GENSCAN 1.0 Date run: 4-Nov-116 Time: 10:45:59 Sequence gi568815597f:150050911_150259520 : 208610 bp : 42.41% C+G : Isochore 1 ( 0 - 43 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.01 Sngl + 2954 3373 420 1 0 79 52 363 0.649 27.85 1.02 PlyA + 5124 5129 6 1.05 2.00 Prom + 7166 7205 40 -6.85 2.01 Init + 16948 17040 93 0 0 107 113 100 0.995 14.83 2.02 Intr + 17720 17854 135 1 0 78 79 112 0.987 9.14 2.03 Intr + 21256 21316 61 0 1 105 78 14 0.961 -0.51 2.04 Intr + 25323 25402 80 1 2 66 97 117 0.990 8.75 2.05 Intr + 26759 26869 111 1 0 90 87 118 0.954 11.56 2.06 Intr + 30432 30566 135 2 0 52 51 195 0.642 12.04 2.07 Intr + 30974 31087 114 1 0 83 94 108 0.998 10.62 2.08 Intr + 31806 31973 168 2 0 76 82 149 0.854 12.32 2.09 Intr + 41027 41185 159 1 0 65 86 141 0.993 10.86 2.10 Intr + 41392 41499 108 0 0 80 75 102 0.987 7.66 2.11 Intr + 42617 42738 122 1 2 90 115 34 0.931 4.67 2.12 Intr + 59586 59717 132 0 0 94 93 87 0.744 8.64 2.13 Intr + 93809 94007 199 2 1 -13 68 109 0.000 -2.77 2.14 Intr + 100002 100148 147 2 0 81 90 182 0.999 17.21 2.15 Intr + 105156 105296 141 2 0 120 92 151 0.996 18.33 2.16 Intr + 106001 106105 105 1 0 82 55 116 0.985 7.19 2.17 Intr + 106475 106576 102 1 0 66 68 48 0.471 0.05 2.18 Term + 107909 108613 705 1 0 135 55 850 0.987 78.92 2.19 PlyA + 112207 112212 6 1.05 3.00 Prom + 113763 113802 40 -6.65 3.01 Init + 118157 118368 212 1 2 76 86 180 0.464 14.91 3.02 Intr + 122265 122394 130 0 1 47 48 65 0.059 -1.82 3.03 Intr + 122820 122904 85 2 1 82 115 69 0.123 7.47 3.04 Term + 138840 139021 182 1 2 52 47 200 0.524 9.09 3.05 PlyA + 139280 139285 6 1.05 4.02 PlyA - 139297 139292 6 1.05 4.01 Sngl - 148922 148629 294 2 0 53 37 279 0.924 14.75 4.00 Prom - 162344 162305 40 -6.65 5.08 PlyA - 163035 163030 6 1.05 5.07 Term - 169851 169781 71 1 2 50 36 194 0.995 7.52 5.06 Intr - 172330 172276 55 1 1 18 96 158 0.868 7.23 5.05 Intr - 175885 175698 188 2 2 48 68 448 0.993 37.29 5.04 Intr - 178327 178162 166 1 1 58 51 147 0.991 6.61 5.03 Intr - 179783 179661 123 2 0 25 119 75 0.942 4.16 5.02 Intr - 181016 180867 150 2 0 92 106 80 0.977 9.64 5.01 Init - 184876 184823 54 1 0 93 78 86 0.859 9.43 5.00 Prom - 200408 200369 40 -5.55 6.00 Prom + 204800 204839 40 -6.55 6.01 Sngl + 205485 206399 915 2 0 57 42 235 0.130 11.86 6.02 PlyA + 207401 207406 6 -0.45 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ S.001 Init + 99351 99377 27 2 0 79 100 37 0.806 3.71 Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815597f:150050911_150259520|GENSCAN_predicted_peptide_1|139_aa MEGEQVEKPDTKEKKPEVKKADAGGKVKKGNLKAKKPKNRKPHCSQNPVIVRGIGRYSPS AMYSRKATCKRKYSAVKSKVEKQKEKFPATITKPAGGGKNGGTQVVKLCKMPTYYLTEDV LSKLLSQGKKPFSQHMRKL >gi568815597f:150050911_150259520|GENSCAN_predicted_CDS_1|420_bp atggagggtgaacaagttgagaagccagatactaaagagaagaaacctgaagtcaagaag gctgatgctggtggcaaggtgaaaaagggtaacctcaaggctaagaagcccaagaacagg aagccccattgcagtcaaaatcctgtcattgtcagagggattggcagatattctccatct gctatgtattccagaaaggccacgtgcaagaggaagtactcagctgtgaaatccaaggtt gaaaagcaaaaggagaagtttcctgcaactattacaaaaccagctggtggtggcaagaac ggtggtacgcaggtggttaaactttgcaaaatgcctacatattatcttactgaagatgtg ctttcaaagctgttgagccaaggaaaaaaacccttcagtcagcacatgagaaaactgtga >gi568815597f:150050911_150259520|GENSCAN_predicted_peptide_2|938_aa MNVVFAVKQYISKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDSQNR EIMKHLKAICFLRPTKENVDYIIQELRRPKYTIYFIYFSNVISKSDVKSLAEADEQEVVA EVQQVITKEYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMVHELLGINNNRIDL SRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKKKPKEQQKLESIA DMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEVEQELACQNDHSSALQN IKRLLQNPKVTEFDAARLVMLYALHYERHSSNSLPGLMMDLRNKGVSEKYRKLVSAVVEY GGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPFLHETLDHLIKGRLKENLYPY LGPSTLRDRPQDIIVFVIGGATYEEALTVYNLNRTTPGVRIVLGGTTVHNTKRKFWLLDC TAEARRALKSHQGQRAEDETVVGGRAQLPLLSPLQVFPTKQRCWRAALGSVLVVRTHLQG PQDGNQQPAPPEKVGWVRKFCGKGIFREIWKNRYVVLKGDQLYISEKEVKDEKNIQEVFD LSDYEKCEELRKSKSRSKKNHSKFTLAHSKQPGNTAPNLIFLAVSPEEKESWINALNSAI TRAKNRILDEVTVEEDSYLAHPTRDRAKIQHSRRPPTRGHLMAVASTSTSDGMLTLDLIQ EEDPSPEEPTSCAESFRVDLDKSVAQLAGSRRRADSDRIQPSADRASSLSRPWEKTDKGA TYTPQAPKKLTPTEKGRCASLEEILSQRDAASARTLQLRAEEPPTPALPNPGQLSRIQDL VARKLEETQELLAEVQGLGDGKRKAKDPPRSPPDSESEQLLLETERLLGEASSNWSQAKR VLQEVRELRDLYRQMDLQTPDSHLRQTTPHSQYRKSLM >gi568815597f:150050911_150259520|GENSCAN_predicted_CDS_2|2817_bp atgaacgtggtttttgctgtgaagcagtacatttccaaaatgatagaggacagcgggcct ggtatgaaagtacttctcatggataaagagacgactggcatagtgagtatggtatacaca caatcggagattctacagaaggaagtgtacctctttgaacgcattgattctcaaaatcga gagatcatgaaacacctgaaggcaatttgttttcttcgacctacaaaggagaatgtggat tatattattcaggagctccgaagacccaaatacactatatatttcatttatttcagtaat gtgatcagcaagagtgacgtgaagtcattggctgaagctgatgaacaggaagttgtggct gaggttcagcaagtgataactaaagaatatgaactgtttgaattccgtcggacagaggtt cctccattgctccttattttagatcgctgtgatgatgccatcaccccattgctaaaccag tggacatatcaggccatggtccacgaactactaggcataaacaacaatcggattgatctt tccagagtgccgggaatcagtaaagacttaagagaagtggtcctatctgctgaaaatgat gaattctatgctaataatatgtacctgaactttgctgagattggtagcaatataaagaat ctcatggaagattttcagaagaagaaaccaaaagaacagcaaaaactagaatcaatagca gacatgaaggcgtttgttgagaattatccacagttcaagaaaatgtctgggactgtttca aagcatgtgacagtggttggagaactgtctcgattggtcagtgaacggaatctgctggag gtttcagaggttgagcaagaactggcctgtcaaaatgaccattctagtgctctccagaat ataaaaaggcttctgcagaaccccaaagtgacagagtttgatgctgcccgcctggtgatg ctttatgctttacattatgagcgacacagcagcaatagcctgccaggactaatgatggac ctcaggaataaaggtgtttctgagaagtatcgaaagctcgtgtctgcagttgttgaatat ggtggtaaacgagtcagaggaagtgacctcttcagccccaaagatgctgtggctatcacc aaacaattcctcaaaggactgaagggagtagaaaatgtatatacacagcatcaacctttc ctacatgaaaccctggatcatctcatcaaaggaaggcttaaggaaaacctatatccttat ttaggccccagcacactcagagacagacctcaggatatcattgtgtttgtaattggagga gccacctatgaagaggctctaacagtttataacctgaaccgcaccactcctggagtgagg attgtcctgggaggcaccacagtgcacaacacgaaaaggaagttctggcttctggactgc acagccgaagcaaggagagctctcaagtcacatcaaggtcagcgagcagaagatgaaacg gtggttgggggaagggcacagcttcctctcttgtccccactacaggttttccctactaaa caaaggtgttggagagcagctttgggttctgtgctggttgttagaactcatctccaggga cctcaggatggaaaccagcagcctgcaccgcccgagaaggtcggctgggtccggaaattc tgcgggaaagggattttcagggagatttggaaaaaccgctatgtggtgctgaaaggggac cagctctacatctctgagaaggaggtaaaagatgagaaaaatattcaagaggtatttgac ctgagtgactatgagaagtgtgaagagctccggaagtccaagagcaggagcaagaaaaat catagcaagtttactcttgcccactccaaacagcccggtaacacggcacccaacctgatc ttcctggcagtgagtccagaagagaaggaatcgtggatcaatgccctcaactctgccatc acccgagccaagaaccgtatcttggatgaggtcaccgttgaggaggacagctatcttgcc catcccactcgagacagggcaaaaatccagcactcccgccgccccccaacaaggggacac ctaatggctgtggcttccacctctacctcggatgggatgctgaccttggacttgatccaa gaggaagacccttcccctgaggaaccaacctcttgtgctgagagctttcgggttgacctg gacaagtctgtggcccagctggcagggagccggcggagagcggactcagaccgcatccag ccctccgcagaccgggcaagcagtctctcccgaccttgggaaaaaacagacaaaggggcc acctacaccccccaggcacccaagaagttgacgcccacagagaaaggccgctgcgcctcc ctggaggagatcctatctcagcgggatgctgcctctgcccgcaccctccagctgcgggct gaggaacccccaacccctgccctccccaacccggggcagctgtcccggatccaggacctg gtagcaaggaaactggaggagactcaggagcttctggcagaggttcagggactgggagat gggaagcgaaaggccaaggacccccctcggtctccgccggattctgagtcagagcagctg ctgctggagacggaacggctgctgggagaggcatcatcgaattggagccaggcaaagagg gtgctgcaggaggtcagggagctgagagacctgtacagacagatggacctgcagaccccg gactcccacctcagacagaccaccccgcacagtcagtaccggaagagcctgatgtga >gi568815597f:150050911_150259520|GENSCAN_predicted_peptide_3|202_aa MAPVTMMGYRSGKMGILADVQLQVGPPGPWLHLVVIAPVPECITGIGIFSSWGSPDVGPL LYDIRAIMWGSKRVQIRTSQEKRYRGQSLGRATREALGTFSCGVPDITAPPCYELASGHM LLWRTEKGEQTPIMTPNSKRTEVKLKVIELYNRQALISRPLEWKSVLATVTVNTECQLDW IEGRKVLILGVSVRVLQKEINI >gi568815597f:150050911_150259520|GENSCAN_predicted_CDS_3|609_bp atggcccctgttacaatgatgggctataggtcaggtaaaatggggattctggctgatgtc cagcttcaagtgggtccaccggggccgtggctccacctggtggtcattgccccagtccct gagtgtataactgggattggtatattcagcagttggggaagccccgatgtggggcccctg ctttatgatataagagctatcatgtggggaagcaaaagggtacaaatcagaaccagccaa gagaagagatacagagggcaaagtctgggaagagctacacgggaagctttgggcaccttc tcctgtggagttccagacatcactgcccctccctgctacgagttggcttcaggtcacatg ttgctctggagaaccgagaagggtgagcagacaccaatcatgaccccaaacagcaagagg acagaagtgaaattgaaagtcatagagctctacaatcgtcaagctcttattagcagaccg ttggaatggaaatctgttttagctactgtaacggttaatactgagtgtcaacttgattgg attgaaggacgcaaagtattgatcctgggtgtgtccgtgagggtgttgcaaaaagagatt aacatttga >gi568815597f:150050911_150259520|GENSCAN_predicted_peptide_4|97_aa MDDFEEFKTSVEEGTADVVEIARGLDLEVELEDESELPQSHDKTLTDVELLLMDKQRKRF LEMESTCEDSVNIVEMTTKDLKYYNNLVVKAVAGFED >gi568815597f:150050911_150259520|GENSCAN_predicted_CDS_4|294_bp atggatgactttgaggagtttaagacatcagtggaggaaggaactgcagatgtggtagaa atagcaaggggactagatttagaagtggagcttgaagatgaatctgaattgcctcaatct catgataaaactttaacagatgtggagttgcttcttatggataagcaaagaaagagattt cttgagatggaatctacttgtgaagattctgtgaacatagtggaaatgacaacaaaggat ttaaaatattacaacaacttagttgttaaagcagtggcagggtttgaggattga >gi568815597f:150050911_150259520|GENSCAN_predicted_peptide_5|268_aa MEMKKKINLELRNRSPEEVTELVLDNCLCVNGEIEGLNDTFKELEFLSMANVELSSLARL PSLNKLRKLELSDNIISGGLEVLAEKCPNLTYLNLSGNKIKDLSTVEALQNLKNLKSLDL FNCEITNLEDYRESIFELLQQITYLDGFDQEDNEAPDSEEEDDEDGDEDDEEEEENEAGP PEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGE EEEEEEEGGLRGEKRKRDAEDDGEEEDD >gi568815597f:150050911_150259520|GENSCAN_predicted_CDS_5|807_bp atggagatgaagaagaagattaacctggagttaaggaacagatccccggaggaggtgaca gagttagtccttgataattgcctgtgtgtcaatggggaaattgaaggcctgaatgatact ttcaaagaactagaatttctgagtatggctaatgtggaactaagttcgctggcccggctt cccagcttaaataaacttcgaaaattggagcttagtgataatataatttctggaggcttg gaagtcctggcagagaaatgtccaaatcttacctacctcaatctgagtggaaacaaaata aaagatctcagtacagtagaagctctgcaaaatcttaaaaatttgaaaagtcttgacctg tttaactgtgagatcacaaacctggaagattatagagaaagtatttttgaactactgcag caaatcacatacttagatggatttgatcaggaggataatgaagcgccggactctgaagag gaggatgatgaggatggcgatgaagatgatgaagaggaagaggaaaatgaagctggtcca ccggaaggatatgaggaagaggaggaggaagaggaagaggaggatgaggatgaggatgaa gatgaagatgaagcaggttcagagttgggagagggagaagaggaagtgggcctctcatac ttaatgaaagaagaaattcaggatgaagaagatgatgatgactatgttgaagaaggggaa gaagaggaagaagaggaagaaggaggtcttcgaggggagaagaggaaacgagatgctgaa gacgatggagaggaagaagatgactag >gi568815597f:150050911_150259520|GENSCAN_predicted_peptide_6|304_aa MTSAKWLGFADQSQGIERHSELLSLQELMIQHMHYSVHLAFILLPYLASAPFVWLFIATR QEQGGQRELQMGASSWLVPLVKSMEEKEVSMSGLKVSVGFTFSNEGFRMYIPIGISSPVG SKHQFTFLRRAASMLHGRSSLVAGFIQCHMSCLSPLLGWKEDPEPLFHLDHMVSPDPPLS FSGNHLFLMVVVIVPKVSPFLLPWPLCRRSVSSSVTKAALDLGSLEREVAGSGSYSRCLS MVLLHPSPTGHTNGLYPANNAPSPHSPHPRPHRHVDPGLTVGRGWWQAQKRLLQMSSPCL TSLP >gi568815597f:150050911_150259520|GENSCAN_predicted_CDS_6|915_bp atgacatcagcaaaatggcttggctttgcagatcaatcacaggggatagaaaggcacagt gagctcctgtctctgcaggagctgatgatccagcacatgcattattctgttcatttggct tttatcctgctcccttatttagcttctgctccctttgtttggctatttattgctactcgg caggagcaaggagggcagagggagcttcagatgggtgcatcctcctggctggtgcctctg gtgaagagcatggaggagaaagaggtttcaatgtctggcttgaaagtatctgtgggtttc acattctctaacgagggatttaggatgtacattccaatcgggatttccagtcccgtgggg agcaaacatcagttcacattcctgagacgtgcagcctccatgctccacggacgcagctcc ttggtggcaggtttcattcagtgccacatgtcctgcctcagccctttgttgggctggaag gaagaccctgagcccctcttccatctggatcacatggtctctccagaccctcccctctct ttctctggaaaccacctttttctgatggtggtagtgattgttcctaaagtctctcctttc ctcctgccctggcctctctgccggaggtcagtgtcctcttcagtgacaaaagccgcccta gatctgggctccctggagagggaggtggctgggtctggcagttacagccgctgtctctcc atggtgctgctacacccctcccccactgggcatacaaatgggctttatccagcaaacaac gctccctccccgcactccccccaccccaggccacacaggcacgtggacccaggcctcacc gtgggaagggggtggtggcaggcacagaagagattgctccagatgagttctccttgcctc acttctcttccttag