GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:58:05

Sequence gi568815578r:35179566_35384487 : 204922 bp : 45.79% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3885   3957   73  2  1   80   65   108 0.951   8.93
 1.02 Term +  10078  10106   29  2  2   51   41    68 0.393  -3.36
 1.03 PlyA +  10299  10304    6                               1.05

 2.00 Prom +  16825  16864   40                              -5.66
 2.01 Init +  19439  19909  471  1  0  114   61   124 0.807   7.83
 2.02 Term +  28844  28846    3  1  0  131   48     0 0.468  -2.80
 2.03 PlyA +  29412  29417    6                               1.05

 3.05 PlyA -  32623  32618    6                               1.05
 3.04 Term -  32911  32898   14  2  2  127   28    16 0.195  -2.14
 3.03 Intr -  38589  38433  157  0  1   56   91    51 0.070   1.78
 3.02 Intr -  45387  45240  148  2  1   78   46    33 0.119  -1.66
 3.01 Init -  47460  47078  383  0  2   61   56   426 0.927  31.04
 3.00 Prom -  54508  54469   40                               0.64

 4.00 Prom +  54892  54931   40                              -4.96
 4.01 Init +  56428  56628  201  0  0   54   87    63 0.388   1.13
 4.02 Intr +  67275  67423  149  2  2  108   54   180 0.357  15.63
 4.03 Intr +  72340  72456  117  1  0   92   49    59 0.272   1.98
 4.04 Intr +  74885  75189  305  2  2   91  103   256 0.965  23.63
 4.05 Intr +  84226  84387  162  2  0  105   66   303 0.977  29.75
 4.06 Intr +  87640  87854  215  2  2   82   97   226 0.935  21.33
 4.07 Intr +  90195  90333  139  2  1  125   90   238 0.983  27.74
 4.08 Intr +  92004  92274  271  1  1   97   74   405 0.703  36.60
 4.09 Term +  94624  95044  421  1  1   85   53   807 0.732  71.66
 4.10 PlyA +  97415  97420    6                               1.05

 5.08 PlyA -  97614  97609    6                              -3.64
 5.07 Term -  98367  98149  219  0  0  104   49   162 0.445  10.94
 5.06 Intr -  98535  98481   55  2  1  -40   90    22 0.103 -11.42
 5.05 Intr - 100182 100001  182  0  2   80   82   214 0.879  18.67
 5.04 Intr - 100553 100377  177  2  0   59   91   141 0.994  11.62
 5.03 Intr - 101264 101089  176  0  2   83   72   207 0.999  18.26
 5.02 Intr - 104696 104611   86  1  2   94   82   213 0.960  20.76
 5.01 Init - 104922 104816  107  0  2   83   80   166 0.937  14.99
 5.00 Prom - 105513 105474   40                             -15.42

 6.05 PlyA - 106189 106184    6                               1.05
 6.04 Term - 108407 106970 1438  1  1  129   42   929 0.904  82.72
 6.03 Intr - 109020 108896  125  0  2   73   99   168 0.999  15.78
 6.02 Intr - 109393 109226  168  1  0  104   77   201 0.999  20.74
 6.01 Init - 112739 112227  513  2  0   65  103   797 0.980  71.80
 6.00 Prom - 120943 120904   40                              -6.06

 7.08 PlyA - 121672 121667    6                               1.05
 7.07 Term - 124504 124370  135  1  0  107   45   153 0.738  10.92
 7.06 Intr - 127214 127101  114  2  0   79  109   116 0.975  13.44
 7.05 Intr - 135200 135123   78  2  0   90   94    62 0.866   6.75
 7.04 Intr - 135638 135612   27  2  0   71   98    29 0.551   0.51
 7.03 Intr - 151483 151412   72  1  0   71  113    23 0.504   2.70
 7.02 Intr - 153684 153607   78  0  0   34   92    85 0.638   3.25
 7.01 Init - 155420 155385   36  2  0   75  102    87 0.683   6.82
 7.00 Prom - 161233 161194   40                              -5.66

 8.07 PlyA - 161814 161809    6                               1.05
 8.06 Term - 166253 166230   24  2  0  105   54    20 0.803  -1.48
 8.05 Intr - 166858 166676  183  1  0   54   -1   180 0.680   5.68
 8.04 Intr - 167707 167599  109  0  1   91   98    59 0.783   7.49
 8.03 Intr - 180392 180290  103  0  1  109   56    52 0.380   3.33
 8.02 Intr - 194691 194619   73  0  1   72   97    69 0.948   5.18
 8.01 Init - 201366 201307   60  0  0   78  119     3 0.559   3.66

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:35179566_35384487|GENSCAN_predicted_peptide_1|33_aa
MIESFLRPHQKKMLVPCFLYILQKWGITEPADM

>gi568815578r:35179566_35384487|GENSCAN_predicted_CDS_1|102_bp
atgattgaaagcttcctgaggcctcaccagaagaagatgctggtgccatgcttcctgtac
atcctgcagaagtggggcatcacggaacctgccgacatgtga

>gi568815578r:35179566_35384487|GENSCAN_predicted_peptide_2|157_aa
MPSQPPRTFIAKDNSLPGFKASKHRLTLLLGDNAAGDFKLKPMSMYHYENPRAIKNDVNS
LPMLHKWNNKAWMTAYLFIAWFTGYFKPTVETYCSGKKIPLKILLLIGNARGHPRALMEM
YKEIQVVFMLANTSFILQSMDQGVTSIFKSYLRNTGQ

>gi568815578r:35179566_35384487|GENSCAN_predicted_CDS_2|474_bp
atgcccagccagccacctaggacttttatagctaaagataactcattgcctggattcaaa
gcttcaaagcacaggctaactctcttactaggggataatgcagctggtgattttaagttg
aagccaatgtccatgtaccattatgaaaatcctagggccattaagaatgatgtgaattct
ctgcctatgctccataaatggaacaacaaagcctggatgacagcatatctgttcatagca
tggtttactggatattttaagcctactgttgagacctactgctcaggaaaaaagattcct
ctcaaaatattactactcattggcaatgcacgtggtcacccaagagccctgatggagatg
tacaaggagattcaggttgttttcatgcttgctaacacatcattcattctgcagtccatg
gatcaaggagtaacttcgattttcaagtcttatttaagaaatacaggccagtga

>gi568815578r:35179566_35384487|GENSCAN_predicted_peptide_3|233_aa
MPRARAPAPRASPTCPAKGASASSARATATATAARFPAPAAAAAARAAPGRQQSAGSSSS
SSRPGTRQRLQRGAWPGGGGGGGGPGAARPPRLLGIPAAGPAPGPPAFAAAAAASAASAP
PPPRAPPRMGVRKETDLRDNGHTRRGKGVWSDGKSRKMDGSIFTETESSCGGTGLKETQP
WAHLAQPMGQQEQQLFLQEVHLHSLHLQEPAHVQEPPVVQEQLGSISSRGPAT

>gi568815578r:35179566_35384487|GENSCAN_predicted_CDS_3|702_bp
atgccccgagcccgcgccccggccccgcgcgccagccccacctgcccggcgaagggcgcc
tccgcctcgtccgcccgcgccaccgccaccgccaccgctgcccggttccctgcccccgcc
gccgccgccgccgcccgcgcggcgcccgggaggcagcagagcgcgggcagcagcagcagc
agcagccgcccagggacccgccagcggctccagcgcggggcctggcccggcggcggcggc
ggcggcggcggccccggcgcggcgcggccgccccggctcctcggcatcccggcggcgggg
cccgcgcccggcccgcctgccttcgccgccgccgccgccgcctcggccgccagcgcgccc
ccgcctccgcgcgccccgccccggatgggggtgagaaaagagacagatttaagagacaat
gggcatacaagaagagggaaaggagtttggagtgatggcaaatcgagaaagatggatggt
agcatcttcacagaaacggagtcctcatgtggaggaactggcttgaaggagacacagccc
tgggcacacttggcacagcccatggggcagcaggagcagcagctcttcttgcaggaggtg
catttgcactctttgcacttgcaggagccggcgcacgtgcaggagccaccagtggtgcag
gagcagttggggtccatttcaagccgcggacctgctacgtaa

>gi568815578r:35179566_35384487|GENSCAN_predicted_peptide_4|659_aa
MVIIWLVVASWEWAKDILQSAREFPLVHLPPTQEPMAANRQCCAIKVFVKKLSWALWAIL
RALFRLANWLKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEWMK
KPRCGVPDHPHLSRRRRNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAFDVW
QKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD
THFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHNFKLP
QDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPSERKHERQPRPPRPPLGDRPSTPGT
KPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDAAYER
ADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFFKGER
YWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGCTACALLFTLPQSRCRKCLGVV
MLGCISADYTYFYKGRDYWKFDNQKLSVEPGYPRNILRDWMGCNQKEVERRKERRLPQDD
VDIMVTINDVPGSVNAVAVVIPCILSLCILVLVYTIFQFKNKTGPQPVTYYKRPVQEWV

>gi568815578r:35179566_35384487|GENSCAN_predicted_CDS_4|1980_bp
atggtgatcatctggcttgtggtggcctcctgggagtgggccaaggacattctgcagagc
gccagggaattcccgctagtgcacttaccacccactcaagagccgatggcagccaacagg
caatgctgcgccattaaggtgtttgtcaagaagctaagctgggcattgtgggcgatcctg
agggccctttttagattggctaactggttaaagtcctatggctatctgcttccctatgac
tcacgggcatctgcgctgcactcagcgaaggccttgcagtcggcagtctccactatgcag
cagttttacgggatcccggtcaccggtgtgttggatcagacaacgatcgagtggatgaag
aaaccccgatgtggtgtccctgatcacccccacttaagccgtaggcggagaaacaagcgc
tatgccctgactggacagaagtggaggcaaaaacacatcacctacagcattcacaactat
accccaaaagtgggtgagctagacacgcggaaagctattcgccaggctttcgatgtgtgg
cagaaggtgaccccactgacctttgaagaggtgccataccatgagatcaaaagtgaccgg
aaggaggcagacatcatgatcttttttgcttctggtttccatggcgacagctccccattt
gatggagaagggggattcctggcccatgcctacttccctggcccagggattggaggagac
acccactttgactccgatgagccatggacgctaggaaatgccaaccatgacgggaacgac
ctcttcctggtggctgtgcatgagctgggccacgcgctgggactggagcactccagcgac
cccagcgccatcatggcgcccttctaccagtacatggagacgcacaacttcaagctgccc
caggacgatctccagggcatccagaagatctatggacccccagccgagcctctggagccc
acaaggccactccctacactccccgtccgcaggatccactcaccatcggagaggaaacac
gagcgccagcccaggccccctcggccgcccctcggggaccggccatccacaccaggcacc
aaacccaacatctgtgacggcaacttcaacacagtggccctcttccggggcgagatgttt
gtctttaaggatcgctggttctggcgtctgcgcaataaccgagtgcaggagggctacccc
atgcagatcgagcagttctggaagggcctgcctgcccgcatcgacgcagcctatgaaagg
gccgatgggagatttgtcttcttcaaaggtgacaagtattgggtgtttaaggaggtgacg
gtggagcctgggtacccccacagcctgggggagctgggcagctgtttgccccgtgaaggc
attgacacagctctgcgctgggaacctgtgggcaagacctactttttcaaaggcgagcgg
tactggcgctacagcgaggagcggcgggccacggaccctggctaccctaagcccatcacc
gtgtggaagggcatcccacaggctccccaaggagccttcatcagcaaggaaggatgtact
gcctgtgccctccttttcacactgccccagagcaggtgccggaagtgtctgggagtggtg
atgctgggctgtatttctgcagattacacctatttctacaagggccgggactactggaag
tttgacaaccagaaactgagcgtggagccaggctacccgcgcaacatcctgcgtgactgg
atgggctgcaaccagaaggaggtggagcggcggaaggagcggcggctgccccaggacgac
gtggacatcatggtgaccatcaacgatgtgccgggctccgtgaacgccgtggccgtggtc
atcccctgcatcctgtccctctgcatcctggtgctggtctacaccatcttccagttcaag
aacaagacaggccctcagcctgtcacctactataagcggccagtccaggaatgggtgtga

>gi568815578r:35179566_35384487|GENSCAN_predicted_peptide_5|333_aa
MAVRASFENNCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIG
RMCVGNRHGLLVPNNTTDQELQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVALVHPD
LDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVP
LVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSMRDSL
IDRVRSVRGGGVTAPAPPDAETMGAQLSGGRGAPEPAQTQPQPQPQPAAPEGPEQPRHPP
QPQPQPQPQPQPEPSPWGPLDDVRFLIACTSWY

>gi568815578r:35179566_35384487|GENSCAN_predicted_CDS_5|1002_bp
atggcggtccgagcttcgttcgagaacaactgtgagatcggctgctttgccaagctcacc
aacacctactgtctggtagcgatcggaggctcagagaacttctacagtgtgttcgagggc
gagctctccgataccatccccgtggtgcacgcgtctatcgccggctgccgcatcatcggg
cgcatgtgtgtggggaacaggcacggtctcctggtacccaacaataccaccgaccaggag
ctgcaacacattcgcaacagcctcccagacacagtgcagattaggcgggtggaggagcgg
ctctcagccttgggcaatgtcaccacctgcaatgactacgtggccttggtccacccagac
ttggacagggagacagaagaaattctggcagatgtgctcaaggtggaagtcttcagacag
acagtggccgaccaggtgctagtaggaagctactgtgtcttcagcaatcagggagggctg
gtgcatcccaagacttcaattgaagaccaggatgagctgtcctctcttcttcaagtcccc
cttgtggcggggactgtgaaccgaggcagtgaggtgattgctgctgggatggtggtgaat
gactggtgtgccttctgtggcctggacacaaccagcacagagctgtcagtggtggagagt
gtcttcaagctgaatgaagcccagcctagcaccattgccaccagcatgcgggattccctc
attgacagggtgaggtcggtacgcggtggtggcgtcacggcgccagctcctcccgacgcc
gagaccatgggggctcagctaagcggcggccgcggcgccccggagcctgcgcaaacccag
ccccagccccagccccagcctgcggcgccggagggcccggaacagccccggcatccgccc
cagccccagccccagccccagccccagccccagcccgagcccagcccgtgggggccgctg
gacgacgtgcgcttcctcatcgcctgcacttcctggtactga

>gi568815578r:35179566_35384487|GENSCAN_predicted_peptide_6|747_aa
MFGGPGPGVLGAQGMAGPLRGRVEELKLPWWRESSPLVLRHSEAARLAADALLERGEAAY
LRVISEERELPFLSALDVDYMTSHVRGGPELSEAQGQEASGPDRLSLLSEVTSGTYFPMA
SDIDPPDLDLGWPEVPQATGFSPTQAVVHFQRDKAKNIKDLLRFLFSQAHTVVAVVMDIF
TDMELLCDLMEASSRRGVPVYLLLAQEHLRHFLEMCYKMDLNGEHLPNMRVRSTCGDTYC
SKAGRRFTGQALEKFVLIDCEQVVAGSYSFTWLCSQAHTSMVLQLRGRIVEDFDREFRCL
YAESQPVEGFCGGEDPLSPRALRPPPVALAFRPDVPSPTSSLPSSTSLSSIKQSPLMGRS
SYLALPGGGDCSDTGVVSSSLGPARREASGQPSLHRQLSDPNHGSPPGLYRANLGKLGAY
PWSQSSPALNHNSTSPLTLAVGSPLLPRSRPLLQFHRGAPALSRFPENGLPGSQEPSPLR
GRWVPGTTLETVEEKEKKASPSQSRGQLDLLVPFPRAREVGDPDSGVTPNSGPLRPGEQA
PEDRRLSPSQADSQLDLLSRALGTGGAPELGSLRPGDRALEDRRLSLNQSRGQSDLLMQY
PKAQGSRVPLETNSSARPARRAPDERRQTLGHSQLDLITKFGPFRGEGPGPNGLPISSPA
RTAGAGSGDEKRLTLGHSKLDLITKYHQLHGARQGTEPGGPKGGHLNGGNSDLVRDEKRL
TLGHSKLDLITKYNKSKFKQLRSRFES

>gi568815578r:35179566_35384487|GENSCAN_predicted_CDS_6|2244_bp
atgttcggaggcccggggcctggggtcctgggagcccagggcatggcgggacccctgcgg
ggccgggtggaagagctgaagctgccgtggtggcgggagagctcaccgctggtgctgcgg
cacagcgaggcggctcggctggcggccgacgccctcctggagcggggtgaggctgcctac
ctgcgggtcatctccgaggagcgggagctgcccttcctgagcgccctggatgtggactac
atgaccagccatgtgcgcgggggccctgagctcagcgaggctcaggggcaggaggcctcc
gggccagaccgcctcagcctgctctctgaagtcacctcagggacttacttccccatggcc
tctgacatagaccccccagacctggacctgggctggcccgaggtgccacaggccacaggc
ttcagccccacccaggctgtggtccacttccagagggacaaggccaagaacatcaaggac
ctgctgcgcttccttttcagccaggcccacacggtggtggctgtggtgatggacatattc
actgacatggagcttctgtgtgacctcatggaggcctcaagccggcgtggtgtccctgtg
tacctgctccttgcccaggagcacctgaggcacttcctggagatgtgctacaagatggac
ctcaatggggagcacctgccgaacatgcgtgtgcggagcacgtgtggggacacatactgc
agcaaggctggccgccgcttcacggggcaggccctggagaagttcgtcctcattgactgt
gagcaagtggtggcgggcagttacagcttcacctggctttgcagccaggcccacactagc
atggtgctgcagctgaggggccgcatcgtggaagactttgaccgggagttccgctgtctg
tacgctgagtcgcagcctgtggagggcttctgtggcggtgaggacccgctgtctccccgg
gcactgcgtcctccccctgtggccctagccttcaggcctgatgtcccaagccccacgtcg
tccctgccctccagcaccagcctcagcagcatcaagcagtcaccgcttatgggtcgctcc
tcctacctcgctctaccaggaggtggtgattgcagtgatacgggtgtggtgtcctcgtcc
ctgggtcctgcccgccgtgaggccagtggccagccctccctacatcgccaactgtcagac
cctaaccacggctcccctcctgggctctatagggccaatctcggcaagctaggggcatac
ccatggtcccagtcctcccctgccctcaaccataatagtaccagccccttaaccttggca
gtggggtcacctctgcttcctcgctcccggcccctcctccagttccatcggggtgcccca
gctctgtcccggttcccagagaatgggctcccaggaagccaagagcccagccccctgcgg
ggtcgatgggtacctggcacaaccctggagacagtggaggagaaggagaagaaggcatct
ccaagtcagagccgtggccagctggatctccttgtccccttccccagagcccgagaagtg
ggagaccctgactctggggttacccccaactcaggcccccttcggcctggcgagcaggcc
ccagaggacaggaggttgtccccaagccaggccgacagccagctggatctcctgtcccga
gccctgggtactgggggtgcccctgagttgggttccctcagacctggtgatcgggccctg
gaggacaggaggctgtccctaaaccaaagccgtggccaatcagacctcctgatgcagtac
cccaaggcccagggttccagagtgccccttgaaaccaactcctcagccagacctgccaga
cgggcaccagatgagcggcggcagaccctggggcacagccagctggacctcatcacaaag
ttcggcccattccgtggtgaggggcctgggcccaatggtctcccgatatcaagccctgct
cgcacggctggagctgggtctggggatgagaaacggctaaccctgggccacagcaagctg
gacctcatcaccaagtatcatcagttgcacggggccaggcagggaactgagcctgggggt
cccaagggtggccatctcaatggtggtaacagtgacctggtcagggatgagaaacggctg
accctgggtcacagcaaactggacctcatcactaagtacaacaagtccaagttcaagcag
ctccgaagccgctttgagtcctag

>gi568815578r:35179566_35384487|GENSCAN_predicted_peptide_7|179_aa
MERVLPGLATLRSWECPHITTEENQGAENLKDLAVAAIVFVAILLLLQRQKVFIVSCALG
PKRALTSSLKQVNPYILKKNMILMTNHFYAAILGYDEGILSDDHGLAAALWRTFFNRKCE
DPRHLELLVEYVRKQIQYLDSMNGEDLLLTGEVSWRPLVEKNPQSILKPHSPTYNDEGL

>gi568815578r:35179566_35384487|GENSCAN_predicted_CDS_7|540_bp
atggaacgagttctgcctggcctggccactcttcggagttgggagtgtccccatattaca
actgaggagaaccaaggagcagaaaacttaaaggacttggctgtggccgccatagtgttt
gtggctatactccttctccttcaaagacagaaggtgtttatcgtctcctgtgctttaggt
cccaagagagcccttaccagctccctcaagcaggttaatccctatatcctgaagaagaac
atgatcctcatgacaaatcatttctatgcagcgatcttgggatatgatgaggggatcctt
tcagatgatcatgggctggccgctgccctctggagaaccttcttcaaccggaaatgtgaa
gaccctcgacatcttgaattgctggtagagtatgtgaggaaacagatacagtacctggac
tccatgaacggggaggatctgcttctgacaggggaggtgagctggcgccctctagtggag
aagaatcctcagagcatcctgaagccccattctccgacttacaacgacgagggactttga

>gi568815578r:35179566_35384487|GENSCAN_predicted_peptide_8|183_aa
MPQGNAHWSILDFWIWDAQLKIKIAALRMYTSCVEKTDFEEFFLSCPVALMLPPEGLGFI
VREFGKPGGDSHVHSPGKGMCLVRMKQEGRSGKYMCRIIVHFMWEDVQQRGRVMGWVRGL
ADFKNEAADLHSKCYQLLKVVRTQRVSSSKIYGEDRKNKASTVWKGDLSGLPLLARGKVL
PVD

>gi568815578r:35179566_35384487|GENSCAN_predicted_CDS_8|552_bp
atgccccagggaaatgctcactggagcattttggatttttggatttgggatgctcagctg
aagattaagattgcggccctgcgcatgtatactagctgtgtggagaaaactgacttcgag
gaattctttctaagctgtcctgtggccctcatgctccccccagaagggttaggcttcata
gtgagggagtttgggaaaccaggtggagatagccatgtacacagccctggaaaagggatg
tgtctagtccgaatgaagcaggaaggccggagtgggaagtacatgtgtcgtatcatagtt
cattttatgtgggaggatgttcagcagcgcggcagagtcatggggtgggttcgtggtctc
gctgacttcaagaatgaagccgcagaccttcacagcaagtgttaccagctcttaaaggtg
gtgcggacccaaagagtgagcagcagcaagatttatggtgaagaccgaaagaacaaagct
tccacagtgtggaagggggacctgagcgggttgccactgctggctaggggcaaagttctc
cctgtggactga