GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:23:15

Sequence gi568815583f:66966155_67290533 : 324379 bp : 44.65% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -     88     83    6                               1.05
 1.07 Term -   1473   1177  297  0  0   32   49   168 0.392   2.57
 1.06 Intr -   4631   4284  348  2  0   94  115   133 0.450  12.15
 1.05 Intr -   9883   9811   73  0  1   90   64    39 0.390   1.11
 1.04 Intr -  11945  11867   79  0  1   68   88    32 0.647  -0.19
 1.03 Intr -  21108  21004  105  1  0   95   68    40 0.162   2.89
 1.02 Intr -  34930  34664  267  2  0   62   11   170 0.001   4.20
 1.01 Init -  54712  54580  133  1  1   78   47    83 0.011   3.50
 1.00 Prom -  54836  54797   40                              -2.46

 2.00 Prom +  62324  62363   40                              -3.96
 2.01 Init +  66860  66927   68  1  2   61  119    51 0.856   6.04
 2.02 Term +  67325  67445  121  2  1   55   39    99 0.671  -0.35
 2.03 PlyA +  70746  70751    6                               1.05

 3.00 Prom +  71639  71678   40                              -3.26
 3.01 Init +  78116  78250  135  1  0   51   53    94 0.031   2.58
 3.02 Intr +  98700  98874  175  2  1   47   62    59 0.121  -1.29
 3.03 Intr +  99999 100206  208  1  1   67   75   455 0.440  40.24
 3.04 Intr + 114582 114666   85  0  1   50   75    48 0.070  -0.48
 3.05 Term + 114756 114866  111  2  0  109   48    88 0.648   5.46
 3.06 PlyA + 117700 117705    6                               1.05

 4.12 PlyA - 124825 124820    6                               1.05
 4.11 Term - 125798 125717   82  1  1  105   41    28 0.361  -3.03
 4.10 Intr - 126494 126312  183  1  0   80   94    32 0.420   1.90
 4.09 Intr - 127996 127819  178  2  1   80   64    72 0.128   2.98
 4.08 Intr - 139299 139207   93  1  0   94   69    84 0.822   7.04
 4.07 Intr - 150532 150380  153  2  0   77   80    19 0.030   0.04
 4.06 Intr - 160094 160031   64  2  1   80   82    60 0.360   2.89
 4.05 Intr - 161149 161070   80  2  2  114   61     5 0.764  -0.33
 4.04 Intr - 164291 164154  138  0  0   46  109    87 0.175   7.04
 4.03 Intr - 171756 171560  197  2  2   88   93    38 0.114   3.36
 4.02 Intr - 175736 175661   76  0  1   86   99    13 0.041   0.77
 4.01 Init - 191653 191593   61  1  1   87   67    80 0.395   7.21
 4.00 Prom - 192849 192810   40                              -7.56

 5.00 Prom + 193349 193388   40                              -6.06
 5.01 Init + 195899 195921   23  1  2   74   82    13 0.414  -1.55
 5.02 Intr + 198741 198934  194  0  2  124   85   281 0.970  30.54
 5.03 Intr + 199099 199230  132  2  0   80   96   149 0.935  15.52
 5.04 Intr + 200625 200699   75  1  0   78   82   127 0.994  10.59
 5.05 Intr + 204400 204534  135  2  0   85  116    13 0.379   4.34
 5.06 Intr + 215087 215299  213  0  0   95   64   355 0.165  32.49
 5.07 Intr + 218573 218710  138  0  0   34   97   155 0.998  11.44
 5.08 Intr + 219082 219169   88  2  1   61   80    69 0.681   2.43
 5.09 Intr + 220866 220976  111  0  0   63   91    35 0.327   0.79
 5.10 Intr + 221188 221355  168  1  0   70   82   267 0.346  23.36
 5.11 Intr + 224259 224371  113  0  2  119   28    84 0.973   5.52
 5.12 Intr + 224988 225187  200  1  2   87  127    45 0.952   7.37
 5.13 Term + 232179 232364  186  2  0   93   54    34 0.083  -2.01
 5.14 PlyA + 234833 234838    6                               1.05

 6.10 PlyA - 235543 235538    6                               1.05
 6.09 Term - 236744 236667   78  2  0  119   38    79 0.889   3.76
 6.08 Intr - 242504 242408   97  1  1   65  106    33 0.307   2.81
 6.07 Intr - 254386 254335   52  2  1  112   79    28 0.337   2.27
 6.06 Intr - 265743 265660   84  1  0   61  115    90 0.971   8.79
 6.05 Intr - 269914 269825   90  2  0   53  115    73 0.988   6.47
 6.04 Intr - 270350 270254   97  2  1  104   91    34 0.998   4.88
 6.03 Intr - 270666 270476  191  1  2   55   71   110 0.976   5.30
 6.02 Intr - 281109 280881  229  0  1   53  113   165 0.476  12.94
 6.01 Init - 298074 298042   33  0  0   72   92    45 0.344   3.17
 6.00 Prom - 305883 305844   40                              -4.06

 7.03 PlyA - 305899 305894    6                               1.05
 7.02 Term - 307956 307849  108  0  0   19   46   132 0.798   0.61
 7.01 Init - 311216 311037  180  2  0   57   75    86 0.496   3.38
 7.00 Prom - 319428 319389   40                              -1.86


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 100678 100732   55  1  1  104   48    58 0.849   0.43


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:66966155_67290533|GENSCAN_predicted_peptide_1|433_aa
MEYYAAIKNDEFMSFVGTWMKLETIILSKLLQGQNTKHRMFSLIVPKRKAEGDAKADRAK
MKDKPQRRSTRFSTKPAPPKPEPKPKKAPAKKGEKVPKGKREKLRLARRGITLQKMEMPK
QTRHRKLKVLQMPKLDLYEKHSFVFSFLSPHPEWPEPKPAPSEKSLPPERAYKKICLSSP
ISTLDITIYHYECKRIGGKYWAPVGRLKMISVAARIKTQCWDYRHKRLCVACTCATLNPG
TFLPDNEEKIEHNCQQVIAQTYTTRGELLEVPLTDPDLNLYTDGSSFVEKGLGKVGYAVV
SNNGILESNPLTPGTSAQLAELIALTRALELEGKKKERNLLRGHESRHQLSAAAKSMRRN
VDKSQPLINRSNTKRGTSDIECITTIDSYQNNEPEFDHASDITTSFQEIQRIEEMLNKTI
IQQPAKTRMFEVL

>gi568815583f:66966155_67290533|GENSCAN_predicted_CDS_1|1302_bp
atggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatggatg
aagctggaaaccatcattctcagcaaactattgcaaggacaaaacaccaaacaccgcatg
ttctcactcatagtgcccaagagaaaggctgaaggtgatgctaaagcagatagagccaag
atgaaggacaaaccacagagaagatccacgaggttttctactaaacctgctcctccaaag
ccggagcccaaacctaaaaaggcccctgcaaagaagggagagaaggtaccaaaagggaaa
agggaaaagctgaggctggccaggaggggaataaccctgcagaaaatggagatgcccaaa
cagaccagacacagaaagctgaaggtgctgcagatgccaaaattagacctttacgagaag
cacagttttgtcttcagtttcctctccccccacccggaatggcctgagccgaagccagct
ccctccgagaagtcattaccgcctgaaagagcatacaagaaaatctgtttatcctcacca
atatcaacattagatattaccatttatcattacgaatgtaagagaattggaggaaaatac
tgggcacctgttggccggttaaaaatgattagcgtggccgccagaattaagactcagtgc
tgggattacaggcataagcgactgtgcgtggcctgcacttgtgcaactcttaacccagga
acatttcttccagacaatgaagaaaagatagaacataactgtcaacaggtgattgctcaa
acctacaccactcgaggggaacttctagaggttcccttgactgatcctgacctcaacttg
tatactgatgggagttcctttgtagaaaaaggacttggaaaagtggggtatgcagtggtc
agtaataatggaatacttgaaagtaatcctctcactccaggaactagcgctcagctggca
gaactaatagccctcactcgggcactagaattagaaggaaaaaagaaggaaaggaattta
ttaagaggccatgagtctaggcatcaattatcagcagctgctaaatccatgaggagaaat
gttgataagtctcaacccctgatcaatcgtagcaacacgaaaagagggacatctgacatt
gaatgcatcactacgatagattcttaccagaataatgaacctgaatttgatcatgcctct
gacataactaccagtttccaggaaatacagaggatagaggagatgttaaataaaaccata
atacagcaaccagccaagaccagaatgtttgaagttctctag

>gi568815583f:66966155_67290533|GENSCAN_predicted_peptide_2|62_aa
MEVPSPPGPFVHCFVCDAKKAVWAAESTDSPKEKGQVGRRRQTFAELPPRRKSTRGPWAA
EP

>gi568815583f:66966155_67290533|GENSCAN_predicted_CDS_2|189_bp
atggaagttccgtcaccacctggaccttttgttcactgctttgtctgcgatgccaagaaa
gctgtctgggcagcagaaagcacggactctccgaaggagaaaggccaggtgggaaggagg
cgccagaccttcgccgaattacctccccggagaaaatccacgcggggaccttgggcagca
gaaccctaa

>gi568815583f:66966155_67290533|GENSCAN_predicted_peptide_3|237_aa
MIHGSNLAKPCSVACHDLVQAHAVALLPTEHSGLERRLTLERAKENSTDVLEAHFLPGTR
FTRLKRPLAPAIVQVVTGVPSSPLLRTHFSPPPPPHTFPRLSAAMSSILPFTPPIVKRLL
GWKKGEQNGQEEKWCEKAVKSLVKKLKKTGQLDELEKAITTQNVNTKCITIPSAWNVPGP
LRSKHVAPNNPSLPTEFCREHIIYWKSGEGLEFSQLSNQTVAVGEAMSGELQGEQLE

>gi568815583f:66966155_67290533|GENSCAN_predicted_CDS_3|714_bp
atgatccacggcagtaacctggccaagccctgctcagtggcctgccatgatctggtccag
gcccacgctgttgccctcctgcccaccgaacattcaggactggagaggaggctcaccctg
gagcgggctaaggaaaactcaacagatgtccttgaggctcattttctgccgggcactcgg
ttcacaaggctcaagagacccctggctccagccattgtccaggttgtcactggtgtcccc
agctctccacttctgaggacccacttctcaccccctcctcctccgcacacgttcccgagg
ctctcggccgccatgtcgtccatcctgcctttcactcccccgatcgtgaagcgcctgctg
ggctggaagaagggcgagcagaacgggcaggaggagaaatggtgcgagaaggcggtcaag
agcctggtcaagaaactcaagaagacggggcagctggacgagctggagaaggccatcacc
acgcagaacgtcaacaccaagtgcatcaccatccccagtgcatggaatgtgccagggccg
ctgcggagcaagcacgtggccccgaataacccctccctgccaacggaattctgcagagaa
catataatttattggaagtctggagagggacttgagttctctcaactctccaaccagact
gttgctgtgggcgaggccatgtcgggtgagctccaaggagagcagttggaatga

>gi568815583f:66966155_67290533|GENSCAN_predicted_peptide_4|434_aa
MVVRATAKDVAMAEPKADGEGKLSWPQLRVCIGFSGALNPKFSCRRRALATPRQKKSKGR
TVLCKLVSNSSRKHQDILTCHSDPMGLLARLPEKIRLERNDAPQTKLVINKGGGALAVML
TCPPLTYYYETRFLTGRTRVSVHGPGVGDPWCKRRRSGGGTAETEGGDRKTKHLVDSSHS
TSDRSILTPGLTPRKMVPRRKEGYGGPTGFEEHFHTCSLSLSEVLQHLLSRLIAEPLGMI
PIIITAAPLYHTLLQPGALLTQQPGIFSASWTHRIQLKVQGFHCGRGGHPTQASGGPTAC
PEDPSTGLVVKGLEHWKCGPGKHRGHTKSPKTENAIRVQIPCLCPLGTLLSILPPASTRC
IIAYNHDCQAQMHISSPRRVYKIQTAGTALRVSDPRGLGAGPETLHSYLKAAASSKFWVT
SPSHCGFSAALSPV

>gi568815583f:66966155_67290533|GENSCAN_predicted_CDS_4|1305_bp
atggtggtgagagccacagccaaggatgtggccatggcagagcccaaagccgatggtgaa
ggcaaactgagttggcctcaacttagagtttgtatcggcttttctggggcactcaacccc
aagttcagctgcaggagaagagccctggcaacacccagacagaagaaatccaaagggagg
acagtactttgcaagcttgtttcaaactcttcaagaaagcaccaagacattttgacctgc
cattctgaccctatgggccttctggccagattaccagagaaaattcggcttgagagaaat
gatgcaccccaaacaaagctggtgatcaacaaaggaggcggagctctggccgtaatgctc
acttgcccaccactcacctactactacgagacccggttcctaacaggccgcacacgggta
tcagtccacggccccggggttggggacccctggtgtaagagaaggaggtcagggggaggc
actgcagaaacagagggaggagacagaaaaacaaaacacctggtagacagttcacattcg
acctcagacaggagcatcctaacacctggcctgacacctcgcaagatggtgccaagacgc
aaagaaggctatggaggtcccacaggctttgaggagcacttccacacctgtagcctctcc
ttgtctgaagtcctgcagcacttactgtcaagactaattgcagaaccactaggaatgata
cccataataatcacagctgctcccctttaccacacgcttctccagccaggggctctgctt
acccaacagcccggcatcttctcagcatcctggactcaccgcatacagctcaaggttcaa
ggtttccactgtggccgtggaggccaccccacgcaggcctcaggtggtcccactgcctgc
cctgaggacccctccacaggattggtggtcaagggcctggaacactggaagtgtgggcct
gggaagcaccgtggtcacacaaagagccctaaaacagaaaatgcaatccgggttcagatt
ccttgcctgtgtcccctcggcaccctcctcagtatcctgcccccagcttccacacggtgc
atcattgcctataatcatgattgtcaagctcaaatgcacatcagcagccctcggagagtg
tacaaaattcagactgctgggaccgccctcagggtttctgatccaagaggcctgggggcg
gggcctgagactctgcattcctacctaaaggcagcggcttcctccaagttctgggtcacc
tcaccttcccattgtggcttctcagctgctttatcacctgtgtaa

>gi568815583f:66966155_67290533|GENSCAN_predicted_peptide_5|591_aa
MPLVSSSRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDEVC
VNPYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIPETPP
PGYLSEDGETSDHQMNHSMDAGSPNLSPNPMSPAHNNLGEYLLVHTTGTPSSCSPGESPV
WGGGPEDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSMTVDGFTDPSNSERFCLGL
LSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCK
IPPDLTGLQSTEDKDTDEFNIRDGCQAPSQQPRKGPPLHTISLFLEALFADFSLLWESEL
VGQPSISPCSPVSVFLAGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKG
WGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSKHTDWEVRVQQNLHTGQ
REKSMSATSLKTHLRLSFFTLKSWKDLLRPSAYAMYSVYYHINLKEIRMTLDPSSIISPK
SAVLKVGPRTEPAASVITQMLKMQILRPHARPTEAATLEWGPPGDCDIAHF

>gi568815583f:66966155_67290533|GENSCAN_predicted_CDS_5|1776_bp
atgcccttagtcagcagctccaggtccctggatggccggttgcaggtgtcccatcggaag
gggctccctcatgtcatctactgccgcctgtggcgatggccagacctgcacagccaccac
gagctacgggccatggagctgtgtgagttcgccttcaatatgaagaaggacgaggtctgc
gtgaatccctaccactaccagagagtagagacaccagttctacctcctgtgttggtgcca
cgccacacagagatcccggccgagttccccccactggacgactacagccattccatcccc
gaaaacactaacttccccgcaggcatcgagccccagagcaatattccagagaccccaccc
cctggctacctgagtgaagatggagaaaccagtgaccaccagatgaaccacagcatggac
gcaggttctccaaacctatccccgaatccgatgtccccagcacataataacttgggtgag
tatctccttgtgcacacaactggaaccccctctagctgcagccctggcgagtcgccagtg
tggggagggggccctgaagacctgcagccagttacctactgcgagccggccttctggtgc
tccatctcctactacgagctgaaccagcgcgtcggggagacattccacgcctcgcagcca
tccatgactgtggatggcttcaccgacccctccaattcggagcgcttctgcctagggctg
ctctccaatgtcaacaggaatgcagcagtggagctgacacggagacacatcggaagaggc
gtgcggctctactacatcggaggggaggtcttcgcagagtgcctcagtgacagcgctatt
tttgtccagtctcccaactgtaaccagcgctatggctggcacccggccaccgtctgcaag
atcccaccagaccttacaggcctgcagagcacagaagacaaagacacggatgagttcaat
ataagggacgggtgccaagcaccaagccagcagcccaggaaaggcccccctctccacacc
atctccctatttttggaagccctctttgcagacttctccctgctctgggagtcggagctt
gtgggccagccttccatctccccttgcagccctgtttctgtgtttttggcaggatgcaac
ctgaagatcttcaacaaccaggagttcgctgccctcctggcccagtcggtcaaccagggc
tttgaggctgtctaccagttgacccgaatgtgcaccatccgcatgagcttcgtcaaaggc
tggggagcggagtacaggagacagactgtgaccagtaccccctgctggattgagctgcac
ctgaatgggcctttgcagtggcttgacaaggtcctcacccagatgggctccccaagcatc
cgctgttccaaacatactgattgggaggtgcgtgttcagcagaacctgcacacaggacag
cgggaaaaatcgatgagcgccacctctttaaaaactcacttacgtttgtcctttttcact
ttgaaaagttggaaggatctgctgaggcccagtgcatatgcaatgtatagtgtctattat
cacattaatctcaaagagattcgaatgacgctcgacccaagcagcattatttcccctaag
tcagcggttctcaaagtgggtcccaggaccgaaccagcagcatcggttatcacacagatg
ttaaagatgcaaattctcaggccccacgccaggcctactgaagccgcaactctggagtgg
ggccctccaggtgactgtgacatagctcacttctga

>gi568815583f:66966155_67290533|GENSCAN_predicted_peptide_6|316_aa
MTDVYVCKEVQWVLGLIDFKNEAVNPRCECPEFLPSGGFVVSLTSGVKLQTFAVSVTALK
GGVSGVVCSSQWVLGLADFRNEAADPHDILGTEDLIVEVTSNDAVRFYPWTIDNKYYSAD
INLCVVPNKFLVTAEIAESVQAFVVYFDSTQKSGLDSVSSWLPLAKAWLPEVMILVCDRV
SEDGINRQKAQEWCIKHGFELVELSPEELPEEDDDFPESTGVKRIVQALNANVWSNVVMK
NGGEKQDPKRKSNMLIFTHNPICQQQIVLNPSLIIGVVHLTQQMPRLIALWVAKAFWMAI
GGDRDEIEGLSSDEEH

>gi568815583f:66966155_67290533|GENSCAN_predicted_CDS_6|951_bp
atgacagatgtttatgtctgcaaggaggtccagtgggttcttggtctcattgacttcaag
aatgaagccgtgaaccctcgttgtgagtgtccggagtttcttccttctggtgggttcgtg
gtctcgctgacttcaggagtgaagctgcagaccttcgccgtgagtgttacagctcttaaa
ggtggtgtgtccggagttgtttgttcctcccagtgggttcttggtcttgctgacttcagg
aatgaagctgcagaccctcacgatatccttggaacagaagatcttattgtggaagtgact
tccaatgatgctgtgagattttatccctggaccattgataataaatactattcagcagac
atcaatctatgtgtggtgccaaacaaatttcttgttactgcagagattgcagaatctgtc
caagcatttgtggtttactttgacagcacacaaaaatcgggccttgatagtgtctcctca
tggcttccactggcaaaagcatggttacctgaggtgatgatcttggtctgcgatagagtg
tctgaagatggtataaaccgacaaaaagctcaagaatggtgcatcaaacatggctttgaa
ttggtagaacttagtccagaggagttgcctgaggaggatgatgacttcccagaatctaca
ggagtaaagcgaattgtccaagccctgaatgccaatgtgtggtccaatgtagtgatgaag
aatggtggggaaaaacaggacccaaagaggaagagtaacatgctcatattcacacacaac
cccatttgccagcagcagatagtactgaatccctctctgatcatcggggtggtgcatcta
acacaacagatgcccaggttgatagcattgtgggtggccaaagcattctggatggcaatc
gggggagacagagatgaaattgaaggcctttcatctgatgaagagcactga

>gi568815583f:66966155_67290533|GENSCAN_predicted_peptide_7|95_aa
MRHAKRQEKKQSEETKRISEPDSAMPEILELSDQKFKVTLINRLRALMKKVDNMQDKMGN
VKDKEKILKTAREKKQIAHKGALINLANDFSMETI

>gi568815583f:66966155_67290533|GENSCAN_predicted_CDS_7|288_bp
atgaggcatgctaaaaggcaagaaaaaaaacagtctgaagagacaaagcgaatatcagaa
ccagattcagctatgccagagattttggaattatcagaccagaaatttaaagtaactctg
attaataggctaagggcactaatgaaaaaagtggacaacatgcaagacaagatgggtaat
gtcaaggacaaagagaagatcctgaaaacagcaagagagaagaagcaaatagcacataaa
ggagctctaattaatctggcaaacgacttctcaatggaaacgatataa