GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:55:22

Sequence gi568815591r:88108507_88320026 : 211520 bp : 37.40% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6049   6141   93  0  0   77  108    36 0.513   4.93
 1.02 Intr +  20096  20170   75  1  0   99   58   151 0.896  11.99
 1.03 Intr +  21882  21953   72  2  0   96   83    46 0.826   3.58
 1.04 Intr +  25823  25913   91  1  1   90  103    21 0.718   2.45
 1.05 Intr +  27474  27525   52  1  1   69   80    28 0.680  -2.85
 1.06 Intr +  34520  34619  100  2  1   97   85    70 0.828   6.79
 1.07 Intr +  36619  36690   72  0  0   93   97   102 0.967  10.28
 1.08 Intr +  36909  37001   93  2  0   66   94    29 0.592   0.54
 1.09 Intr +  40471  40551   81  0  0   85   91    99 0.859   8.82
 1.10 Intr +  42475  42525   51  0  0   83   96    17 0.526   0.19
 1.11 Intr +  42695  42814  120  1  0   52  106    75 0.600   5.47
 1.12 Intr +  44717  44820  104  1  2   26   89    65 0.109  -1.55
 1.13 Intr +  54506  54674  169  2  1   71   83    99 0.281   6.73
 1.14 Intr +  59062  59227  166  0  1   96   64    50 0.242   2.01
 1.15 Intr +  59631  59721   91  1  1  132   97     3 0.081   3.73
 1.16 Intr +  84610  84733  124  1  1   70   75   112 0.027   7.77
 1.17 Term +  88900  89046  147  0  0   51   53    83 0.044  -1.98
 1.18 PlyA +  90006  90011    6                               1.05

 2.07 PlyA -  90096  90091    6                               1.05
 2.06 Term -  91085  90972  114  2  0   87   49    81 0.682   1.69
 2.05 Intr - 100059 100001   59  1  2   88   95    87 0.779   7.08
 2.04 Intr - 100946 100833  114  0  0  101  109   162 0.999  19.10
 2.03 Intr - 108685 108616   70  1  1   59  111    92 0.910   6.44
 2.02 Intr - 110502 110353  150  0  0   -1   71   184 0.628   7.24
 2.01 Init - 111520 111470   51  1  0   94   98    46 0.970   7.45
 2.00 Prom - 113667 113628   40                              -3.65

 3.08 PlyA - 115118 115113    6                               1.05
 3.07 Term - 163617 163471  147  0  0   60   47   100 0.403   0.02
 3.06 Intr - 174662 174135  528  2  0   34   99   378 0.980  25.70
 3.05 Intr - 175765 175308  458  2  2   60  110   282 0.004  19.61
 3.04 Intr - 198658 198286  373  1  1   92   94   256 0.317  20.31
 3.03 Intr - 200293 200168  126  1  0   23   44   129 0.645   1.96
 3.02 Intr - 202792 202592  201  1  0   68   51    73 0.216   0.16
 3.01 Init - 205164 205099   66  0  0   51   64   109 0.639   5.92
 3.00 Prom - 209903 209864   40                              -2.55


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 101606 101477  130  2  1   92   69    86 0.855   7.46


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:88108507_88320026|GENSCAN_predicted_peptide_1|566_aa
MPNYFFVVGSGMFYDGNHTYLIEPEENDTTQLRRYPRNVEEETKYIELMIVNDHLMFKKH
RLSVVHTNTYAKSVVNMADLFGKTDLMAVTLAQSLAHNIGIISDKRKLASGECKCEDTWS
GCIMGDTGYYLPKKFTQCNIEEYHDFLNSGGGACLFNKPSKLLDPPECGNGFIETGEECD
CGTPAECVLEGAECCKKCTLTQDSQCSDGLCCKKCKFQPMGTVCREAVNDCDIRETCSGN
SSQCAPNIHKMDGYSCDGVQLSDISRYCIANGYLLFRFREFALEEDAKPEIDNANTFGGK
VTASDKYCYEKLNIEGTEKGNCGKDKDTWIQCNKRGGHVKLEEDVDLGYVEDGTPCGPQM
MCLEHRCLPVASFNFSTCLSSKEGTICSGNGNATAIIAQTGNYKPSVSITYITWAVITEV
CGHVFSLKKLVFTLRETKYNTHKTESSVAGTNIIIGIIAGTILVLALILGITAWGYKTLS
PAKSPSSSTGSIASSRKYPYPMPPLPDEDKKVNRQSARFADAGAHSAADGLLPGNHLSHP
SIPSHPSEPAPQQCVLLRLSKCTKDT

>gi568815591r:88108507_88320026|GENSCAN_predicted_CDS_1|1701_bp
atgcctaattatttttttgtcgttggcagtgggatgttctatgacgggaaccacacatat
ctcattgagccagaagaaaatgacactactcaacttcgtcgatatcctcgtaatgtagaa
gaagaaaccaaatacattgaactgatgattgtgaatgatcaccttatgtttaaaaaacat
cggctttccgttgtacataccaatacctatgcgaaatctgtggtgaacatggcagattta
tttgggaaaactgatttaatggctgttacacttgcccagtcattagcccataatattggt
attatctcagacaaaagaaagttagcaagtggtgaatgtaaatgcgaggacacgtggtcc
gggtgcataatgggagacactggctattatcttcctaaaaagttcacccagtgtaatatt
gaagagtatcatgacttcctgaatagtggaggtggtgcctgccttttcaacaaaccttct
aagcttcttgatcctcctgagtgtggcaatggcttcattgaaactggagaggagtgtgat
tgtggaaccccggccgaatgtgtccttgaaggagcagagtgttgtaagaaatgcaccttg
actcaagactctcaatgcagtgacggtctttgctgtaaaaagtgcaagtttcagcctatg
ggcactgtgtgccgagaagcagtaaatgattgtgatattcgtgaaacgtgctcaggaaat
tcaagccagtgtgcccctaatattcataaaatggatggatattcatgtgatggtgttcag
ttatctgacataagcagatattgcatcgctaatgggtatttgcttttccgttttagggaa
tttgctttggaggaagatgcaaaaccagagatagacaatgcaaatacatttgggggcaaa
gtgacagcatcagacaaatattgctatgagaaactgaatattgaagggacggagaagggt
aactgtgggaaagacaaagacacatggatacagtgcaacaaacgtggtgggcatgttaag
cttgaagaagatgtagatcttggctatgtggaagatgggacaccttgtggtccccaaatg
atgtgcttagaacacaggtgtcttcctgtggcttctttcaactttagtacttgcttgagc
agtaaagaaggcactatttgctcaggaaatggaaatgccacagccatcattgcccagacg
gggaattacaagcccagtgtttctatcacctacatcacctgggcagtaatcacagaagtc
tgtggacatgttttctcccttaagaagcttgtattcactttgagagagacaaaatataac
acacacaaaaccgagagcagtgttgctggcaccaatatcataataggcataattgctggc
accattttagtgctggccctcatattaggaataactgcgtggggttataagactttatct
cctgccaagtctccttcttcatcaactgggtctattgcctccagcagaaaatacccttac
ccaatgcctccacttcctgatgaggacaagaaagtgaaccgacaaagtgccaggtttgct
gatgcaggagcccactctgctgccgatgggctgctccctggaaatcatctatcccatccg
tccatcccatctcatcccagtgagccagcccctcagcagtgtgtgctgctgagattaagc
aagtgcaccaaagacacatga

>gi568815591r:88108507_88320026|GENSCAN_predicted_peptide_2|185_aa
MAYPGHPGAGGGYYPGGPSVVKEENLIRQNDVYVFPVSQYGGAPGGPAFPGQTQDPLYGY
FAAVAGQDGQIDADELQRCLTQSGIAGGYKRFRLSPQAVNSIAKRYSTNGKITFDDYIAC
CVKLRALTDSFRRRDTAQQGVVNFPYDDIACALGIISSLQRSEDHATSHLNKEWLEDSSC
GQSTP

>gi568815591r:88108507_88320026|GENSCAN_predicted_CDS_2|558_bp
atggcgtacccggggcatcctggcgccggcggcgggtactacccaggcgggccctcagtg
gtgaaagaagaaaacttgattcggcagaatgacgtgtatgtgtttcctgtttcacagtat
ggaggggctcccggagggcctgcgtttcccggacaaactcaggatccgctgtatggttac
tttgctgctgtagctggacaggatgggcagatagatgctgatgaattgcagagatgtctg
acacagtctggcattgctggaggatacaaacgatttaggttgagtccccaggctgtgaat
tcaattgcaaaacgatacagcaccaatggaaagatcaccttcgacgactacatcgcctgc
tgcgtcaaactgagggctcttacagacagctttcgaagacgggatactgctcagcaaggt
gttgtgaatttcccatatgatgatattgcatgtgccctggggatcatttccagcctgcag
cgttcagaggaccatgccacttcccatctaaataaagagtggctggaggacagttcatgt
ggccagtccactccataa

>gi568815591r:88108507_88320026|GENSCAN_predicted_peptide_3|632_aa
MSESNECRGNNRQQSKGEQVKEWPLSQADFLLTVTQACFLAVRQPSVKSVLLPRLFQERF
LLAQLRSHAIIGPITVDKALCFEWPGLSQLTVKQPQEGLSADIPEKGIATTEDSSMHVTA
PEDLSVTKDIQERGIPRPLQTSITLGCTDAKGSGVTLKIPASRGSAAPSAAPQYRSSGPS
SCWDSQLELFQETSSFPLLLRNPADRPALLWLLIAARATSHSAELQARRNFPLPARPAAR
TVGAGRFLLGSASPSVMEKTCIDALPLTMNSSEKQETVCIFGTGDFGRSLGLKMLQCGYS
VVFGSRNPQKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTELTEVLNGKILVDI
SNNLKINQYPESNAEYLAHLVPGAHVVKAFNTISAWALQSGALDASRQVFVCGNDSKAKQ
RVMDIVRNLGLTPMDQGSLMAAKEIEKYPLQLFPMWRFPFYLSAVLCVFLFFYCVIRDVI
YPYVYEKKDNTFRMAISIPNRIFPITALTLLALVYLPGVIAAILQLYRGTKYRRFPDWLD
HWMLCRKQLGLVALGFAFLHVLYTLVIPIRYYVRWRLGNLTVTQGEKGPQAKRYQHSYHQ
LSACRGGRQEELVVGSANYNYYTNQLETIQRV

>gi568815591r:88108507_88320026|GENSCAN_predicted_CDS_3|1899_bp
atgtcggaaagtaatgagtgccgtggaaataacagacagcagagtaaaggggagcaagtg
aaggagtggcctctttctcaggctgactttctcctcacagtgacccaggcttgcttttta
gcagtccgacaaccctctgtaaagagtgtgctgcttcccaggttgttccaggaaagattc
ctattggcccaactcaggtcacatgccatcattggaccaatcactgtggacaaggctttg
tgctttgaatggccaggtctaagtcagttaactgtaaaacagcctcaggaaggtctttca
gcagatattccagaaaaaggcattgctaccacagaagacagctccatgcatgttactgcc
cctgaggacctttcagtaacaaaagacatacaggaaagggggattcctagacctctccaa
acctcaatcaccctgggatgcacagatgccaagggctcgggtgtaacccttaaaatcccc
gcttcccgggggtcagcggcaccatcagcagcaccgcagtatagaagttccggtccttcc
agctgctgggattctcagcttgaactcttccaggaaacaagttcttttccgcttctcttg
cgaaatccagcagaccgtcccgcccttctctggcttcttatagcagcgagagccacaagc
cacagcgctgagctgcaggcgcggcgaaacttccctctacccgcccggcccgcggcgcgc
accgttggcgctggacgcttcctccttggaagcgcctctccctcagttatggagaaaact
tgtatagatgcacttcctcttactatgaattcttcagaaaagcaagagactgtatgtatt
tttggaactggtgattttggaagatcactgggattgaaaatgctccagtgtggttattct
gttgtttttggaagtcgaaacccccagaagaccaccctactgcccagtggtgcagaagtc
ttgagctattcagaagcagccaagaagtctggcatcataatcatagcaatccacagagag
cattatgattttctcacagaattaactgaggttctcaatggaaaaatattggtagacatc
agcaacaacctcaaaatcaatcaatatccagaatctaatgcagagtaccttgctcatttg
gtgccaggagcccacgtggtaaaagcatttaacaccatctcagcctgggctctccagtca
ggagcactggatgcaagtcggcaggtgtttgtgtgtggaaatgacagcaaagccaagcaa
agagtgatggatattgttcgtaatcttggacttactccaatggatcaaggatcactcatg
gcagccaaagaaattgaaaagtaccccctgcagctatttccaatgtggaggttccccttc
tatttgtctgctgtgctgtgtgtcttcttgtttttctattgtgttataagagacgtaatc
tacccttatgtttatgaaaagaaagataatacatttcgtatggctatttccattccaaat
cgtatctttccaataacagcacttacactgcttgctttggtttacctccctggtgttatt
gctgccattctacaactgtaccgaggcacaaaataccgtcgattcccagactggcttgac
cactggatgctttgccgaaagcagcttggcttggtagctctgggatttgccttccttcat
gtcctctacacacttgtgattcctattcgatattatgtacgatggagattgggaaactta
accgttacccagggggaaaaaggcccacaggcaaagaggtaccagcattcataccaccag
ctttcagcttgtagaggtggccgccaagaggaactcgtagttggcagtgccaactacaac
tactacaccaaccagctggaaactatacaaagagtatga