GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:19:55

Sequence gi568815597f:169006830_169231552 : 224723 bp : 39.76% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 PlyA -   1648   1643    6                               1.05
 1.08 Term -   3255   3124  132  0  0  102   42    71 0.694   1.01
 1.07 Intr -   4122   3918  205  2  1   25   39    94 0.391  -3.52
 1.06 Intr -   6204   5932  273  2  0   77  116   174 0.416  14.83
 1.05 Intr -   7156   7065   92  1  2   59   69    18 0.182  -5.13
 1.04 Intr -  10013   9937   77  0  2   41   81    88 0.000   1.72
 1.03 Intr -  12280  12076  205  1  1   81   48    86 0.001   1.75
 1.02 Intr -  13055  12876  180  2  0   90   28   111 0.002   4.44
 1.01 Init -  25347  25066  282  0  0   79   82   192 0.999  14.79
 1.00 Prom -  28381  28342   40                              -2.15

 2.10 PlyA -  28454  28449    6                               1.05
 2.09 Term -  35176  35123   54  1  0  124   54    19 0.092  -1.32
 2.08 Intr -  38620  38472  149  2  2  102   66    61 0.122   4.33
 2.07 Intr -  41680  41480  201  2  0   85   11    99 0.119   0.24
 2.06 Intr -  45903  45762  142  0  1   12   46   107 0.447  -2.09
 2.05 Intr -  46190  46077  114  2  0  106   46    90 0.576   6.32
 2.04 Intr -  50377  50273  105  1  0  109   76    16 0.381   1.99
 2.03 Intr -  53528  53391  138  2  0  107   10    79 0.270   1.74
 2.02 Intr -  53690  53583  108  2  0  103  109    58 0.994   8.96
 2.01 Init -  55391  55185  207  2  0   83   65    83 0.721   4.37
 2.00 Prom -  66777  66738   40                              -5.85

 3.00 Prom +  75612  75651   40                              -2.95
 3.01 Init +  81689  81849  161  1  2   22   56   128 0.577   2.34
 3.02 Intr +  82446  82498   53  0  2  111  111    14 0.798   3.63
 3.03 Intr +  84569  84850  282  0  0   34   86   173 0.937   8.17
 3.04 Intr +  93508  93625  118  2  1   71  121    52 0.951   5.40
 3.05 Term +  94177  94312  136  1  1   77   48   125 0.928   3.91
 3.06 PlyA +  95004  95009    6                              -0.45

 4.07 PlyA -  95460  95455    6                              -0.45
 4.06 Term -  98231  98034  198  2  0   23   35   154 0.481   0.02
 4.05 Intr - 100305  99733  573  0  0   81   48   304 0.027  17.71
 4.04 Intr - 101172 101021  152  1  2  104  -90   283 0.040  11.06
 4.03 Intr - 104726 104623  104  1  2   42   89    86 0.524   3.00
 4.02 Intr - 105690 105611   80  0  2    7   88    79 0.336  -2.77
 4.01 Init - 107065 106916  150  1  0   63   82    67 0.287   3.69
 4.00 Prom - 108835 108796   40                              -5.55

 5.00 Prom + 111956 111995   40                              -6.75
 5.01 Init + 112270 112314   45  0  0   91   99    18 0.018   3.93
 5.02 Intr + 118066 118210  145  0  1  -31  115   138 0.000   3.53
 5.03 Intr + 120395 120453   59  0  2   75   52   106 0.626   3.38
 5.04 Intr + 123181 123261   81  0  0   45   98    93 0.641   4.92
 5.05 Term + 124463 124726  264  1  0   56   43   386 0.740  25.42
 5.06 PlyA + 125172 125177    6                               1.05

 6.04 PlyA - 125300 125295    6                               1.05
 6.03 Term - 129470 129255  216  2  0   71   40   111 0.121   0.76
 6.02 Intr - 162725 162618  108  2  0   62   94    89 0.271   6.46
 6.01 Init - 223987 223889   99  1  0   71   95   116 0.455  10.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 101172 100982  191  1  2  104   33   249 0.935  17.63
S.002 Intr + 118055 118210  156  0  0   98  115   151 0.999  17.86
S.003 Sngl - 180321 179851  471  0  0   30   38   193 0.899   4.37


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:169006830_169231552|GENSCAN_predicted_peptide_1|481_aa
MVPLHWVIQPDLVGRKKEREREREREKEEEGEGEGEEEEERRRRRRRKKKEGRKERKRKK
ERKKKKETRKKEKRKEIMKTMESKERRLRLLGPEPIPKWCWDMQEEPKAMSRAQVLRELS
SDQRMQFRTHLGGSETPKLDCKDMESSAQRMDGVVGYRFGLLDVSQGGLCGRTPGRMIAG
NFSLPWRAQMPPCWVRTGFLGGPGSAVASKPSVWRFPAPVAGGQLAVPAWSSAGALLPLA
LGQHADFKAPSPNTVTFPVTGHQSVHVQRWRAHSSAHGRSQVPAIMSDKWLVHKQCLING
CRISLFLAELPLKVAGVSLSGINSSQNLLHLPGDNVLEKASVSCQNPTGMGRTPWKRRIP
VCVLQQETVRSQCPGEVSRQGIRCDKWVIESVSIGQQWNSCTSLLTWVSQKREPEAKGFC
TATISVVILRKKECWKKSKTTAKPGHKEHTDSGVQMCLEREDYRTNMLYKTGTNKFLSQG
F

>gi568815597f:169006830_169231552|GENSCAN_predicted_CDS_1|1446_bp
atggtgccactgcactgggtgatacagccagatcttgttggaagaaagaaagagagagag
agagagagagagagagagaaagaagaagaaggagaaggagaaggagaagaagaagaagaa
agaaggagaagaagaagaaggaagaagaaggaaggaaggaaagaaagaaaaagaaagaaa
gagagaaagaaaaagaaagaaacaagaaagaaagaaaaaagaaaagaaataatgaaaact
atggaaagcaaagaaaggaggctgcgccttcttggtccagagcccattccaaagtggtgc
tgggatatgcaggaggagccaaaggcaatgagtcgagcccaggtgctcagagagctgagt
tctgatcagagaatgcagttcagaacacacctggggggctcagagaccccgaagctagac
tgcaaggatatggagagctcagctcagaggatggatggggtggtaggttatagatttggc
cttttggatgtctcacaaggaggtctttgtggcagaacacctggaaggatgattgcaggc
aatttctccctcccctggagagcacagatgccaccctgttgggtgcggactgggttctta
ggaggcccaggaagtgctgttgcttctaaaccctctgtttggcggtttcctgcacctgtt
gcaggagggcagttggctgtccctgcatggtcgagtgctggggctttacttcctctggct
ctgggccagcatgcagacttcaaggccccatctccaaatacagtcacattcccagttact
gggcatcagagcgtccacgtacagagatggagggctcacagttcagcccatggcagatca
caggttcctgccatcatgtctgacaaatggttagtgcacaagcagtgtttgatcaatgga
tgccggatttccctgttcttggccgaattgcctttgaaagtagcaggagtcagtctctca
ggcattaatagttcccagaaccttctccatctccctggagataatgtcttggagaaggct
tctgtcagctgccagaaccccacaggaatggggaggactccatggaagagaagaattcca
gtctgtgtgcttcagcaagaaactgtaaggtcacagtgcccaggagaggtcagcagacaa
ggaatcagatgtgataagtgggttattgaatctgtgtccataggacagcagtggaattct
tgtacttctcttttaacctgggtgtcccagaaaagagaacctgaggcaaagggcttctgt
actgctactatatcagttgtcatcctgaggaaaaaagagtgttggaaaaagagtaaaacc
actgcaaaacctggccataaggagcatacagactctggtgttcagatgtgcttggagagg
gaagactatagaacaaatatgttatataagacaggaacaaataagttcctgtctcagggc
ttttga

>gi568815597f:169006830_169231552|GENSCAN_predicted_peptide_2|405_aa
MPYRVLVCSSSSDLVVVRTFTWQPRAPKASVLGNKEEAVSPFMTKPWTSATLLVNAVSSL
LTFKWVSWEPALADGEEPHYLKTTHSGDVLYVIGLPCENPWLFFQALLGKICVCGLSPEH
TLVFSGGKHSQGRKRFCNVDSVRCSSLRNLSTQPPLHPGEINSLVALHMDACDTSQGWRV
CNTESRDYSRHLNRTASQDGLFLLSYASIIGSKLVQTLGSLDTMNSESEPFILSCSRTTR
RQNSSDTELKKEGVYLAGASARLLSQELSFPIQLFGASYHVHFQFKVRLRQPLARLVPHM
IPTSQVPASRSNLWTELAKVHEITVANRGEVKARGSILGTVLGFKVGIRAGLLVKGGGQQ
AQRAQVALGKPGEGCEVPSLRQAREGHMLPIYYLHEIQFLAYTCD

>gi568815597f:169006830_169231552|GENSCAN_predicted_CDS_2|1218_bp
atgccctacagagtgcttgtatgcagctcatccagtgatcttgtggtagttagaaccttt
acatggcagcccagggctccaaaagcaagtgttctaggaaacaaagaggaagctgtaagc
ccttttatgacaaagccttggacatcagctactctgttggtgaatgcagtctcaagccta
ctcacattcaagtgggtgtcatgggagccagctcttgctgatggtgaggagcctcattat
cttaagacaacacacagtggagatgtgctttacgtaattggcctgccctgtgaaaacccc
tggctgttttttcaggctcttctagggaaaatttgcgtctgtggccttagtccagaacac
accctagtcttctctggagggaaacacagtcagggaaggaagagattttgtaatgtggac
agtgttcggtgttcatcgctgaggaatctgagtactcagcccccactgcacccaggtgaa
ataaacagccttgttgctcttcacatggatgcgtgtgacactagccagggatggagagtg
tgtaatactgagagtagggattattctaggcacctgaatagaacagccagccaggatggc
ttgttcctgctctcctatgcttctatcattggcagtaaacttgtgcaaacactgggatcc
ctggataccatgaattcagagtctgagcctttcatcttgagctgtagcaggaccacccgc
agacaaaactcctcagacaccgagttaaagaaggaaggggtttatttggccggggcatcg
gcaagactcctgtctcaagagctgagcttcccgattcaattatttggcgcttcctaccat
gtacattttcaatttaaagtgaggctacgccaacccctggcaaggcttgtgccccacatg
ataccaaccagccaagtacctgcttccagaagcaatctgtggacagagcttgcaaaggtc
catgagatcactgttgcaaaccggggagaggtcaaggcaagaggaagtatcttgggaaca
gtgctgggtttcaaagtaggcatcagggcagggctgctagttaaagggggtggtcagcag
gcccagagggcccaggttgccctggggaagcctggagaaggctgtgaagttccaagctta
aggcaggcaagggaaggccatatgctaccaatctactatcttcacgagatccagttttta
gcttacacatgtgactga

>gi568815597f:169006830_169231552|GENSCAN_predicted_peptide_3|249_aa
MSLPLESRIGGCERERENAQTQTGSRDLLHNLQSPVQNENAGHLPENLLRISKRSNNLGF
LDEDIRPTFKKPFRYEEQVPIQANSRKEGFNVGIQKSHRNPRTGLLGTEGPVRRGTEKMF
RTLAEAASGLPVFILLFFLVIEPCVLYAGTWLPVAHYSPQPALQQGRNLHQGSPGLGFPA
TCDLAGKCELCQSDSLCLESRLEARTRVPALKGHEPMRNHADEGSKYNERVGKFLTQVLK
KYEIFYSKK

>gi568815597f:169006830_169231552|GENSCAN_predicted_CDS_3|750_bp
atgtctctgcctttggaaagccggattggaggatgtgaaagggagagagaaaatgctcaa
acacagacagggagtcgggacctgctacataatttgcagagtccagtgcaaaatgaaaat
gcagggcacttgccagaaaatttattaagaatttcaaaaaggtctaacaatttaggattc
cttgatgaagacataaggcctacctttaagaaaccatttcgttacgaagaacaggttccc
attcaggctaattctagaaaagagggttttaatgtcgggatacagaaatctcacaggaat
ccaaggacagggctgcttggtacagagggccccgtgagaagaggaactgagaagatgttc
agaactctggcagaagctgctagtggtcttccagtgttcattcttcttttcttcttagta
atagaaccctgtgtgctttatgcgggcacatggctgccggttgcacactacagtccccag
cctgccttgcagcaagggaggaacctacaccaaggcagtccaggcttaggtttcccagca
acctgtgacctggctggaaaatgtgaactgtgccaatccgattccctttgcctggaatcc
agactagaagcaagaaccagagtacctgctttaaagggacatgagccaatgagaaatcat
gcagatgaaggcagcaagtataatgagagggttggaaagtttctcacacaagtactgaag
aaatacgagattttttactcgaaaaagtga

>gi568815597f:169006830_169231552|GENSCAN_predicted_peptide_4|418_aa
MRKRRDRNYQAKEQGRWRTEDFSCDSDHRTGMHFSKMSHQHSFGEVRVCQLLLNLCQGKA
EKGQVIAIPQQQLQGHSKSDTHAISEGNEAIHVDFTWRGHSVLICGLKFTDDPPKQEHQS
ASVQDSLNDCSGGASGVGGDGHDDDDDDDDVGGGGGSDAAGGPRPCAPLWGHRIPHRTAS
PGRRDPAASTTLAPATPASAVGAEPAADPAQGMRRPGKIRRGGRELRTPYLHQLPPVLPR
NSFFSEFQMNFFQLPSSLAFPRAMAMAGQQLPRSGGWVAAARALASSAPLGFSGLALCRQ
DAPLPLRLSECETRGGGAKAGAGGGGGGGGGGGGAGAEGGTAQAARLRAPHLLLACRTCA
NLNIPEIRGRSDHLSTKPQWGRLQGSVKGIREREQLIEKGSHLSFSTCNVYVGKTPAW

>gi568815597f:169006830_169231552|GENSCAN_predicted_CDS_4|1257_bp
atgaggaaaagaagagacagaaattaccaggccaaagaacaaggaagatggaggactgag
gacttttcctgtgactcagaccacaggacaggaatgcatttttccaagatgagccaccag
cattcctttggagaagtcagggtttgtcagctgttactaaacctttgccaagggaaagca
gagaagggacaagtcattgccatccctcagcagcagcttcaaggtcattcaaaaagtgac
acccatgctatctctgaaggaaatgaagctattcatgtggattttacctggcggggccac
tcggtcctgatatgtgggcttaaattcactgatgatcctcccaagcaggaacaccaatcg
gcctctgttcaggactccctgaatgactgcagtggtggtgccagtggtgttggtggtgat
ggtcatgatgatgatgatgatgatgatgatgttggaggaggagggggcagtgatgcagca
gggggaccccgaccctgcgccccactctggggacaccgcattccgcacaggactgcaagc
ccaggccggcgcgacccagcagcgtccaccaccctcgcccccgccaccccggccagcgcg
gtgggtgcggaaccggccgcggaccctgcgcaggggatgcgccgcccgggaaagatcaga
cgcggcggccgggagctgcggaccccgtacttacaccaactgccaccggtcctgcccaga
aactccttcttctctgagttccagatgaatttcttccagctgccctcctccttggctttc
ccgcgggccatggcgatggcgggtcagcagctgccgcggtccggagggtgggtggctgcg
gcgcgcgccctggcgtcctctgcgccgctcggcttctccggcctggctctctgcaggcag
gacgcgccgctgccgctgcggctctcggagtgcgagacgcgcggcggaggagccaaggca
ggagcaggaggagggggaggcggcggcggcggcggcggcggggcgggggcggagggaggg
acggcgcaggctgcgcggctccgagccccgcacctattgctcgcctgcaggacctgtgca
aacctaaacattcctgaaattcgggggagaagcgaccacctatccaccaagccccagtgg
gggaggctgcagggctctgtcaagggcatccgagagagagaacagcttattgagaaagga
agccacctctcgtttagcacctgtaatgtttatgttggaaaaaccccagcttggtag

>gi568815597f:169006830_169231552|GENSCAN_predicted_peptide_5|197_aa
MEDLPYFSRDGDQRQIPQIQKTEISFRPNDPKSYEAYVLNIVRFLEKYKDSAQRDDMIFE
DCGDVPSEPKERGDFNHERGERKPPKNESLETYPVMKYNPNVLPVQCTGKRDEDKDKVGN
VEYFGLGNSPGFPLQYYPYYGKLLQPKYLQPLLAVQFTNLTMDTEIRIECKAYGENIGYS
EKDRFQGRFDVKIEVKS

>gi568815597f:169006830_169231552|GENSCAN_predicted_CDS_5|594_bp
atggaggatcttccttatttctcaagagatggggaccaaaggcagattcctcagatccag
aagactgaaatttcctttcgtcctaatgatcccaagagctatgaggcatatgtactgaac
atagttaggttcctggaaaagtacaaagattcagcccagagggatgacatgatttttgaa
gattgtggcgatgtgcccagtgaaccgaaagaacgaggagactttaatcatgaacgagga
gagcgaaagcctcccaagaatgagtccttggagacttacccagtgatgaagtataaccca
aatgtccttcccgttcagtgcactggcaagcgagatgaagataaggataaagttggaaat
gtggagtattttggactgggcaactcccctggttttcctctgcagtattatccgtactat
ggcaaactcctgcagcccaaatacctgcagcccctgctggccgtacagttcaccaatctt
accatggacactgaaattcgcatagagtgtaaggcgtacggtgagaacattgggtacagt
gagaaagaccgttttcagggacgttttgatgtaaaaattgaagttaagagctga

>gi568815597f:169006830_169231552|GENSCAN_predicted_peptide_6|140_aa
MVTEMYSGPCVAMEIQQNNATKTFREFCGPADPEIARHLRPGTLRAIFGKTKIQNAVHCT
DLPEDGLLERLQSRLIRTSPRPNLYLLVISEPLLLIKRKGSYVLFLQDCSILLEALQKTD
QVMTISGTGCARYMWLAVLN

>gi568815597f:169006830_169231552|GENSCAN_predicted_CDS_6|423_bp
atggtgacagaaatgtattctggcccttgtgtagcaatggagattcaacagaataatgct
acaaagacatttcgagaattttgtggacctgctgatcctgaaattgcccggcatttacgc
cctggaactctcagagcaatctttggtaaaactaagatccagaatgctgttcactgtact
gatctgccagaggatggcctattagagaggctccaaagcagactcatcagaacctcccca
aggcctaatctttacctgctggttatttcagaacccctgctccttatcaaaaggaaagga
tcctatgtcctattcctgcaggattgttccatactccttgaagcactccaaaagacagac
caagtaatgactatatcgggcactggctgtgcccgatatatgtggctggctgttttaaat
taa