GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:40:48

Sequence gi568815596f:38381851_38582801 : 200951 bp : 43.92% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   7029   7068   40                              -2.26
 1.01 Sngl +  15679  15912  234  0  0   97   37   190 0.418   8.10
 1.02 PlyA +  16120  16125    6                               1.05

 2.00 Prom +  19256  19295   40                              -1.96
 2.01 Init +  21473  21551   79  1  1   47   78    30 0.246  -2.86
 2.02 Intr +  27243  27333   91  1  1  123   96    48 0.645   8.15
 2.03 Intr +  34917  35043  127  0  1   63   70    34 0.136  -0.22
 2.04 Intr +  58033  58197  165  0  0   43   76   116 0.055   6.06
 2.05 Intr +  59139  59253  115  2  1   50   53    60 0.051  -1.28
 2.06 Term +  67152  67192   41  1  2  124   54     8 0.044  -1.65
 2.07 PlyA +  68433  68438    6                               1.05

 3.00 Prom +  69047  69086   40                              -3.96
 3.01 Init +  77268  77316   49  2  1   92   64    77 0.588   4.81
 3.02 Intr +  81628  81721   94  2  1   26   65    75 0.458  -1.98
 3.03 Intr +  82976  83096  121  2  1   60   77    96 0.648   6.20
 3.04 Term +  93245  93436  192  1  0  111   37    43 0.286  -1.08
 3.05 PlyA +  94577  94582    6                              -0.45

 4.00 Prom +  96301  96340   40                              -4.46
 4.01 Sngl + 100001 100954  954  1  0   89   37  1319 0.999 123.52
 4.02 PlyA + 101002 101007    6                               1.05

 5.07 PlyA - 105902 105897    6                               1.05
 5.06 Term - 107683 107518  166  0  1   74   45    99 0.132   1.59
 5.05 Intr - 114628 114499  130  2  1  104   37    66 0.198   2.85
 5.04 Intr - 153694 153604   91  1  1    2   82   115 0.279   1.87
 5.03 Intr - 153909 153756  154  2  1   89   56   103 0.538   7.27
 5.02 Intr - 154336 154104  233  1  2   32    2   149 0.541  -2.73
 5.01 Init - 157184 157104   81  2  0   74   80   116 0.820  10.37
 5.00 Prom - 158907 158868   40                              -5.06

 6.05 PlyA - 161020 161015    6                               1.05
 6.04 Term - 172302 172250   53  1  2  102   51    20 0.008  -2.71
 6.03 Intr - 186447 186349   99  1  0   97   91    34 0.801   4.68
 6.02 Intr - 186593 186536   58  2  1   78  111    67 0.947   6.46
 6.01 Intr - 195682 195611   72  1  0   65  115    40 0.176   4.00

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:38381851_38582801|GENSCAN_predicted_peptide_1|77_aa
MPEPPPAAMGSCAARASPTSTAPSSMAPGPIHRPRAEECGRKVQDWQAAPPATLVWDPLG
EASWTPESSGDLENLYV

>gi568815596f:38381851_38582801|GENSCAN_predicted_CDS_1|234_bp
atgcctgagcctccccctgccgccatgggctcctgcgccgcccgagcctccccgacgagc
accgccccctcctccatggcaccaggtcccatccaccgcccaagggctgaggagtgcgga
cgcaaggtgcaggactggcaggcagccccacctgcaaccctggtgtgggatccacttggt
gaagccagctggactccagagtctagtggggacttagagaacctttatgtctag

>gi568815596f:38381851_38582801|GENSCAN_predicted_peptide_2|205_aa
MWGAPLPRHPVWDVRSASTRPRPRLGDEGEEKDKTKHSPEILAYKSEKNYFLATCARHQT
WARHLLAMGEQLERSQMCLHSIARKPDVKKHCKCDDFCKYSLEPDCGPELSSEAMLWDKA
TSKTIMSSSWCCQKKELLDKVNESVLTKISVFSQSIRTAPRKEWLILPGNIEKDIFEDVG
FKLSLEKLLWLRKMGQEYTTTLKPV

>gi568815596f:38381851_38582801|GENSCAN_predicted_CDS_2|618_bp
atgtggggagcgcctctgccccgccaccccgtctgggatgtgaggagcgcctctacccgg
ccgcgaccccgtctgggagatgaaggggaagaaaaagataaaaccaaacacagcccagaa
attctggcatacaaatcagaaaagaactacttcttagccacctgtgccagacaccaaaca
tgggccagacacttgctagccatgggagagcagctagaaagaagtcaaatgtgcctgcac
agcatagcaagaaaaccagatgtgaaaaagcattgcaagtgtgatgatttctgcaagtat
tcactagagcccgactgtggcccagagctgtcctcagaggctatgctgtgggacaaggcc
acaagcaaaactataatgagctcttcctggtgttgccagaaaaaagaactcttggataag
gtcaacgaatctgtccttacaaagatctctgtgttttcacagagcatcaggacagcccca
agaaaggagtggctaattcttcctgggaacattgaaaaggatatcttcgaggacgtgggt
tttaaactaagtcttgagaagctcctttggctgagaaaaatgggtcaggaatatacaact
acgctaaaaccagtctga

>gi568815596f:38381851_38582801|GENSCAN_predicted_peptide_3|151_aa
MVFRYVGRACLELLTSGQSCDLVEGVEDSQLEELPTTSLSKVLQTMKVIPEVTLEPKQIA
VASVSLTPCGNGSFSPSLLPPATGLEDKDKHFILSESCLKIESWRSGLDAVPTGRAKGIQ
RHHEDTGVQEKRPPEEGRECRGAKYHWGPEL

>gi568815596f:38381851_38582801|GENSCAN_predicted_CDS_3|456_bp
atggtgtttcgctatgttggccgggcttgtcttgaactcctgacctcaggccaaagctgt
gatttggtagaaggagtggaggactcgcagctggaagagctgccaaccacttcactttcc
aaagtattgcaaaccatgaaagttatccctgaagttactttggaacctaagcagatagct
gtggcctctgtctccctgacgccctgcggaaatggctcctttagtccttccctgctgcca
cctgccactggactggaagacaaggataaacatttcattctctcagaatcctgtttgaaa
atagaatcctggaggtcaggcctggatgctgtgccaacggggagagctaaaggtatccag
cggcaccatgaggacactggtgtccaagagaagaggccaccagaggagggcagggaatgc
agaggggcaaagtaccactgggggcctgaactatag

>gi568815596f:38381851_38582801|GENSCAN_predicted_peptide_4|317_aa
MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM
MRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE
VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI
SPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHS
IINGYKRVLALSVETDYTFPLAENVKAFLADPSAFVAAAPVAADTTAAPAAAAAPAKVEA
KEESEESDEDMGFGLFD

>gi568815596f:38381851_38582801|GENSCAN_predicted_CDS_4|954_bp
atgcccagggaagacagggcgacctggaagtccaactacttccttaagatcatccaacta
ttggatgattatccaaaatgtttcatcgtgggagcagacaatgtgggctccaagcagatg
cagcagatccgcatgtcccttcgcgggaaggtcgtggtgctgatgggcaagaacaccatg
atgcgcaaggccatccgagggcacctggaaaacaacccagctctggagaaactgctgcct
catatctgggggaatgtgggctttgtgttcaccaaggaggacctcactgagatcagggac
atgttgctggccaataaggtgccagctgctgcccgtgctggtgccattgccccatgtgaa
gtcactgtgccagcccagaacactggtctcgggcccgagaagacctcctttttccaggct
ttaggtatcaccactaaaatctccaggggcaccattgaaatcctgagtgatgtgcagctg
atcaagactggagacaaagtgggagccagcgaagccacgctgctgaacatgctcaacatc
tcccccttctcctttgggctggtcatccagcaggtattcgacaatggcagcatctacaac
cctgaagtgcttgataaaacagaggaaactctgcattctcgcttcctggagggtgtccgc
aatgttgccagtgtctgtctgcagactggctacccaactgttgcatcagtaccccattct
atcatcaacgggtacaaacgagtcctggccttgtctgtggagacggattacaccttccca
cttgctgaaaatgtcaaggccttcttggctgatccatctgcctttgtggctgctgcccct
gtggctgctgacaccacagctgctcctgctgctgctgcagccccagctaaggttgaagcc
aaggaagagtcggaggagtcggacgaggatatgggatttggtctctttgactaa

>gi568815596f:38381851_38582801|GENSCAN_predicted_peptide_5|284_aa
MGYIKCGNLNTSNIKKGEGNSKNMEGQNCDRSAHSRGVVEDKAKAQGGGEEVGGHNPKGD
GPWTLAWRIFSAKEGDPGGSLAVRAAQACHPDRASSEPAAPPLINPLTLVKNACADPQSL
VLPSCSLVLGKGGTTVETEEYFGGLAGGRVFTVVQKEIWKACGTSYLYQVGRRDCICYRT
KKANLPGQETEALGKVEVARGLTVNCARIGGQEPSLLEEDPPRIPSRMPSLGKTGGVSPG
PSPRSPEGGLGECGAVGDLKANRDEVPSGALNVGLMRSVLQKDE

>gi568815596f:38381851_38582801|GENSCAN_predicted_CDS_5|855_bp
atggggtacatcaaatgtggaaaccttaacaccagcaacatcaagaagggggaaggcaac
agtaaaaacatggaaggccagaactgcgaccgctccgcgcactcccggggcgtggttgag
gacaaagccaaagcccagggtggcggggaggaggtgggcggccacaaccccaagggagat
gggccttggaccttagcctggaggatcttctccgctaaggagggagacccaggaggctcg
ctcgcggtccgcgcagcccaggcctgccaccctgaccgcgcctcctcggagcccgcagct
ccacctttgatcaaccctcttacgcttgtgaagaacgcatgtgctgacccccagagcctg
gtcctgccgagctgctccctggtgctggggaaaggtggcacaactgtagagacagaagag
tattttgggggcctggcagggggcagagtgttcacggtggtccagaaggagatctggaag
gcctgcggaacgtcctacctgtaccaggtgggccggcgggactgcatttgctaccggacc
aagaaggcaaatctccctgggcaggaaactgaagctcttgggaaggtggaagttgcacgt
ggtctcacagtcaactgtgccagaataggaggccaggaaccatctctgctggaggaagac
ccaccacgcatcccttcaagaatgccaagcttgggaaagacaggtggagtctcccctggc
cccagccccaggtccccagaaggtggtctgggggagtgtggagcagttggagatttgaag
gcaaatcgtgatgaggtccccagtggagcactgaatgtggggttgatgagaagcgtcctt
cagaaggatgaatag

>gi568815596f:38381851_38582801|GENSCAN_predicted_peptide_6|93_aa
IEERVARDKPFWENTLLRLDMMAMLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTD
AVEALTALNHYQIRVPNLLDGHSGSHLAYTLEG

>gi568815596f:38381851_38582801|GENSCAN_predicted_CDS_6|282_bp
atagaggaaagggtcgccagagacaagccattttgggagaacacccttcttcgtttagac
atgatggctatgttgtgtaatgaccatgaagttcttacattcatcaaatataaagtgttt
gatgcaaaaccttcagccaaaacactttctgggctattagaatgggagtgcaaaactgat
gcagtagaagcccttacggcactgaatcactatcagataagagtgccgaatttgctggac
ggccacagtggctcacaccttgcctatactttggaaggctga