GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:56:10

Sequence gi568815586f:130772836_130975923 : 203088 bp : 45.73% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  10714  10874  161  1  2  118   78    52 0.501   6.83
 1.02 Term +  15213  15331  119  1  2  110   49    10 0.253  -2.00
 1.03 PlyA +  16199  16204    6                               1.05

 2.12 PlyA -  16787  16782    6                               1.05
 2.11 Term -  20128  20066   63  1  0  112   55     2 0.198  -2.81
 2.10 Intr -  25800  25690  111  0  0   67   96    62 0.945   5.48
 2.09 Intr -  28455  28318  138  0  0   58   68   207 0.998  16.36
 2.08 Intr -  28653  28580   74  1  2   40   86    95 0.988   3.63
 2.07 Intr -  33855  33676  180  1  0   84   81    14 0.433   0.14
 2.06 Intr -  34255  34147  109  1  1   35   78   211 0.993  14.66
 2.05 Intr -  35869  35796   74  2  2   58   41   125 0.059   3.93
 2.04 Intr -  40196  40122   75  0  0   50  110    92 0.244   7.09
 2.03 Intr -  48953  48854  100  2  1  133  100    53 0.924  10.68
 2.02 Intr -  54432  54358   75  0  0   70  110    81 0.777   8.21
 2.01 Init -  57485  57390   96  2  0   68   61    56 0.292  -0.64
 2.00 Prom -  58007  57968   40                              -6.06

 3.00 Prom +  61910  61949   40                              -5.26
 3.01 Init +  65461  65582  122  0  2   87   68    35 0.929   1.06
 3.02 Intr +  66112  66243  132  1  0   47   41   203 0.792  11.26
 3.03 Intr +  79851  80032  182  0  2   51   71   138 0.725   7.91
 3.04 Intr +  80071  80271  201  2  0   47  110    61 0.693   3.46
 3.05 Term +  82810  82919  110  2  2   27   35    81 0.266  -4.63
 3.06 PlyA +  83399  83404    6                               1.05

 4.00 Prom +  95948  95987   40                              -5.26
 4.01 Init +  99699  99794   96  2  0  114   56   163 0.843  14.01
 4.02 Intr + 100001 100085   85  1  1   43   77   148 0.986   8.59
 4.03 Intr + 100168 100293  126  2  0   96  102    64 0.970   9.25
 4.04 Intr + 101711 101898  188  0  2   41   89   201 0.999  14.91
 4.05 Intr + 102777 102947  171  2  0   62   57   210 0.999  15.44
 4.06 Term + 103047 103091   45  2  0   98   54    79 0.998   2.71
 4.07 PlyA + 103421 103426    6                               1.05

 5.03 PlyA - 103588 103583    6                               1.05
 5.02 Term - 106793 106653  141  2  0  110   42    47 0.485   0.23
 5.01 Init - 109979 109788  192  2  0   74   78   116 0.242   8.17
 5.00 Prom - 111642 111603   40                              -6.76

 6.03 PlyA - 112979 112974    6                               1.05
 6.02 Term - 115079 114549  531  2  0   -8   36   840 0.938  63.45
 6.01 Init - 123113 123033   81  2  0   61   49    53 0.160  -2.29
 6.00 Prom - 124664 124625   40                              -5.16

 7.00 Prom + 124938 124977   40                              -4.86
 7.01 Init + 127574 127725  152  1  2   66   37   173 0.543   9.51
 7.02 Term + 130002 130071   70  0  1   87   48    67 0.516   0.01
 7.03 PlyA + 131294 131299    6                               1.05

 8.03 PlyA - 131533 131528    6                               1.05
 8.02 Term - 132321 131804  518  1  2   45   48   262 0.229  12.38
 8.01 Init - 135563 135485   79  2  1   77   34    27 0.103  -2.58
 8.00 Prom - 140700 140661   40                              -3.76

 9.02 PlyA - 141230 141225    6                               1.05
 9.01 Sngl - 147012 146398  615  0  0   76   33   538 0.602  43.30
 9.00 Prom - 153756 153717   40                              -5.46

10.00 Prom + 162943 162982   40                              -4.86
10.01 Init + 176131 176205   75  0  0   58   82    85 0.282   5.26
10.02 Intr + 181583 181696  114  1  0   18   95    78 0.075   2.14
10.03 Intr + 181789 181825   37  0  1   99  110     4 0.892   1.54
10.04 Intr + 193628 193711   84  0  0   92   65    69 0.250   4.79
10.05 Intr + 196142 196237   96  0  0   76   71    32 0.231   0.28
10.06 Intr + 198623 198745  123  0  0  108  113   145 0.837  19.56
10.07 Intr + 202264 202396  133  2  1   41  109    58 0.155   2.90

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 181631 181696   66  1  0   81   95    61 0.853   7.39


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:130772836_130975923|GENSCAN_predicted_peptide_1|93_aa
XASGIRAQMRGGCGPQAWHLGTKQEEAEGGGKGDTDREEQAHAYSLIDHGGTGESRELRS
QEAQVTPPKEAGPPLHSLEPLPAKKPEALFSQA

>gi568815586f:130772836_130975923|GENSCAN_predicted_CDS_1|282_bp
nnagcctcaggaatccgagcgcagatgaggggtggatgcggccctcaggcctggcacctg
ggcacaaagcaagaggaggctgagggtggcgggaaaggggatacagatagagaagaacag
gctcacgcctactccctcatcgaccatgggggtacaggagaaagcagggaactgaggtcc
caggaggcccaggtcaccccacccaaggaggcagggcctcccctgcactctctggaacct
ctccctgccaagaagccagaggccctgttttctcaggcttag

>gi568815586f:130772836_130975923|GENSCAN_predicted_peptide_2|364_aa
MGRSPWESSLLSQGSVALGSIEMGAASFLELQCRKNDDGDTVVVVEKDHFMDDFFHQVEE
IRNSIDKITQYVEEVKKNHSIILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQS
FDQDESGNRTSVDLRIRRTQHSVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEIIPPC
PGSGASSWLLTSLLVCEQRQRPYCPRLFSGVSMGTVGCGSGDGAFFGDRRVCFRDKAGRT
TTDDELEEMLESGKPSIFTSDIISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDM
AMFVETQGEMINNIERNVMNATDYVEHAKEETKKAIKYQSKARRTSFLEETPFIKPKVVS
LCLV

>gi568815586f:130772836_130975923|GENSCAN_predicted_CDS_2|1095_bp
atgggacggtcaccatgggaaagcagcttgctttcacagggaagcgtggcgctggggagc
attgagatgggtgcagcctctttcctggagctgcagtgtaggaagaatgatgatggagac
acagttgttgtggttgagaaagatcatttcatggatgatttcttccatcaggtggaggag
attagaaacagtattgataaaataactcaatatgttgaagaagtaaagaaaaaccacagc
atcattctttctgcaccaaacccggaaggaaaaataaaagaagagcttgaagatctgaac
aaagaaatcaagaaaactgcgaataaaattcgagccaagttaaaggctattgaacaaagt
tttgatcaggatgagagtgggaaccggacttcagtggatcttcggatacgaagaacccag
cattcggtgctgtctcggaagtttgtggaagccatggcggagtacaatgaggcacagact
ctgtttcgggagcggagcaaaggccgcatccagcgccagctggagataatcccgccctgc
cctggttcgggggcatcttcatggctcctcacatctctccttgtctgtgagcagaggcag
cggccctattgccccagactcttttcaggggtgtctatggggacagttggctgtggcagt
ggagatggcgccttcttcggggacagacgggtctgtttcagggataaagctgggagaacc
accacagacgacgagctagaagagatgctggagagcgggaagccatccatcttcacttcc
gacattatatcagattcacaaattactagacaagctctcaatgaaatcgagtcacgtcac
aaggacatcatgaagctggagaccagcatccgagagttgcatgagatgttcatggacatg
gctatgtttgtggagactcagggtgaaatgatcaacaacatagaaagaaatgttatgaat
gccacagactatgtagaacacgctaaagaagaaacaaaaaaagctatcaaatatcagagc
aaggcaagaaggacaagcttcctggaggagactccatttattaagccaaaggtggtctcg
ctttgccttgtgtga

>gi568815586f:130772836_130975923|GENSCAN_predicted_peptide_3|248_aa
MHSPVTFTRVECIEILPKFLVTCFSLAKVNSNLLCARLLGATPEIPALGTLPEPRPRRPE
PPPALQTPPRPGLNRYPRLPLTAVRPIRLKIATPFELLYAQHFRQETRRLFYPSNPVSSS
PDPSRVSNGSIPFCPELPGIGPDPTDANHRSGPPVRLTDWPLIEGSYSPSLLKFDNLLEC
VTEHREVLYLLLLLYYKGFNSGTATKKRCTGPGAVGEVTNFVTPHPQLCDQGSQQLLGKD
VKQSEVIL

>gi568815586f:130772836_130975923|GENSCAN_predicted_CDS_3|747_bp
atgcacagtcctgtcacctttacacgtgtagaatgcatcgaaatccttccaaaattttta
gtgacctgcttttcccttgctaaagtaaacagtaacttgctgtgtgcccggctgctgggc
gcaacgccggagatccccgccctggggaccctcccggagccccgcccaagacgccccgag
cccccgcccgccctccagacgccgccccggccgggcctgaaccgctacccgcggctgccg
ctcaccgccgtcagacccatccggttaaaaattgccaccccctttgaactgctctatgca
cagcacttcagacaagagactcgcaggcttttctaccccagcaacccagtctccagctct
ccagaccccagcagagtgtccaacggttccattccattctgccctgaactacctggaatt
ggtccagaccccacagatgccaatcacagatcggggcctccagtgcgtctgactgactgg
ccattaatagaaggctcctacagcccctccctcctcaagtttgataatttgctagaatgc
gtcacagaacacagggaagtgctttacttactattactactttattacaaaggcttcaac
tcaggaacagccacaaagaagaggtgcacagggccaggagcagttggggaagttacaaat
tttgtgacaccccacccccagttatgtgaccagggcagtcagcaacttctaggaaaagac
gtcaagcagtcggaggtcatcctttaa

>gi568815586f:130772836_130975923|GENSCAN_predicted_peptide_4|236_aa
MGCGAARALASVLCLRRNAAMAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYV
ATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKN
VPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKP
FLWLARKLIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL

>gi568815586f:130772836_130975923|GENSCAN_predicted_CDS_4|711_bp
atgggctgcggggccgcgcgagcgctcgcctccgtcctctgcctccgcaggaacgccgcg
atggctgcgcagggagagccccaggtccagttcaaacttgtattggttggtgatggtggt
actggaaaaacgaccttcgtgaaacgtcatttgactggtgaatttgagaagaagtatgta
gccaccttgggtgttgaggttcatcccctagtgttccacaccaacagaggacctattaag
ttcaatgtatgggacacagccggccaggagaaattcggtggactgagagatggctattat
atccaagcccagtgtgccatcataatgtttgatgtaacatcgagagttacttacaagaat
gtgcctaactggcatagagatctggtacgagtgtgtgaaaacatccccattgtgttgtgt
ggcaacaaagtggatattaaggacaggaaagtgaaggcgaaatccattgtcttccaccga
aagaagaatcttcagtactacgacatttctgccaaaagtaactacaactttgaaaagccc
ttcctctggcttgctaggaagctcattggagaccctaacttggaatttgttgccatgcct
gctctcgccccaccagaagttgtcatggacccagctttggcagcacagtatgagcacgac
ttagaggttgctcagacaactgctctcccggatgaggatgatgacctgtga

>gi568815586f:130772836_130975923|GENSCAN_predicted_peptide_5|110_aa
METTQIHRRRRSSQEYLEVTSVMPATQIHSDGGGALSRKYLEVRSVMETTQIHRQRRSSQ
EYLEGRFPLRVFPGLHCPPSQASDQAPAMLPKPQLSVLTLTVALSLIPGT

>gi568815586f:130772836_130975923|GENSCAN_predicted_CDS_5|333_bp
atggagaccacgcagatccacagacggaggaggagttctcaggagtacctagaggtgaca
tcagtgatgccggctacgcagatccacagtgacggaggaggcgctctctctcggaaatac
ctagaggtgagatcagtgatggagaccacgcagatccacagacagaggaggagttctcag
gagtacctagaggggcgcttccccctgagggtctttcctggactccactgccctccttct
caggcctcagaccaggcccctgcgatgctcccaaagcctcagctgtccgtcctcacactc
actgtggcgctcagcctcatcccaggaacctga

>gi568815586f:130772836_130975923|GENSCAN_predicted_peptide_6|203_aa
MLPPMSTVGPALLSPCSNPRLLDTKFQSPVTLTVTYYARHTSLSRSPVTLTVTYYARHTS
LSRSPVTLTVTYYARHTSLSRSPVTLTVTYYARHTSLSRSPVTLTVTYYARHTSLSRSPV
TLTVTYYARHTSLSRSPVTLTVTYYARHTSLSRSPVTLTVTYYARHTSLSRSPVTLTVTY
YARHTSLSRSHQIAIHFFSDPLL

>gi568815586f:130772836_130975923|GENSCAN_predicted_CDS_6|612_bp
atgttgcctccgatgagcaccgtcggccctgccctcctcagcccctgcagtaatcctcgg
ttgttagacacaaaattccagtcacccgtcaccctcacggtcacctactacgccagacac
acgtcactgtcacggtcacccgtcaccctcacggtcacctactacgccagacacacgtca
ctgtcacggtcacccgtcaccctcacggtcacctactacgccagacacacgtcactgtca
cggtcacccgtcaccctcacggtcacctactacgccagacacacgtcactgtcacggtca
cccgtcaccctcacggtcacctactacgccagacacacgtcactgtcacggtcacccgtc
accctcacggtcacctactacgccagacacacgtcactgtcacggtcacccgtcaccctc
acggtcacctactacgccagacacacgtcactgtcacggtcacccgtcaccctcacggtc
acctactacgccagacacacgtcactgtcacggtcacccgtcaccctcacggtcacctac
tacgccagacacacgtcactgtcacggtcacaccagatagcaatacattttttttctgat
cctctgctataa

>gi568815586f:130772836_130975923|GENSCAN_predicted_peptide_7|73_aa
MQGDTRDGRTPRKIPYEDTGKKAAVCKPRREPPGETRPADSLALNLQAPELQQGSILSVC
ATFNFSSPRSPGF

>gi568815586f:130772836_130975923|GENSCAN_predicted_CDS_7|222_bp
atgcaaggagataccagggatggacgaacaccgagaaaaataccctatgaggacacgggc
aagaaggcagccgtctgcaagccaaggagagagcccccaggagaaactcgccctgctgac
tccttggccttgaacctgcaagctccggaactgcagcagggctccattctgagcgtctgt
gctaccttcaacttctccagccctagatccccaggattctga

>gi568815586f:130772836_130975923|GENSCAN_predicted_peptide_8|198_aa
MLQPEYWHSPQNSSVEILTPKMMVSGARAQAAGSQSPCGSARAQAAGSQIPGGSARAQAA
GSQSPCGSARAQAAGSQIPGGSARAQAAGSQSPGGSARAQAAGSQIPGGSARAQAAGSQI
PGGSARAQAAGSQSPGGSARAQAAGSQSPCGSARAQAAGSQIPCGSARAQVAGSQSLCGS
ACVMPPRLGFTPEPDNGH

>gi568815586f:130772836_130975923|GENSCAN_predicted_CDS_8|597_bp
atgctacagcctgaatattggcattccccccaaaattcatctgttgaaatcctgaccccc
aagatgatggtatcaggagcccgtgcccaggcggccggctcccagagcccatgtggatca
gcccgtgcccaggcggccggctcccagatcccgggtggttcagcccgtgcccaggcggcc
ggctcccagagcccatgtggatcagcccgtgcccaggcggccggctcccagatcccgggt
ggttcagcccgtgcccaggcggccggctcccagagcccgggtggttcagcccgtgcccag
gcggccggctcccagatcccgggtggttcagcccgtgcccaggcggccggctcccagatc
ccgggtggttcagcccgtgcccaggcggccggctcccagagcccgggtggttcagcccgt
gcccaggcggccggctcccagagcccatgtggatcagcccgtgcccaggcggccggctcc
cagatcccgtgtggttcagcccgtgcccaggtggccggctcccaaagcctctgtggctca
gcctgtgtgatgccaccgcgcctgggctttacaccagaacctgacaatggtcattga

>gi568815586f:130772836_130975923|GENSCAN_predicted_peptide_9|204_aa
MGEYDSNMEKYDFNMGEYDFNMEKYDFNMEEYDFNIGKYDFNMGEYDFNMGKYDFNMGKY
DFNMGKYDLNIGKYDFNMRECDFNVRKYDLNMGKYDFIMEYDFSMREYDLNMGKYDFNMR
EYDLNMGKYDFNLGEYDFNMGKYDFNMEKYDLNIGKYDFNMRECDFNVRKYDLNMGKYDF
IMEYDFSIREYDLNMGKYDFNMGK

>gi568815586f:130772836_130975923|GENSCAN_predicted_CDS_9|615_bp
atgggagaatatgattccaacatggagaaatatgacttcaacatgggggaatatgatttc
aacatggagaaatatgacttcaacatggaggaatatgatttcaacatagggaaatatgac
ttcaacatgggggaatatgatttcaacatggggaaatatgatttcaacatggggaaatat
gatttcaacatggggaaatatgatttaaacatagggaaatatgatttcaacatgagggaa
tgtgatttcaatgtgaggaaatatgatttaaacatggggaagtatgatttcatcatggaa
tatgatttcagcatgagggaatatgatttaaacatggggaaatatgatttcaacatgagg
gaatatgatttaaacatggggaaatatgacttcaacctgggggaatatgatttcaacatg
gggaaatatgatttcaacatggagaaatatgatttaaacatagggaaatatgatttcaac
atgagggaatgtgatttcaacgtgaggaaatatgatttaaacatggggaagtatgatttc
atcatggaatatgatttcagcataagggaatatgatttaaatatggggaaatatgatttc
aacatggggaagtag

>gi568815586f:130772836_130975923|GENSCAN_predicted_peptide_10|221_aa
MLWLLRASPSGATLVEASVKLIILLTLRNFTWLRALTSERAMEKLLRLCCWYSWLLLFYY
NFQVRGVYSRSQDHPGFQVLASASHYWPLENVDGIHELQDTTGASRTHKLTVLPSRNATF
VYSNDSAYSNLSATVDIVEGKVNKGIYLKEEKGVTLLYYGRYNSSCISKPEQCGPEVSTQ
VGKLKIGRGTCWNVLAPSFTYLETLKAQLKCKLYGDELQSS

>gi568815586f:130772836_130975923|GENSCAN_predicted_CDS_10|663_bp
atgctctggcttctgagggcatcgccatcaggagcaacgctggtggaagccagtgtgaag
ctgatcatcctactgaccctcaggaatttcacttggctccgagctttgacctccgagaga
gccatggaaaagctgctgcggctgtgctgctggtactcctggctgctgctattttattac
aactttcaggtgcgtggcgtctactccagatcgcaggaccatccaggatttcaggtgttg
gcgtctgcttcccattactggccactggagaatgtggatgggatccatgaacttcaggat
acaactggagcgtcccgaacccacaagctcactgtgcttccttcccgtaatgctactttt
gtgtattccaatgattctgcctactcaaatctctctgcaactgtagatattgtggaaggg
aaggtcaacaaaggcatttacctgaaagaggaaaagggagtcacgcttctctattacggc
aggtacaacagctcctgcatcagcaagccagagcagtgtggccctgaagtgagcacacag
gtggggaagctgaaaataggaaggggcacttgctggaatgttctggcaccttctttcacc
tacctggagaccttgaaggctcagctcaagtgtaaactttacggggatgagctccagtcc
agn