaacaatttt
tccttaagaaaaatgacagttccaaatatgaaggaccggttccgagcccagtccaaatcg
atcccggacaaccctgaagcaaatctggatgaaaagccctgcaaaagatccctggcatgt
acaggcagcgccccaccctggagggaaaagacgacacccctgggacccgggttaattact
gaccccaggacagacccagaggaggcgaaaagtcgggaactggagcccaagattgagtct
gccagctcttcccgtcccgctggcccggagaagtccgcggcggtcgacaatccccttccc
cggacgccggcagccgagccctcagcccggatcccgaagcgggcagcgggggcacgagaa
cgccagctccgacgcgggcccgcggccgtcccagtccgtttccctagccactcaccgtcc
gcccagctggccttgaggcacatgctaaagaaaaagaaggaggaggagaaaaagaggaga
ggaaaaaaagagaaaaaagaaagcaaaaaagaaatgcttctatctggagagattgaaccc
gaacaactctggaccctgcaactattgggcattcagtga