GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:35:20

Sequence gi568815596f:100902702_101106071 : 203370 bp : 45.20% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2032   2085   54  1  0  125   94    71 0.929   9.49
 1.02 Intr +   6685   6772   88  1  1   98   52    16 0.489  -1.03
 1.03 Intr +  11235  11292   58  2  1  105   37    51 0.318   0.16
 1.04 Intr +  11546  11675  130  0  1   98   40    60 0.213   1.95
 1.05 Intr +  22445  22593  149  2  2  101   58   234 0.812  21.58
 1.06 Intr +  29887  29988  102  2  0   88   81    79 0.975   7.35
 1.07 Intr +  30209  30300   92  0  2   86   52    65 0.947   2.41
 1.08 Intr +  35052  35141   90  2  0   59  117    68 0.897   6.99
 1.09 Term +  36779  36850   72  1  0   68   39    86 0.690  -0.39
 1.10 PlyA +  38540  38545    6                               1.05

 2.06 PlyA -  39141  39136    6                               1.05
 2.05 Term -  40458  40167  292  2  1   80   53   201 0.899  10.62
 2.04 Intr -  40817  40778   40  0  1   68   39    83 0.510  -1.32
 2.03 Intr -  46304  46173  132  0  0   61   77    81 0.273   4.92
 2.02 Intr -  48968  48912   57  0  0   92  103     3 0.207   1.06
 2.01 Init -  50504  50456   49  2  1   86   58    32 0.179  -0.89
 2.00 Prom -  52453  52414   40                              -2.06

 3.00 Prom +  58887  58926   40                              -0.56
 3.01 Init +  61757  61773   17  1  2   66   72     6 0.245  -4.44
 3.02 Intr +  62959  63065  107  1  2  105   84    87 0.879   9.86
 3.03 Intr +  63509  63667  159  0  0  126   20    31 0.286   0.06
 3.04 Intr +  65580  65727  148  1  1   50   86   250 0.601  20.29
 3.05 Intr +  68289  68373   85  0  1   65  107    30 0.422   2.42
 3.06 Intr +  72102  72243  142  2  1   83   76   112 0.909   9.43
 3.07 Intr +  72757  72866  110  2  2   22  131    40 0.087   1.70
 3.08 Intr +  75009  75098   90  2  0  104  109    12 0.799   5.09
 3.09 Intr +  79530  79676  147  2  0    5   58   248 0.670  13.93
 3.10 Intr +  80037  80267  231  2  0   74   26   101 0.414   0.47
 3.11 Intr +  85378  85575  198  0  0   80   99   131 0.577  12.95
 3.12 Intr +  87693  87745   53  2  2   93   96    95 0.274   8.51
 3.13 Intr +  88079  88171   93  2  0   59   70    67 0.645   1.08
 3.14 Intr +  90646  90826  181  1  1   79   94   162 0.997  15.77
 3.15 Intr +  92699  92833  135  1  0  122   44    41 0.299   3.86
 3.16 Intr +  99058  99186  129  0  0   87  -20   122 0.236   2.19
 3.17 Intr + 100001 100107  107  1  2   71   65   205 0.964  15.51
 3.18 Intr + 101457 101582  126  0  0   56   43   209 0.998  12.99
 3.19 Intr + 103258 103370  113  1  2   54  106   124 0.996  10.82
 3.20 Term + 103649 103680   32  0  2   70   37    71 0.977  -1.78
 3.21 PlyA + 103699 103704    6                               1.05

 4.19 PlyA - 103923 103918    6                              -1.75
 4.18 Term - 105572 105120  453  2  0   64   43   307 0.990  18.96
 4.17 Intr - 108325 108228   98  2  2   99   80   129 0.990  12.93
 4.16 Intr - 119820 119580  241  0  1   51   76   341 0.157  26.32
 4.15 Intr - 124750 124682   69  1  0   55  107    90 0.821   6.98
 4.14 Intr - 125445 125314  132  0  0  113   24   174 0.623  14.34
 4.13 Intr - 125731 125602  130  0  1   13   82   162 0.981   8.80
 4.12 Intr - 127075 126790  286  2  1   98   80   345 0.871  31.10
 4.11 Intr - 129684 129567  118  0  1   42   22   260 0.686  14.84
 4.10 Intr - 131057 130843  215  0  2   47   67   253 0.856  17.53
 4.09 Intr - 133467 133317  151  0  1   35  115   173 0.994  14.44
 4.08 Intr - 135007 134831  177  1  0  123   64   163 0.995  17.52
 4.07 Intr - 135954 135649  306  0  0   90   23   446 0.500  34.95
 4.06 Intr - 137684 137477  208  1  1  119   59   201 0.974  19.38
 4.05 Intr - 147940 147700  241  2  1   86   52   426 0.331  35.41
 4.04 Intr - 151635 151407  229  0  1   56  111   297 0.864  26.24
 4.03 Intr - 156838 156726  113  2  2   80   98    62 0.519   6.50
 4.02 Intr - 187663 187508  156  2  0   72  105    72 0.712   7.28
 4.01 Intr - 187757 187692   66  0  0   59   55    84 0.131   1.08

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 159142 158974  169  1  1   70   59    59 0.855   0.35
S.002 Term + 171504 171602   99  2  0   84   42    86 0.862   1.73
S.003 Sngl + 196564 196914  351  0  0   81   38   162 0.962   6.55


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:100902702_101106071|GENSCAN_predicted_peptide_1|278_aa
XKNCIENLMDEDEKDRAKRESNVAKKRDCSRFICTISLDINSVGLKAKASQKDLIPIPAT
AMHLGQLAFLKYHRHSPFVRVWGYCARTRLDPELQVQPSSGFQSSRELRLRASRNKSEKK
RRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHNGGNYLIPTVDDGVRHVDIQG
HGTTCKGRHHSHREEVSAQTEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTDGSI
IYVSDSITPLLGHLPEASDGADTMNTEVIPIITPEKLG

>gi568815596f:100902702_101106071|GENSCAN_predicted_CDS_1|837_bp
nngaaaaactgcatagaaaatctaatggatgaagatgagaaagacagagccaagagggag
agtaatgtggcaaagaagagagactgttctcgtttcatttgtaccatttctttggatata
aattctgtaggtctgaaagcaaaggcctctcagaaggacctgatccccatcccagctaca
gccatgcatcttgggcagctggccttcctgaaataccacagacacagcccctttgtaaga
gtatggggctactgtgctaggactcgcttggatcctgagctgcaagtacaaccctcctct
ggattccagagttctagagagctacgcctgagagcttctcgaaacaagtctgagaagaag
cgtcgggaccagttcaatgttctcatcaaagagctcagttccatgctccctggcaacacg
cggaaaatggacaaaaccaccgtgttggaaaaggtcatcggatttttgcagaaacacaat
ggtggtaactacctaattccaactgttgacgatggagttcgtcatgtagacattcagggc
catggtaccacctgcaagggcaggcaccacagccatagagaagaagtctcagcgcaaacg
gaaatctgtgacattcagcaagactggaagccttcattcctcagtaatgaagaattcacc
cagctgatgttggaggcattagatggcttcattatcgcagtgacaacagacggcagcatc
atctatgtctctgacagtatcacgcctctccttgggcatttaccggaagctagtgatggg
gctgacaccatgaatacagaagtgatccccatcatcaccccagagaagctgggctga

>gi568815596f:100902702_101106071|GENSCAN_predicted_peptide_2|189_aa
MGFRHVGQAGFKLLTSAPGTHHSTFCFYEFGYGTSLKSDVRQDRLFMENGHRLALMQAAL
LPHAIVYASLSDPWFTRHQVSAVESSDIRITLGADWCHHYGIILVLLSKGGGRTSLNPAI
LHLVSPPGMLANVHQETLQDVHGSTFQESLTGMNAGIAAHSYDGTHPAIRRAHSSYICQC
EADAKHKRC

>gi568815596f:100902702_101106071|GENSCAN_predicted_CDS_2|570_bp
atggggtttcgccatgttggccaggctggtttcaaactcctgacctcagcccctggcact
caccattctactttctgtttctatgaatttggctatggtacctcattaaaatcagatgta
cgacaggacagattattcatggaaaatggacacaggcttgcactgatgcaagcagctttg
ctacctcatgcaattgtgtatgcttcattaagtgacccgtggttcacgaggcatcaagtg
tcagctgtggagtcttcagacatccgcattaccctaggggcagactggtgccaccactat
ggcatcattctggtgttacttagtaaaggtggaggcagaacttccctcaacccagccatt
ctacatctagtcagtcctccagggatgcttgcaaacgttcatcaggaaacactacaggat
gttcatggaagcaccttccaagaatccctaactgggatgaatgcaggaattgcagcacat
tcctacgatggaacacacccagcaataagaagagcccacagcagctacatctgccagtgt
gaggcagatgcgaagcacaaacgatgttga

>gi568815596f:100902702_101106071|GENSCAN_predicted_peptide_3|800_aa
MQARPGAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHRQVFWESQKWVTLWDVVGA
LKGMYTAYWGTQEDPHSWGSGKALCHIRGEHISKLMQFGKGKSCCYRFLTKGQQWIWLQT
HYYITYHQWNSKPEFIVCTHSVVSYADVRVERRQELALEDPPSEALHSSALKDKGSSLEP
RQHFNTLDVGASGLNTSHSPSASSRSSHKSSHTAMSEPTSTPTKLMAEASTPALPRSATL
PQELPVPGLSQAATMPAPLPSPSSCDLTQQLLPQTVLQSTPAPMAQFSAQFSMFQTIKDQ
LEQRTRILQANIRWQQEELHKIQEQLCLVQDSNVQLPAQAAIRRRWKQLCCFSSNAGIQG
DVGNDDIHITAYWRLQRELGGSPFVVCQQGSSAKPSSSSSHCDPQILELFGEMFLQQPAV
SLSFSSTQRPEAQQQLQQRSAAVTQPQLGAGPQLPGQISSAQVTSQHLLRESSVISTQDA
SQCQPSPDFSHDRQLRLLLSQPIQPMMPGSCDARQPSEVSRTGRQVKYAQSQTVFQNPDA
HPANSSSAPMPVLLMGQAVLHPSFPASQPSPLQPAQARQQPPQHYLQVQAPTSLHSEQQD
SLLLSTYSQQPGTLGYPQPPPAQPQPLRPPRRVISNTLGHPRTGTTRQPCGSTAQDSHDW
QSCAGPARRKHLQRRMAPAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRA
LKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTL
VTYVPVTTFKNLQTVNVDEN

>gi568815596f:100902702_101106071|GENSCAN_predicted_CDS_3|2403_bp
atgcaggccaggcctggagcacctccaatcataggatacctgccttttgaagtgctggga
acctcaggctatgactactaccacattgatgacctggagctcctggccaggtgtcaccag
caccggcaggtcttctgggaaagccagaaatgggtgactttgtgggatgtggtcggtgca
ttgaaggggatgtacacagcatactgggggactcaagaggaccctcacagctggggttca
gggaaggctctttgccacatacgaggcgaacacattagcaaattgatgcagtttggcaaa
gggaagtcgtgttgctaccggtttctgaccaaaggtcagcagtggatctggctgcagact
cactactacatcacctaccatcagtggaactccaagcccgagttcatcgtgtgcacacac
tcggtggtcagttacgcagatgtccgggtggaaaggaggcaggagctggctctggaagac
ccgccatccgaggccctccactcctcagcactaaaggacaagggctcaagcctggaacct
cggcagcactttaacacactcgacgtgggtgcctcgggccttaataccagtcattcgcca
tcggcgtcctcaagaagttcccacaaatcctcgcacacagccatgtcagaacccacctcc
actcccaccaagctgatggcagaggccagcaccccggctttgccaagatcagccaccctg
ccccaagagttacctgtccccgggctcagccaggcagccaccatgccggcccctctgcct
tccccatcgtcctgcgacctcacacagcagctcctgcctcagaccgttctgcagagcacg
cccgctcccatggcacagttttcggcacagttcagcatgttccagaccatcaaagaccag
ctagagcagcggacgcggatcctgcaggccaatatccggtggcaacaggaagagctccac
aagatccaggagcagctctgcctggtccaggactccaacgtccagctcccagcccaggct
gccatcaggaggagatggaagcagctctgttgtttctcatccaacgcaggcatccaggga
gatgtgggaaatgatgatatccatatcacagcctactggagactgcagagggagctgggt
ggctccccatttgtggtgtgccagcagggaagctctgcaaagcctagcagcagcagctct
cactgtgacccccagatattagaattgtttggagagatgttcctgcagcagccagctgta
tccctgagcttcagcagcacccagcgacctgaggctcagcagcagctacagcaaaggtca
gctgcagtgactcagccccagctcggggcgggcccccaacttccagggcagatctcctct
gcccaggtcacaagccagcacctgctcagagaatcaagtgtgatatcaacccaggatgcc
agccagtgccagcccagcccagacttcagccatgatcggcagctcaggctgttgctgagc
cagcccatccagcccatgatgcccgggtcctgtgacgcaaggcagccctcggaagtcagc
aggacgggacggcaagtcaagtacgcccagagccagaccgtgtttcaaaatccagacgca
caccccgccaacagcagcagcgccccgatgcccgtcctgctgatggggcaggcggtgctc
caccccagcttccctgcctcccaaccatcgcccctgcagcctgcacaggcccggcagcag
ccaccgcagcactacctgcaggtacaggcaccaacctctttgcacagtgagcagcaggac
tcgctacttctctccacctactcacaacagccagggaccctgggctacccccaaccaccc
ccagcacagccccagcccctacgtcctccccgaagggtcatatccaacacactgggccac
ccacgcacagggacgacgcgacagccctgtggctccaccgcacaggacagccacgactgg
caatcctgtgccggccctgctcgacgcaagcacctccagcgccggatggctcccgcaaag
aagggtggcgagaagaaaaagggccgttctgccatcaacgaagtggtaacccgagaatac
accatcaacattcacaagcgcatccatggagtgggcttcaagaagcgtgcacctcgggca
ctcaaagagattcggaaatttgccatgaaggagatgggaactccagatgtgcgcattgac
accaggctcaacaaagctgtctgggccaaaggaataaggaatgtgccataccgaatccgt
gtgcggctgtccagaaaacgtaatgaggatgaagattcaccaaataagctatatactttg
gttacctatgtacctgttaccactttcaaaaatctacagacagtcaatgtggatgagaac
taa

>gi568815596f:100902702_101106071|GENSCAN_predicted_peptide_4|1129_aa
XWSPDSDHMPHTHEELASPMLTGRLVGALDAVLDSNARVAPFRILLQVPGSQVYSPIACG
ELLNGSDVYWAIATGATLEEINQHWDWLEQNLLHTLSVFDNKDDIASFVKGKALIAEETS
SRLAEQEEEPEKFREALVKFEARFNFPEAEKLVTYYSCCCWKGRVPRQGWLYLSINHLCF
YSFFLGKELKLVVPWVDIQKLERTSNVFLTDTIRITTQNKERDFSMFLNLDEVFKVMEQL
ADVTLRRLLDNEVFDLDPDLQEPSQITKRDLEARAQNEFFRAFFRLPRKEKLHAVVDCSL
WTPFSRCHTTGRMFASDSYICFASREDGCCKIILPLREVVSIEKMEDTSLLPHPIIVSIR
SKVAFQFIELRDRDSLVEALLARLKQVHANHPVHYDTSADDDMVWSLQTLMIPFFMSQAV
VSKGEYTWGEPCGDEKNAGPASLVFHSTSMCSDHRFGDLEMMSSQNSEESEKEKSPLMHP
DALVTAFQQSGSQSPDSRMSREQIKISLWNDHFVEYGRTVCMFRTEKIRKLVAMGIPESL
RGRLWLLFSDAVTDLASHPGYYGNLVEESLGKCCLVTEEIERDLHRSLPEHPAFQNETGI
AALRRVLTAYAHRNPKIGYCQSMNILTSVLLLYTKEEEAFWLLVAVCERMLPDYFNHRVI
GAQVDQSVFEELIKGHLPELAEHMNDLSALASVSLSWFLTLFLSIMPLESAVNVVDCFFY
DGIKAIFQLGLAVLEANAEDLCSSKDDGQALMILSRFLDHIKNEDSPGPPVGSHHAFFSD
DQEPYPVTDISDLIRDSYEKFGDQSVEQIEHLRYKHRIRVLQGHEDTTKQNVVGSRRLTP
VITLRVVIPEVSILPEDLEELYDLFKREHMMSCYWEQPRPMASRHDPSRPYAEQYRIDAR
QFAHLFQLVSPWTCGAHTEILAERTFRLLDDNMDQLIEFKAFVSCLGDAVDYQKQLKQMI
KDLAKEKDKTEKELPKMSQREFIQFCKTLYSMFHEDPEENDLYQAIATVTTLLLQIGEVG
QRGSSSGSCSQECGEELRASAPSPEDSVFADTGKTPQDSQAFPEAAERDWTVSLEHILAS
LLTEQSLVNFFEKPLDMKSKLENAKINQYNLKTFEMSHQSQSELKLSNL

>gi568815596f:100902702_101106071|GENSCAN_predicted_CDS_4|3390_bp
ncatggagtccagacagcgaccacatgcctcacacgcatgaggagctggccagccccatg
ctcacaggtcgcctggtcggcgctctggatgcagtgttggattccaatgcacgggtcgct
ccatttcgaattctgcttcaagttcccggctcccaggtttattctcccatagcatgtggt
gagttactgaatggatcagacgtttactgggccatagccactggtgcaacattagaggaa
atcaatcagcactgggactggctggaacaaaatctcctccacaccttgtctgtctttgat
aataaagatgacattgccagttttgtcaaagggaaggctctgatagccgaggagaccagc
agcaggctcgccgagcaggaggaggaacccgagaaattccgagaagccctggtgaagttc
gaggccaggttcaacttccccgaggcggagaagctggtcacctactactcctgctgctgt
tggaagggcagggtgccccgccagggctggctgtacctcagcatcaaccacctctgcttc
tactccttcttcctgggcaaggaacttaaacttgtggttccgtgggttgatatccagaaa
ttagaaagaacgtccaatgtctttctgacggataccatccgaatcaccacgcagaataag
gagcgtgacttctccatgttcctgaacctggatgaggtgtttaaggtcatggagcagctg
gccgacgtgacgctgcgaaggctgctggataatgaggtctttgacctcgaccccgatctg
caggagccgagccagatcaccaagagggacctggaagccagagcacagaatgagttcttc
cgggctttcttcaggttgccgaggaaggagaagctgcacgcggttgtggactgttcgctc
tggacgccgttcagtcgctgtcacaccacggggcggatgttcgcctctgacagctacatc
tgctttgccagcagagaagatggctgctgtaagatcatcctgccactcagagaggtggtg
agcatcgagaagatggaggacacgagcctgctgccgcatcccatcattgtcagtatcaga
agcaaggtggccttccagttcattgagctccgggaccgagacagcctggtggaggcgctg
cttgcgaggttgaagcaggtccacgccaaccaccccgtgcactacgacacctctgcggat
gatgacatggtatggtccctccagaccctgatgatccccttcttcatgtctcaggccgtg
gtctccaaaggggagtacacatggggagagccatgtggggatgagaagaatgcggggcct
gcttcactcgtgtttcattcaacaagcatgtgcagtgaccacagatttggggatcttgaa
atgatgtcttctcaaaatagcgaggagagtgagaaagagaagagcccgctgatgcacccc
gatgccctggtcaccgccttccagcagtcaggcagccagagccctgactcccgaatgtcc
agagaacagataaaaataagcctgtggaatgaccactttgtggaatacggcagaaccgtg
tgtatgtttcgcacagagaagattcggaagctcgtagccatgggcatccctgaatctttg
cgagggagactctggcttctcttctcagatgcggtgacggatcttgcctcacaccctggt
tactacgggaatctggtggaggagtccctggggaaatgctgcctggtaaccgaggagata
gaacgagacctgcaccgctccctgccagagcaccccgccttccagaacgaaacgggaatt
gctgctttgaggagagtcttgacggcctatgcccaccggaaccccaagattggatactgc
cagtccatgaacatcctgacctccgtgctgctgctgtacaccaaggaggaggaagccttc
tggctgttggttgctgtgtgtgagcggatgctgcccgattacttcaaccaccgagtgatc
ggggcacaagttgaccagtctgtcttcgaggagctcatcaagggtcatctcccagagctg
gcagagcacatgaacgacctctcagccctggcgtccgtctctctctcgtggttcctgacc
ctgttcctcagcatcatgcctctagagagtgcggtgaatgtggtagactgcttcttctat
gatggcatcaaagccatcttccagctgggactggctgtgcttgaggccaatgctgaggac
ctgtgcagcagcaaggatgatggccaggccttgatgatcctcagcaggtttctagatcac
attaagaatgaggacagcccagggcccccagttggcagccaccatgcctttttctccgac
gaccaggagccctaccctgtgactgatatttcggacctgatccgggattcctatgagaaa
tttggagaccagtctgtggagcagatcgagcacctacgttacaagcacaggatcagggtc
ctccaaggccacgaggacaccacaaagcagaacgtggtgggtagcagacgcctcaccccg
gtgatcacgcttcgagtcgttatcccggaagtctcaattcttcctgaagacctagaggag
ctctacgacttattcaagagagaacatatgatgagctgttactgggagcagcccaggccc
atggcctcacgccacgaccccagccggccctatgctgagcagtaccgcatagatgcccgg
cagtttgcacacctgtttcagctagtctcgccctggacctgcggggcccacacggagatc
ctcgccgaaaggacgttcaggctcttggatgacaacatggaccagctcatcgagttcaaa
gcgtttgtgagctgcctcggtgatgcagttgattatcagaaacagctgaagcagatgatt
aaggatttagccaaagaaaaagataaaactgagaaagaattgcccaaaatgagccagaga
gaatttatccagttctgtaaaactctgtacagtatgttccatgaagatccagaagaaaat
gatttgtatcaagccatcgccacagtcaccacactgctgctgcagatcggggaggtgggg
cagcgaggcagcagctctggaagctgctcccaggagtgtggggaggagctgcgggcttca
gctccttctcctgaggactcggtttttgcagacactgggaagacgccccaggactcccag
gcatttccagaggcggcagaaagggactggactgtctcccttgaacatattttagcttca
cttctgactgaacagtcattagtcaacttttttgaaaagccactggacatgaaatccaaa
cttgaaaatgccaagatcaatcagtacaatctcaaaacttttgaaatgagccaccaatca
caatctgaacttaagctgagtaacttgtag