GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:38:44

Sequence gi568815596f:72817952_73033951 : 216000 bp : 47.75% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -   7944   7847   98  0  2   89   80   177 0.735  16.79
 1.00 Prom -  18880  18841   40                              -4.56

 2.00 Prom +  29497  29536   40                              -2.26
 2.01 Init +  33078  33219  142  2  1   46   50   111 0.225   3.40
 2.02 Term +  57242  57426  185  0  2   71   51   109 0.674   3.21
 2.03 PlyA +  58571  58576    6                               1.05

 3.00 Prom +  66571  66610   40                              -4.26
 3.01 Init +  69482  69785  304  1  1   84   94   591 0.975  54.74
 3.02 Intr +  70363  70653  291  2  0   44   96   344 0.968  27.91
 3.03 Term +  73396  73586  191  2  2  129   46   347 0.999  32.21
 3.04 PlyA +  74185  74190    6                               1.05

 4.00 Prom +  79741  79780   40                              -3.86
 4.01 Init +  99902 100421  520  1  1   26   96   799 0.396  67.53
 4.02 Intr + 102128 102559  432  0  0   39  -68   363 0.036   9.42
 4.03 Intr + 103074 103172   99  1  0   98   16    91 0.042   2.98
 4.04 Intr + 106358 106542  185  0  2    1   89   413 0.067  32.21
 4.05 Intr + 107657 107752   96  1  0  119    2    63 0.404   1.01
 4.06 Term + 115836 116003  168  2  0   94   46   352 0.999  29.48
 4.07 PlyA + 116375 116380    6                               1.05

 5.07 PlyA - 116555 116550    6                              -3.64
 5.06 Term - 119434 119311  124  0  1  124   55    91 0.742   7.26
 5.05 Intr - 127148 127075   74  2  2  144   62    84 0.907   9.60
 5.04 Intr - 143297 143180  118  1  1  136   78    97 0.947  13.97
 5.03 Intr - 150582 150497   86  0  2  116   81   176 0.926  18.32
 5.02 Intr - 153734 153619  116  0  2  121   44   215 0.904  20.57
 5.01 Init - 154124 154001  124  2  1   74  123    34 0.692   6.05
 5.00 Prom - 159584 159545   40                              -3.56

 6.11 PlyA - 163995 163990    6                               1.05
 6.10 Term - 165169 165039  131  2  2  102   44    69 0.119   2.24
 6.09 Intr - 170397 170307   91  0  1   80   82    73 0.648   5.47
 6.08 Intr - 181063 180998   66  1  0   95   68    84 0.774   6.20
 6.07 Intr - 182536 182480   57  1  0   97  105    87 0.952  10.38
 6.06 Intr - 183627 183574   54  0  0  121   92    24 0.786   5.28
 6.05 Intr - 185513 185388  126  2  0   51   98    36 0.616   1.78
 6.04 Intr - 188228 188029  200  0  2   86   51    95 0.827   4.67
 6.03 Intr - 204625 204571   55  1  1   96  115    58 0.983   7.85
 6.02 Intr - 205263 205237   27  0  0  108   89     8 0.690   1.21
 6.01 Init - 206532 206446   87  0  0   86   64    74 0.929   3.44

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 106213 106542  330  0  0   93   89   380 0.819  33.91


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:72817952_73033951|GENSCAN_predicted_peptide_1|33_aa
MAEAESLETAAEHERILREIESTDTACIGPTLS

>gi568815596f:72817952_73033951|GENSCAN_predicted_CDS_1|99_bp
atggcggaggcggagagcctggagacagcggcagagcacgagcggatcctgcgagagatc
gagagcactgacacggcctgcatcgggcccacgctcagn

>gi568815596f:72817952_73033951|GENSCAN_predicted_peptide_2|108_aa
MHGCLERPSSIHSCTNGGFLGHSLDVEAEYTGSSMVCPQDEKEETHTATLAADYMVPTQI
EGGSASPSPLTQTLISFGNTLTDTQEQYFASFDPIKLTLSINHHNICI

>gi568815596f:72817952_73033951|GENSCAN_predicted_CDS_2|327_bp
atgcatggatgccttgaacgtccaagctccatccacagctgcacaaacggcggcttcctt
ggccactctttagatgtagaggctgaatataccggcagcagcatggtctgccctcaggat
gagaaggaagagacccacacagccacactggcagctgattacatggtgcccacccagatt
gagggtgggtcagcctctcccagtccactgactcaaacgttaatctcctttggcaacacc
ctcacagacacccaggaacaatactttgcatccttcgatccaatcaagttgacactcagt
attaaccatcacaacatctgcatctga

>gi568815596f:72817952_73033951|GENSCAN_predicted_peptide_3|261_aa
MEGGLGRAVCLLTGASRGFGRTLAPLLASLLSPGSVLVLSARNDEALRQLEAELGAERSG
LRVVRVPADLGAEAGLQQLLGALRELPRPKGLQRLLLINNAGSLGDVSKGFVDLSDSTQV
NNYWALNLTSMLCLTSSVLKAFPDSPGLNRTVVNISSLCALQPFKGWALYCAGKAARDML
FQVLALEEPNVRVLNYAPGPLDTDMQQLARETSVDPDMRKGLQELKAKGKLVDCKVSAQK
LLSLLEKDEFKSGAHVDFYDK

>gi568815596f:72817952_73033951|GENSCAN_predicted_CDS_3|786_bp
atggagggcgggctggggcgtgctgtgtgcttgctgaccggggcctcccgcggcttcggc
cggacgctggccccgctcctggcctcgctgctgtcgcccggctccgtgcttgtccttagc
gcccgcaacgacgaggcactgcgccagctggaggccgagctgggcgccgagcggtctggc
ctgcgcgtggtgcgggtgcccgccgacctgggcgccgaggccggcttgcagcagctgctc
ggcgccctgcgcgagctcccccggcccaaggggctgcagcgactgctgcttatcaacaac
gcgggctctcttggggatgtgtccaaaggcttcgtggacctgagtgactccactcaagtg
aacaactactgggcactgaacttgacctccatgctctgcctgacttccagcgtcctgaag
gccttcccggacagtcctggcctcaacagaaccgtggttaacatctcgtccctctgtgcc
ctgcaacctttcaaaggctgggcgctgtactgtgcaggaaaggctgctcgtgatatgctg
ttccaggtcctggcgctggaggaacctaatgtgagggtgctgaactatgccccaggtcct
ctggacacagacatgcagcagttggcccgggagacctccgtggacccagacatgcgaaaa
gggctgcaggagctgaaggcaaaggggaagctggtggattgcaaggtgtcagcccagaaa
ctgctgagcttactggaaaaggacgagttcaagtctggagcccacgtggacttctatgac
aaataa

>gi568815596f:72817952_73033951|GENSCAN_predicted_peptide_4|499_aa
MCLAGCTPRKAAAPGRGALPRARLPRTAPAAATMFQPAAKRGFTIESLVAKDGGTGGGTG
GGGAGSHLLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLYGGPELVFP
EAMNHPALTVHPAHQLGASPLQPPHSFFGAQHRDPLHFYPWVLRNRFFGHRFQAVQLVRS
RHPGPHPRLRIQPLTPSAPRFLPPGAEGRGRLERNPAPALSVSSQARRINPSQNPLGNCR
RFLSHQSQRVRYRVAQTVGFFPQEPSLDAEMEPSVAAFSDPEIRWALKDFSNPVALLLRG
PSSPLQTDALPGGSTPSTLGPSAQPSGPEPLAGGGLSSEDCGSKTAARTPASDVPQDGLL
LHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQSRPYYTTV
PSQVPGSEKMPGMGGSRSLPLAARVKVWFQNRRTKYKRQKLEEEGPESEQKKKGSHHINR
WRIATKQANGEDIDVTSND

>gi568815596f:72817952_73033951|GENSCAN_predicted_CDS_4|1500_bp
atgtgcctggctgggtgcacaccccgcaaggcggcggcgccaggacgcggagcgctcccc
agagcccggctgcctcgcacagctcccgcggctgcgaccatgttccagcccgcggccaag
cgcggctttaccatagagtccttggtggccaaggacggcggcaccggcgggggcactggc
ggcgggggcgcgggctcccatctcctggcggcggccgcctccgaggaaccgctccggccc
acggcgctcaactaccctcaccccagcgcggccgaggcggccttcgtgagtggcttccct
gccgcggccgccgcgggcgcgggccgctcgctctacggtgggcccgagctcgtgttcccc
gaggccatgaaccaccccgcgctgaccgtgcatccggcgcaccagctgggcgcctccccg
ctgcagcccccgcactccttcttcggcgcccagcaccgggaccctctccatttctacccc
tgggtcctgcggaaccgcttcttcggccaccgcttccaggccgttcagcttgtccggagt
cggcatcctgggccgcaccctcggcttcgaatccagcccctgacgccctccgcaccgcgg
ttcctgcctccgggcgccgagggccgggggcgcctggagagaaatccagctccggctctg
agcgtctccagtcaggcgaggcggataaatccttcgcaaaaccctcttggaaattgccgc
cgcttcctgagccatcagtcccagcgggtacgttatcgagtagcacaaacagttggattt
ttccctcaagaaccgagtctggacgcggagatggagccaagtgtggctgcattttcggac
ccggaaatccgttgggcactgaaggacttttcgaaccctgtagcgctgttgcttcgcggt
ccatcgtcgccgctgcagacggatgcgctccccggcggctctacgccctccaccctaggg
ccctccgcccagccgtccggccctgagcccctggccggcggcggcctctccagcgaagac
tgcggctcgaagactgcagctcggaccccggccagcgacgtgccccaggacgggctgctt
ctgcacggccccttcgcacgcaagcccaagcggatccgcacggccttctcgccctcgcag
ctgctgcggctggagcgcgccttcgagaagaaccactacgtggtgggcgccgagcggaag
cagctggccggcagtctcagcctctccgagacgcagtctcgaccctactacaccaccgtc
ccctcccaagtcccgggcagtgagaagatgcccggcatggggggcagccggagcctccct
ttagcagccagagtgaaggtgtggttccagaaccggaggacaaagtacaaacggcagaag
ctggaggaggaagggcctgagtccgagcagaagaagaagggctcccatcacatcaaccgg
tggcgcattgccacgaagcaggccaatggggaggacatcgatgtcacctccaatgactag

>gi568815596f:72817952_73033951|GENSCAN_predicted_peptide_5|213_aa
MVEHQASGSGGMRLQVREPSQMDTHFACLVGLPWRRGKQPLASANICNVVLMRYGELEEG
IDVLDSDGNLVGSSKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLL
LPVQSLVCLAAFGLALPLAISLFPQMSEIETSQLEPEIAQATSSRTVVYNKGLDALEQGY
SRGLWALAGSLWAEPGSLSQSALMPPGKRSQHV

>gi568815596f:72817952_73033951|GENSCAN_predicted_CDS_5|642_bp
atggtggaacatcaggcctcggggtcaggggggatgcgacttcaggtcagagagccctcc
cagatggacacccactttgcctgcctagtgggcttgccctggaggagaggaaagcagccc
ctcgccagtgccaatatctgcaatgtggtcctgatgcggtacggggagctggaggaaggg
attgatgtcctggacagcgatggcaacctcgtgggctcctccaagatcgcagcccgacac
gccctgctggagacggcgctgacgcgagtggtcctgcccatgcccatcctggtgctaccc
ccgatcgtcatgtccatgctggagaagacggctctcctgcaggcacgcccccggctgctc
ctccctgtgcaaagcctcgtgtgcctggcagccttcggcctggccctgccgctggccatc
agcctcttcccgcaaatgtcagagattgaaacatcccaattagagccggagatagcccag
gccacgagcagccggacagtggtgtacaacaaggggttggatgccctggagcagggctac
agcagaggcctgtgggccctggccggctccctctgggcagagcccggttcacttagccag
agcgccttgatgcctcctgggaagcggtcccagcacgtgtga

>gi568815596f:72817952_73033951|GENSCAN_predicted_peptide_6|297_aa
MGSPFVAQGGLILGSAILLLWPPKVLGLQLWSAQKIKQAILHPDTNEKIFMPFRMSGICQ
GCLLVATSDAQQGKQEGMRPLSQGSELTRCHVLPRAVSQSKLDDQAEPKSEEINSFCDEA
VARRIIKGTLWCHGQCPGQQLSGKCSECYWAVSYDVPGGPSTVRGVVGLLLPNQTLASTV
FWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAVGLNVLVQKANKFTPA
TRLLIQRFVPFPAVGVAMAVLPKSGGPTPRSEHSSPGLIPCEQEAAVCTCGSLSWAL

>gi568815596f:72817952_73033951|GENSCAN_predicted_CDS_6|894_bp
atggggtctccctttgttgcccagggtggactgatcctgggctcagcaatcctcctgctt
tggcctcctaaagtgttgggactacagctctggagtgcacagaaaatcaagcaggctatt
ctacatccggacaccaatgagaagatcttcatgccatttagaatgtcagggatttgtcag
ggatgtcttctcgtggcaacctcagatgctcagcagggcaagcaggaaggcatgaggcct
ctgagccagggctcagaactgacacgctgccacgtcctcccacgtgctgtcagtcagagc
aagttagatgaccaagcagagccaaaaagtgaggaaataaattccttctgtgatgaggcc
gtggcaaggaggattataaagggaaccctgtggtgtcacgggcagtgtcctggacagcag
ttgtctggtaaatgcagtgagtgctattgggctgtatcttacgatgttcctggtggtcca
agtacagttcgaggggtagtcggtcttctcttgcccaaccagacactggcatccactgtc
ttctggcagtggctgaaccagagccacaatgcctgtgtcaactatgcaaaccgcaatgcg
accaagccttcacctgcatccaagttcatccagggatacctgggagctgtcatcagcgcc
gtctccattgctgtgggccttaatgtcctggttcagaaagccaacaagttcaccccagcc
acccgccttctcatccagaggtttgtgccgttccctgctgtaggagtggccatggcagtg
ctgcccaagtctggagggcctacccccaggtcagagcacagctccccaggcctcatcccc
tgtgagcaggaggcagcagtgtgcacctgtggcagcttgtcctgggccctgtga