GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:45:28

Sequence gi568815574f:2591361_2838256 : 246896 bp : 44.32% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1997   2051   55  1  1   81   36    55 0.097   1.08
 1.02 Intr +  14099  14280  182  0  2  111   66    43 0.058   3.99
 1.03 Intr +  17951  18143  193  1  1    4   43   137 0.149  -0.13
 1.04 Intr +  20754  20858  105  1  0   72   99    58 0.362   5.49
 1.05 Intr +  27380  27424   45  0  0   74   73    60 0.363   1.48
 1.06 Intr +  28069  28137   69  2  0   53  111    43 0.595   2.25
 1.07 Intr +  31330  31374   45  2  0   89   74    61 0.627   3.18
 1.08 Intr +  31989  32093  105  1  0   69  111    44 0.612   4.99
 1.09 Term +  35237  35274   38  0  2   87   47    19 0.108  -4.80
 1.10 PlyA +  36549  36554    6                               1.05

 2.02 PlyA -  37249  37244    6                               1.05
 2.01 Sngl -  41292  40801  492  0  0   64   46   177 0.743   7.16
 2.00 Prom -  43356  43317   40                              -4.16

 3.06 PlyA -  44467  44462    6                               1.05
 3.05 Term -  49720  49545  176  2  2   37   41   124 0.374   0.52
 3.04 Intr -  57500  57344  157  2  1   48  107    56 0.040   3.08
 3.03 Intr -  64659  64580   80  1  2   99   44    20 0.002  -2.03
 3.02 Intr -  85698  85612   87  1  0  106   69    48 0.461   4.64
 3.01 Init -  94988  94898   91  2  1   88   80    27 0.254   0.55
 3.00 Prom -  95928  95889   40                              -4.16

 4.00 Prom +  96563  96602   40                              -2.86
 4.01 Init + 100001 100067   67  1  1  110   88   248 0.995  26.23
 4.02 Intr + 123062 123094   33  0  0  114  105    15 0.831   3.99
 4.03 Intr + 128301 128345   45  1  0  108  101    57 0.986   7.38
 4.04 Intr + 128996 129064   69  0  0   57  111    61 0.947   4.45
 4.05 Intr + 131267 131314   48  0  0  116   87    37 0.915   5.05
 4.06 Intr + 134900 135013  114  0  0  104  115    95 0.963  14.22
 4.07 Intr + 146840 146896   57  0  0  107   99    86 0.851  10.46
 4.08 Intr + 149323 149366   44  2  2   80   94    -4 0.825  -2.64
 4.09 Intr + 149775 149857   83  2  2   81  121     3 0.839   1.34
 4.10 Term + 150264 150375  112  0  1   61   47   135 0.444   4.73
 4.11 PlyA + 150520 150525    6                               1.05

 5.00 Prom + 151730 151769   40                              -1.56
 5.01 Init + 160915 160975   61  0  1   91   94    44 0.897   4.71
 5.02 Intr + 162546 162662  117  1  0   80  110    19 0.826   3.74
 5.03 Term + 163267 163379  113  2  2   38   47    80 0.381  -2.38
 5.04 PlyA + 163864 163869    6                               1.05

 6.00 Prom + 169452 169491   40                              -3.76
 6.01 Init + 171066 171129   64  2  1   52  105   100 0.931   9.41
 6.02 Intr + 176192 176312  121  0  1   73   58    50 0.863   0.05
 6.03 Intr + 176998 177131  134  1  2   61   80    83 0.898   5.09
 6.04 Intr + 178381 178413   33  2  0   91   91    15 0.550   0.29
 6.05 Intr + 179190 179231   42  1  0   99  119    69 0.995   9.31
 6.06 Intr + 183356 183379   24  0  0   99  109    25 0.719   3.70
 6.07 Term + 188206 188228   23  2  2   97   45    22 0.377  -2.73
 6.08 PlyA + 190569 190574    6                               1.05

 7.02 PlyA - 191477 191472    6                               1.05
 7.01 Sngl - 196243 195629  615  1  0   46   48   392 0.736  27.20
 7.00 Prom - 196571 196532   40                              -7.56

 8.00 Prom + 196737 196776   40                              -8.36
 8.01 Init + 198491 198579   89  1  2   84   54    60 0.776   0.81
 8.02 Term + 198652 198847  196  1  1   23   49   285 0.946  14.98
 8.03 PlyA + 199239 199244    6                               1.05

 9.03 PlyA - 199260 199255    6                               1.05
 9.02 Term - 215786 215085  702  2  0   15   48   236 0.143   5.83
 9.01 Init - 216956 216552  405  2  0   78   80   248 0.150  19.59
 9.00 Prom - 217030 216991   40                              -8.56

10.03 PlyA - 217064 217059    6                               1.05
10.02 Term - 219317 219045  273  2  0   69   37   217 0.865  10.17
10.01 Init - 222303 222298    6  0  0   78   90     0 0.526   0.07
10.00 Prom - 232153 232114   40                              -2.36

11.00 Prom + 234554 234593   40                              -6.06
11.01 Init + 238945 239090  146  0  2   78   98   127 0.598  12.29
11.02 Term + 239887 240037  151  1  1   29   38   109 0.604  -2.62
11.03 PlyA + 240201 240206    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 216956 216411  546  2  0   78   41   263 0.834  16.71


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815574f:2591361_2838256|GENSCAN_predicted_peptide_1|278_aa
MALKNDDACVCADLTKFSGALVMNPMMGEEIYFSLTATLPLRQATGSTSSCSVDVLQLEF
ELISSSLPSEWSGIEPIFQSSAGSAPPGPWGRFRPAAFARALHSRTISARLGRAVARGAV
LALRLLGLLRRLVAAPVSERRDPGTDDCNSHVLQTGDPAPPNAPKPKPDPNPNRPGFTGA
DFDLADAFRDGGNNDPAPLNSPKLKPNANPEQPGFIGDDFDLADALHDKGNCTHNLNSHL
LQTDEPAPLNPPKPKPNPNPKQPDSTGDDFDFTDVSSW

>gi568815574f:2591361_2838256|GENSCAN_predicted_CDS_1|837_bp
atggcgctgaagaatgatgatgcctgtgtgtgtgcggacctgaccaaattctcaggggcc
ttagtcatgaacccaatgatgggtgaggaaatatatttctctctcactgctaccctgcca
ttacgacaggccacaggcagcacttccagctgctccgtggatgtgctgcaacttgaattt
gaacttatttcaagttctttgccttcagaatggtcaggaatagagcccatcttccagtcc
tccgcgggctccgccccacccggcccgtgggggaggttccgtcccgccgccttcgcccgc
gcgctgcactcgcggacgatctctgctcgccttgggcgcgccgtggcgcgcggggccgtg
ctggcgctgcggctcctcggcctgctccgccgtctggtggccgccccggtgagcgagcgg
cgggatccgggtactgatgattgcaactctcatgttttacaaacaggtgacccagcacca
cctaatgcccccaaaccaaagccagatccaaaccccaaccgacctggtttcactggggct
gactttgacttagcagatgcctttcgtgatggaggaaataacgacccagcacctcttaat
tcacccaagctgaagccaaatgcgaaccctgagcagcctggattcattggggatgacttt
gacttagcagatgccttacatgacaaaggaaactgcactcataatctcaactctcatctt
ttacaaacagacgagccagcaccactgaacccacccaaaccaaagccaaatccaaacccc
aagcagcctgattccaccggggatgactttgatttcacagatgtttcttcatggtga

>gi568815574f:2591361_2838256|GENSCAN_predicted_peptide_2|163_aa
MSLRTRKCYNYPYELDGSKCRYEPGNTTIFHMNQKVLQCHYEPGSVTMSLKLRSATIIPM
NQEVLQCPCKPGSATIIHMNQEVSQCPYEPGSATIICMNLEMLQCPYEPGSATIIRMNQK
VLQCPCKLGSSTIIGMKEEVLQCPCEPGSAIIHMNQEVLQLSG

>gi568815574f:2591361_2838256|GENSCAN_predicted_CDS_2|492_bp
atgtccctacgaaccaggaagtgctacaattatccctatgaactagacggttccaaatgt
cgttatgaaccaggaaatactacaattttccatatgaaccaaaaagtgttgcagtgtcac
tatgaaccaggaagtgtcacaatgtccctcaaactaagaagtgctacaattatccctatg
aaccaggaagtattgcaatgtccctgcaaaccaggaagtgctacaattatccatatgaac
caggaagtgtcacaatgtccctatgaaccaggaagtgctacaattatctgtatgaacctg
gaaatgttacaatgtccctatgaaccaggaagtgctacaattatccgtatgaaccagaaa
gtgttacaatgtccctgcaaattaggaagttctacaattatcggaatgaaagaggaagtg
ttacaatgtccctgtgaaccaggaagtgctattatccatatgaaccaggaagtgctacaa
ttatctggatga

>gi568815574f:2591361_2838256|GENSCAN_predicted_peptide_3|196_aa
MEFHHVGQAGLELLTSTDLPASASRSAGITGSDQDTCTFCLQVLVTGKSMNRILIDVCAD
LPSLMIQSPAHSPLWVMRAGDYAANRREFLTRHPQPLTCGLSLLMFSQWWEMRPANGTLY
RTTVLNCWEDKARSQIKSGHFQPHNGTVVRTSSTRDTRNTKECGTIQQSRIQRHEWCLLR
AFRAANEQEMTAGISQ

>gi568815574f:2591361_2838256|GENSCAN_predicted_CDS_3|591_bp
atggagtttcaccacgttggccaggctggtctcgaactcctgacctcaactgatctgccg
gcctcggcctcccgaagtgctggtattacagggtcagatcaggacacctgcacattctgt
ttgcaggttctcgtcaccggcaaatcaatgaaccgaattttaattgatgtgtgtgcagat
ttaccctcactgatgatccagtcacctgctcactctcctctttgggtcatgagagctggt
gactatgcagccaacaggagggaattcttgacaagacatccccagcccctgacttgtgga
ttgagcctgctgatgttcagtcagtggtgggaaatgagacctgctaatgggaccctgtac
cgcaccacggtgctgaactgttgggaagataaagcaagaagtcagataaagtctggacat
ttccagcctcacaatggcactgtggttagaacttcatcaacaagagacacgcgtaacacc
aaggaatgtggcacaattcagcagtcccgaatacagcggcatgaatggtgccttctaaga
gcattcagagcagctaacgagcaagagatgacggctggcatttctcaataa

>gi568815574f:2591361_2838256|GENSCAN_predicted_peptide_4|223_aa
MARGAALALLLFGLLGVLVAAPDGGFDLSDALPGDDFDLGDAVVDGENDDPRPPNPPKPM
PNPNPNHPSSSGSFSDADLADGVSGGEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKL
CFKENAEQGEVDMESHRNANAEPAEIKPLAPESCRNCVHNLGCLQITCPSSTSETPGSPD
FFLIKIRYSSVSRYSSKSRYSLHPDTVLPKMYKMYRIFPTLKT

>gi568815574f:2591361_2838256|GENSCAN_predicted_CDS_4|672_bp
atggcccgcggggctgcgctggcgctgctgctcttcggcctgctgggtgttctggtcgcc
gccccggatggtggtttcgatttatccgatgcccttcctggggatgactttgacttagga
gatgctgttgttgatggagaaaatgacgacccacgaccaccgaacccacccaaaccgatg
ccaaatccaaaccccaaccaccctagttcctccggtagcttttcagatgctgaccttgcg
gatggcgtttcaggtggagaagccgacgccccaggcgtgatccccgggattgtgggggct
gtcgtggtcgccgtggctggagccatctctagcttcattgcttaccagaaaaagaagcta
tgcttcaaagaaaatgcagaacaaggggaggtggacatggagagccaccggaatgccaac
gcagagccagctgaaataaaaccactggctcctgaaagttgtaggaactgtgtccacaat
cttggctgtttacaaatcacgtgtccatcgagcacgtctgaaacccctggtagccccgac
ttctttttaattaaaataagatactcctctgtatccagatactcctctaaatccaggtac
tccctacatccagatactgtacttcctaagatgtacaagatgtaccgcattttcccaaca
ctgaagacttga

>gi568815574f:2591361_2838256|GENSCAN_predicted_peptide_5|96_aa
MESWWGLPCLAFLCFLMHARVQCSINYVRYATPHYKVDCVLDDLSIRWLMKSVLSTLKAG
RLQAEEQGEPVQVPKLKNLESDVPASTMGERCRPED

>gi568815574f:2591361_2838256|GENSCAN_predicted_CDS_5|291_bp
atggagagctggtggggacttccctgtcttgcgttcctgtgttttctaatgcacgcccga
gtacaatgttcaataaattatgtgaggtatgcaacacctcattataaagttgactgtgtg
ctagatgatttgtccatccgttggctgatgaaaagtgttctgagcactctgaaggcaggc
cgtctgcaggctgaggagcaaggagagccagtccaggttccaaaactgaagaacttggag
tctgatgttccagcatccaccatgggagaaagatgtaggccagaagactag

>gi568815574f:2591361_2838256|GENSCAN_predicted_peptide_6|146_aa
MGSEEQIMHQGGLLSSGVCSPVENKPRESNGVMCNPTLETETPELALSTWDISQPRGLTP
DPCLDWNCWQPWRGDVAQIQEADTVPVPQPSLSSLDHDDQERWRRPDTFIRLTAFGSGQR
DFDLADALDDPEPTKKPNSDTKIHSC

>gi568815574f:2591361_2838256|GENSCAN_predicted_CDS_6|441_bp
atgggttccgaggagcagatcatgcaccagggcggcctgctcagctctggtgtctgcagc
cccgtggaaaataaaccccgtgaaagcaatggcgtcatgtgcaacccgaccttggagaca
gagaccccagagttagcgttgtctacctgggacatctcccagcccaggggtcttactcca
gacccgtgtctcgactggaactgctggcagccttggaggggagatgttgcacagatccaa
gaggctgacacggttcctgtcccccagcccagtctgagcagcttggaccatgatgatcaa
gagcgctggaggaggccagacacattcattagattaactgcttttggatcaggtcaaaga
gactttgatttggcagatgcccttgatgaccctgaacccaccaagaagccaaactcagac
accaaaatccacagctgctga

>gi568815574f:2591361_2838256|GENSCAN_predicted_peptide_7|204_aa
MQSYASAMLSVFNSDDYSPAVQENIPALRRSSSFLCTESCNSKYQCETGENSKGNVQDRV
KRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMH
REKYPNYKYRPRRKAKMLPKNCSLLPADPASVLCSEVQLDNRLYRDDCTKATHSRMEHQL
GHLPPINAASSPQQRDRYSHWTKL

>gi568815574f:2591361_2838256|GENSCAN_predicted_CDS_7|615_bp
atgcaatcatatgcttctgctatgttaagcgtattcaacagcgatgattacagtccagct
gtgcaagagaatattcccgctctccggagaagctcttccttcctttgcactgaaagctgt
aactctaagtatcagtgtgaaacgggagaaaacagtaaaggcaacgtccaggatagagtg
aagcgacccatgaacgcattcatcgtgtggtctcgcgatcagaggcgcaagatggctcta
gagaatcccagaatgcgaaactcagagatcagcaagcagctgggataccagtggaaaatg
cttactgaagccgaaaaatggccattcttccaggaggcacagaaattacaggccatgcac
agagagaaatacccgaattataagtatcgacctcgtcggaaggcgaagatgctgccgaag
aattgcagtttgcttcccgcagatcccgcttcggtactctgcagcgaagtgcaactggac
aacaggttgtacagggatgactgtacgaaagccacacactcaagaatggagcaccagcta
ggccacttaccgcccatcaacgcagccagctcaccgcagcaacgggaccgctacagccac
tggacaaagctgtag

>gi568815574f:2591361_2838256|GENSCAN_predicted_peptide_8|94_aa
MERYSVQLRPATLQDAAPATLHLIPCGPPRLRGDEVAVPSGLVGYVMVTEQEEVSMGKPD
PWRGSGSDNQEEEPLERDFDRFLGTTTSFSRFTL

>gi568815574f:2591361_2838256|GENSCAN_predicted_CDS_8|285_bp
atggagaggtacagcgtccagttgcgcccagccacactgcaggacgccgcccccgccaca
ctacacctgataccctgcggcccaccacgtctacggggcgacgaggtggcagtgccgtcc
ggcctcgtgggatacgtgatggtgactgaacaggaggaggtgtcgatggggaagccagac
ccctggcggggttccgggagtgacaaccaagaagaggaacctctggagcgggactttgac
cgcttcctcggaaccactaccagcttcagccgcttcaccctgtag

>gi568815574f:2591361_2838256|GENSCAN_predicted_peptide_9|368_aa
MDKFLDTYTLPRLNQEEVESLNRPITGSEIEALINSLPTKTSPELDGFTAEFYQWYKEEL
IPLLLKLFQSAEKEGILPNSFYKASIILIPKPGRVTIKKENFRPISLVNIDAGILKKILA
NQIQQHIQKLIHHDQVIYRFNAIPMKLPMAFFTELEKTTLNSTWNQKRACIAKTILSKKN
KAGGIMLPDFKLYYKATITKTAWYWYQNREIDQWNRTEASEIIPHIYNHLIFEKPEKNKK
WGKDSLFNKWCWETWLAICRKLKLPPFLTPYTKINSRWIKDLNVRPKTIKTVEENKGNTT
QDIGMGKDFMSKTRKAMATKAKIDKWDLIKLKSFCTAKETTIGVNKLATEWEKIFGIYPS
DKGLISRI

>gi568815574f:2591361_2838256|GENSCAN_predicted_CDS_9|1107_bp
atggacaaattcctggacacctacactctcccaagactaaaccaggaagaagttgaatcc
ctgaatagaccaataacaggctctgaaattgaggcattaattaatagcctaccaaccaaa
acaagtccagaactagatggattcacagctgaattctaccagtggtacaaagaggagctg
ataccattacttctgaaactattccaatcagcagaaaaagagggaatcctccctaattca
ttttacaaggccagcatcatcctgataccaaagcctggcagagtcacaataaaaaaagag
aattttagaccaatatccctggtgaacattgatgcaggaatcctcaagaaaatactggca
aaccaaatccagcagcacatccaaaagcttatccatcatgatcaggtaatttatagattc
aatgccatccccatgaagctaccaatggctttcttcacagaattggaaaaaactacttta
aactccacatggaaccaaaaaagagcctgcattgccaagacaatcctaagcaagaagaac
aaagctggaggcatcatgctgcctgacttcaaactatactacaaggctacaataaccaaa
acagcatggtactggtaccaaaacagagagatagaccaatggaacagaacagaggcctca
gaaataataccacacatctacaaccatctgatctttgagaaacctgagaaaaacaagaaa
tggggaaaggattccctatttaataaatggtgctgggaaacctggctagccatatgtaga
aagctgaaactgcctcccttccttacaccttatacaaaaattaattcaagatggattaaa
gacttaaatgttagacctaaaaccataaaaactgtagaagaaaacaaaggcaataccact
caagacataggcatgggcaaagacttcatgagtaaaacacgaaaagcaatggcaacaaaa
gccaaaatagacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaact
accatcggagtgaacaagctagctacagaatgggagaaaatttttggaatctacccatct
gacaaagggctaatatccagaatctga

>gi568815574f:2591361_2838256|GENSCAN_predicted_peptide_10|92_aa
MEDCSSLPVMEQSCTENDFDELTEVGFRRLVITNFSELKEDIRTHRKEAKNLEKRLDKWL
TRTNSVENSLNDLKELKTMARKICDTCTSFSS

>gi568815574f:2591361_2838256|GENSCAN_predicted_CDS_10|279_bp
atggaggattgcagctccttaccagtgatggaacaaagctgcacagagaatgactttgat
gagttgacagaagtaggcttcagaaggttagtaataacaaacttctctgagctaaaggag
gatattcgaacccatcgcaaggaagctaaaaaccttgaaaaaagattagacaaatggcta
actagaacaaacagtgtagagaatagcttaaatgacctgaaggagctaaaaaccatggca
cgaaaaatatgtgacacatgcacaagcttcagtagctga

>gi568815574f:2591361_2838256|GENSCAN_predicted_peptide_11|98_aa
MGRNQRKKAENSEKQNASSPPKEHNSSSSREEKWVENEFDELTEVGFRRTALQELLKEAL
NMERNNQYQPLQKHANCKDHQHYEETASTNGQNNQLAS

>gi568815574f:2591361_2838256|GENSCAN_predicted_CDS_11|297_bp
atggggagaaaccagcgcaaaaaggctgaaaattccgaaaagcagaatgcctcttctcct
ccaaaggaacacaactcctcatcctcaagggaagaaaaatgggtggagaatgagtttgat
gaattgacagaagtaggtttcagaagaactgccttacaagagctcctaaaggaagcacta
aacatggaaaggaacaaccagtaccagcccctgcaaaaacatgccaattgtaaagaccat
caacactatgaagaaactgcatcaactaatggacaaaataaccagctagcatcataa