GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:45:25

Sequence gi568815575f:2591361_2838256 : 246896 bp : 45.90% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1997   2051   55  1  1   81   36    55 0.097   1.08
 1.02 Intr +  14099  14280  182  0  2  111   66    43 0.058   3.99
 1.03 Intr +  17951  18143  193  1  1    4   43   137 0.149  -0.13
 1.04 Intr +  20754  20858  105  1  0   72   99    58 0.362   5.49
 1.05 Intr +  27380  27424   45  0  0   74   73    60 0.363   1.48
 1.06 Intr +  28069  28137   69  2  0   53  111    43 0.595   2.25
 1.07 Intr +  31330  31374   45  2  0   89   74    61 0.627   3.18
 1.08 Intr +  31989  32093  105  1  0   69  111    44 0.612   4.99
 1.09 Term +  35237  35274   38  0  2   87   47    19 0.108  -4.80
 1.10 PlyA +  36549  36554    6                               1.05

 2.02 PlyA -  37249  37244    6                               1.05
 2.01 Sngl -  41292  40801  492  0  0   64   46   177 0.743   7.16
 2.00 Prom -  43356  43317   40                              -4.16

 3.06 PlyA -  44467  44462    6                               1.05
 3.05 Term -  49720  49545  176  2  2   37   41   124 0.374   0.52
 3.04 Intr -  57500  57344  157  2  1   48  107    56 0.040   3.08
 3.03 Intr -  64659  64580   80  1  2   99   44    20 0.002  -2.03
 3.02 Intr -  85698  85612   87  1  0  106   69    48 0.461   4.64
 3.01 Init -  94988  94898   91  2  1   88   80    27 0.254   0.55
 3.00 Prom -  95928  95889   40                              -4.16

 4.00 Prom +  96563  96602   40                              -2.86
 4.01 Init + 100001 100067   67  1  1  110   88   248 0.995  26.23
 4.02 Intr + 123062 123094   33  0  0  114  105    15 0.831   3.99
 4.03 Intr + 128301 128345   45  1  0  108  101    57 0.986   7.38
 4.04 Intr + 128996 129064   69  0  0   57  111    61 0.947   4.45
 4.05 Intr + 131267 131314   48  0  0  116   87    37 0.915   5.05
 4.06 Intr + 134900 135013  114  0  0  104  115    95 0.963  14.22
 4.07 Intr + 146840 146896   57  0  0  107   99    86 0.851  10.46
 4.08 Intr + 149323 149366   44  2  2   80   94    -4 0.825  -2.64
 4.09 Intr + 149775 149857   83  2  2   81  121     3 0.839   1.34
 4.10 Term + 150264 150375  112  0  1   61   47   135 0.444   4.73
 4.11 PlyA + 150520 150525    6                               1.05

 5.00 Prom + 151730 151769   40                              -1.56
 5.01 Init + 160915 160975   61  0  1   91   94    44 0.897   4.71
 5.02 Intr + 162546 162662  117  1  0   80  110    19 0.826   3.74
 5.03 Term + 163267 163379  113  2  2   38   47    80 0.381  -2.38
 5.04 PlyA + 163864 163869    6                               1.05

 6.00 Prom + 169452 169491   40                              -3.76
 6.01 Init + 171066 171129   64  2  1   52  105   100 0.931   9.41
 6.02 Intr + 176192 176312  121  0  1   73   58    50 0.863   0.05
 6.03 Intr + 176998 177131  134  1  2   61   80    83 0.898   5.09
 6.04 Intr + 178381 178413   33  2  0   91   91    15 0.551   0.29
 6.05 Intr + 179190 179231   42  1  0   99  119    69 0.998   9.31
 6.06 Intr + 183356 183379   24  0  0   99  109    25 0.910   3.70
 6.07 Intr + 190706 190768   63  0  0  108   63    88 0.153   6.99
 6.08 Intr + 203175 203243   69  1  0  106   96    87 0.791  10.45
 6.09 Intr + 205950 206026   77  1  2  109   64    62 0.705   5.13
 6.10 Intr + 207902 208019  118  1  1   59   62   110 0.655   5.54
 6.11 Intr + 215341 215412   72  2  0  108   45    32 0.280   0.28
 6.12 Intr + 216825 216860   36  1  0  126   88     5 0.587   2.53
 6.13 Intr + 219976 220092  117  2  0  104  115    44 0.969   9.14
 6.14 Term + 221150 221274  125  0  2  105   39    30 0.552  -1.65
 6.15 PlyA + 222629 222634    6                               1.05

 7.04 PlyA - 222681 222676    6                               1.05
 7.03 Term - 228550 228435  116  2  2   50   39   110 0.906   1.03
 7.02 Intr - 232674 232650   25  0  1   93  115    26 0.870   3.40
 7.01 Intr - 238483 238223  261  1  0  108   49   185 0.947  14.28

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 190706 190788   83  0  2  108   47   115 0.824   7.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:2591361_2838256|GENSCAN_predicted_peptide_1|278_aa
MALKNDDACVCADLTKFSGALVMNPMMGEEIYFSLTATLPLRQATGSTSSCSVDVLQLEF
ELISSSLPSEWSGIEPIFQSSAGSAPPGPWGRFRPAAFARALHSRTISARLGRAVARGAV
LALRLLGLLRRLVAAPVSERRDPGTDDCNSHVLQTGDPAPPNAPKPKPDPNPNRPGFTGA
DFDLADAFRDGGNNDPAPLNSPKLKPNANPEQPGFIGDDFDLADALHDKGNCTHNLNSHL
LQTDEPAPLNPPKPKPNPNPKQPDSTGDDFDFTDVSSW

>gi568815575f:2591361_2838256|GENSCAN_predicted_CDS_1|837_bp
atggcgctgaagaatgatgatgcctgtgtgtgtgcggacctgaccaaattctcaggggcc
ttagtcatgaacccaatgatgggtgaggaaatatatttctctctcactgctaccctgcca
ttacgacaggccacaggcagcacttccagctgctccgtggatgtgctgcaacttgaattt
gaacttatttcaagttctttgccttcagaatggtcaggaatagagcccatcttccagtcc
tccgcgggctccgccccacccggcccgtgggggaggttccgtcccgccgccttcgcccgc
gcgctgcactcgcggacgatctctgctcgccttgggcgcgccgtggcgcgcggggccgtg
ctggcgctgcggctcctcggcctgctccgccgtctggtggccgccccggtgagcgagcgg
cgggatccgggtactgatgattgcaactctcatgttttacaaacaggtgacccagcacca
cctaatgcccccaaaccaaagccagatccaaaccccaaccgacctggtttcactggggct
gactttgacttagcagatgcctttcgtgatggaggaaataacgacccagcacctcttaat
tcacccaagctgaagccaaatgcgaaccctgagcagcctggattcattggggatgacttt
gacttagcagatgccttacatgacaaaggaaactgcactcataatctcaactctcatctt
ttacaaacagacgagccagcaccactgaacccacccaaaccaaagccaaatccaaacccc
aagcagcctgattccaccggggatgactttgatttcacagatgtttcttcatggtga

>gi568815575f:2591361_2838256|GENSCAN_predicted_peptide_2|163_aa
MSLRTRKCYNYPYELDGSKCRYEPGNTTIFHMNQKVLQCHYEPGSVTMSLKLRSATIIPM
NQEVLQCPCKPGSATIIHMNQEVSQCPYEPGSATIICMNLEMLQCPYEPGSATIIRMNQK
VLQCPCKLGSSTIIGMKEEVLQCPCEPGSAIIHMNQEVLQLSG

>gi568815575f:2591361_2838256|GENSCAN_predicted_CDS_2|492_bp
atgtccctacgaaccaggaagtgctacaattatccctatgaactagacggttccaaatgt
cgttatgaaccaggaaatactacaattttccatatgaaccaaaaagtgttgcagtgtcac
tatgaaccaggaagtgtcacaatgtccctcaaactaagaagtgctacaattatccctatg
aaccaggaagtattgcaatgtccctgcaaaccaggaagtgctacaattatccatatgaac
caggaagtgtcacaatgtccctatgaaccaggaagtgctacaattatctgtatgaacctg
gaaatgttacaatgtccctatgaaccaggaagtgctacaattatccgtatgaaccagaaa
gtgttacaatgtccctgcaaattaggaagttctacaattatcggaatgaaagaggaagtg
ttacaatgtccctgtgaaccaggaagtgctattatccatatgaaccaggaagtgctacaa
ttatctggatga

>gi568815575f:2591361_2838256|GENSCAN_predicted_peptide_3|196_aa
MEFHHVGQAGLELLTSTDLPASASRSAGITGSDQDTCTFCLQVLVTGKSMNRILIDVCAD
LPSLMIQSPAHSPLWVMRAGDYAANRREFLTRHPQPLTCGLSLLMFSQWWEMRPANGTLY
RTTVLNCWEDKARSQIKSGHFQPHNGTVVRTSSTRDTRNTKECGTIQQSRIQRHEWCLLR
AFRAANEQEMTAGISQ

>gi568815575f:2591361_2838256|GENSCAN_predicted_CDS_3|591_bp
atggagtttcaccacgttggccaggctggtctcgaactcctgacctcaactgatctgccg
gcctcggcctcccgaagtgctggtattacagggtcagatcaggacacctgcacattctgt
ttgcaggttctcgtcaccggcaaatcaatgaaccgaattttaattgatgtgtgtgcagat
ttaccctcactgatgatccagtcacctgctcactctcctctttgggtcatgagagctggt
gactatgcagccaacaggagggaattcttgacaagacatccccagcccctgacttgtgga
ttgagcctgctgatgttcagtcagtggtgggaaatgagacctgctaatgggaccctgtac
cgcaccacggtgctgaactgttgggaagataaagcaagaagtcagataaagtctggacat
ttccagcctcacaatggcactgtggttagaacttcatcaacaagagacacgcgtaacacc
aaggaatgtggcacaattcagcagtcccgaatacagcggcatgaatggtgccttctaaga
gcattcagagcagctaacgagcaagagatgacggctggcatttctcaataa

>gi568815575f:2591361_2838256|GENSCAN_predicted_peptide_4|223_aa
MARGAALALLLFGLLGVLVAAPDGGFDLSDALPGDDFDLGDAVVDGENDDPRPPNPPKPM
PNPNPNHPSSSGSFSDADLADGVSGGEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKL
CFKENAEQGEVDMESHRNANAEPAEIKPLAPESCRNCVHNLGCLQITCPSSTSETPGSPD
FFLIKIRYSSVSRYSSKSRYSLHPDTVLPKMYKMYRIFPTLKT

>gi568815575f:2591361_2838256|GENSCAN_predicted_CDS_4|672_bp
atggcccgcggggctgcgctggcgctgctgctcttcggcctgctgggtgttctggtcgcc
gccccggatggtggtttcgatttatccgatgcccttcctggggatgactttgacttagga
gatgctgttgttgatggagaaaatgacgacccacgaccaccgaacccacccaaaccgatg
ccaaatccaaaccccaaccaccctagttcctccggtagcttttcagatgctgaccttgcg
gatggcgtttcaggtggagaagccgacgccccaggcgtgatccccgggattgtgggggct
gtcgtggtcgccgtggctggagccatctctagcttcattgcttaccagaaaaagaagcta
tgcttcaaagaaaatgcagaacaaggggaggtggacatggagagccaccggaatgccaac
gcagagccagctgaaataaaaccactggctcctgaaagttgtaggaactgtgtccacaat
cttggctgtttacaaatcacgtgtccatcgagcacgtctgaaacccctggtagccccgac
ttctttttaattaaaataagatactcctctgtatccagatactcctctaaatccaggtac
tccctacatccagatactgtacttcctaagatgtacaagatgtaccgcattttcccaaca
ctgaagacttga

>gi568815575f:2591361_2838256|GENSCAN_predicted_peptide_5|96_aa
MESWWGLPCLAFLCFLMHARVQCSINYVRYATPHYKVDCVLDDLSIRWLMKSVLSTLKAG
RLQAEEQGEPVQVPKLKNLESDVPASTMGERCRPED

>gi568815575f:2591361_2838256|GENSCAN_predicted_CDS_5|291_bp
atggagagctggtggggacttccctgtcttgcgttcctgtgttttctaatgcacgcccga
gtacaatgttcaataaattatgtgaggtatgcaacacctcattataaagttgactgtgtg
ctagatgatttgtccatccgttggctgatgaaaagtgttctgagcactctgaaggcaggc
cgtctgcaggctgaggagcaaggagagccagtccaggttccaaaactgaagaacttggag
tctgatgttccagcatccaccatgggagaaagatgtaggccagaagactag

>gi568815575f:2591361_2838256|GENSCAN_predicted_peptide_6|364_aa
MGSEEQIMHQGGLLSSGVCSPVENKPRESNGVMCNPTLETETPELALSTWDISQPRGLTP
DPCLDWNCWQPWRGDVAQIQEADTVPVPQPSLSSLDHDDQERWRRPDTFIRLTAFGSGQR
DFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPDSGGSYFNDVDRDDGRYPPRPRPR
PPAGGGGGGYSSYGNSDNTHGTPTSGHAMALVSGVPFFVSMLSIEKNDETSVKDLFAKVK
VKGAPQETGRGGYRLNSRYGNTYGKGIMSYRICGDHHSTYGNPEGNMVAKIVSPIVSVVV
VTLLGAAASYFKLNNRRNCFRTHGNQKGVPIPTVFALGFAFGLKNPKTFPCAPSAGEWAV
STVS

>gi568815575f:2591361_2838256|GENSCAN_predicted_CDS_6|1095_bp
atgggttccgaggagcagatcatgcaccagggcggcctgctcagctctggtgtctgcagc
cccgtggaaaataaaccccgtgaaagcaatggcgtcatgtgcaacccgaccttggagaca
gagaccccagagttagcgttgtctacctgggacatctcccagcccaggggtcttactcca
gacccgtgtctcgactggaactgctggcagccttggaggggagatgttgcacagatccaa
gaggctgacacggttcctgtcccccagcccagtctgagcagcttggaccatgatgatcaa
gagcgctggaggaggccagacacattcattagattaactgcttttggatcaggtcaaaga
gactttgatttggcagatgcccttgatgaccctgaacccaccaagaagccaaactcagat
atctacccaaagccaaaaccaccttactacccacagcccgagaatcccgacagcggtgga
agttacttcaatgatgtggaccgtgatgacggacgctacccgcccaggcccaggccacgg
ccgcctgcaggaggtggcggcggtggctactccagttatggcaactccgacaacacgcac
ggtacccctacatctgggcatgcgatggccctggtgtctggtgttcccttctttgtgtcc
atgttgtcaatcgagaaaaatgacgagacgagcgtaaaagatttatttgccaaagttaag
gttaagggcgcgccccaggagacaggaagagggggctatagactcaactctcgttatgga
aatacttatggtaaaggaattatgtcttacagaatatgtggagatcaccattcaacgtat
ggcaatccagaaggcaatatggtagcaaaaatcgtgtctcccatcgtatccgtggtggtg
gtgacactgctgggagcagcagccagttatttcaaactaaacaataggagaaattgtttc
aggacccatggaaaccagaaaggggtgcccattcctacggtgtttgctttaggatttgca
tttggcctcaaaaatcctaaaaccttcccatgcgctccctctgctggtgaatgggcagta
tcaaccgttagctaa

>gi568815575f:2591361_2838256|GENSCAN_predicted_peptide_7|133_aa
SPATPLRLNTHAPSNDNAPGTPPDLSGVSSCPAAPRTCLEFWASSSSTPAGAPRSPLSTP
WTTPALPDASICTSSELGLPLPAPPGQEAMESLAAALYEVHNWAQIKVVVEAFRILKEAE
KALNDTPKTNFYV

>gi568815575f:2591361_2838256|GENSCAN_predicted_CDS_7|402_bp
tcacctgcgaccccgctgcgtcttaacacccatgcgcccagcaacgacaacgcccccggg
acaccacccgacctcagcggtgtcagcagctgccccgccgccccgcgcacctgcttggag
ttctgggcatcctcttcctccaccccagctggcgccccccggtcacccctctccactccc
tggaccacccctgcgctcccggacgccagtatctgcacctcctccgagcttgggctgcct
ctgcccgcgccccccggccaggaagccatggagagcttggcagcagctttgtatgaagtt
cataactgggctcagatcaaagttgtggtggaagcctttagaattctgaaggaagcagaa
aaggcattgaatgacacccccaagaccaacttttatgtttaa