GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:15:46

Sequence gi568815597f:28583613_28814770 : 231158 bp : 46.66% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   2128   2167   40                              -0.36
 1.01 Init +   8900   9132  233  1  2  111   80   400 0.985  39.23
 1.02 Term +  10082  10505  424  2  1  134   41   508 0.954  45.47
 1.03 PlyA +  11812  11817    6                               1.05

 2.07 PlyA -  12555  12550    6                               1.05
 2.06 Term -  19962  19927   36  0  0  120   41    39 0.652  -0.26
 2.05 Intr -  21848  21760   89  0  2  104   94    71 0.909   8.99
 2.04 Intr -  29749  29635  115  1  1  111   77   163 0.994  17.52
 2.03 Intr -  34418  34341   78  2  0   48   94   123 0.994   8.65
 2.02 Intr -  38553  38359  195  0  0   82   48   183 0.663  13.31
 2.01 Init -  40405  40334   72  1  0   66   87    42 0.683   2.97
 2.00 Prom -  41605  41566   40                              -2.56

 3.05 PlyA -  45165  45160    6                               1.05
 3.04 Term -  59358  59141  218  1  2   43   55   157 0.195   5.21
 3.03 Intr -  70999  70390  610  1  1   97   55   130 0.002   2.59
 3.02 Intr -  72602  72427  176  0  2    4   55   115 0.235  -0.54
 3.01 Init -  73257  73008  250  0  1   45   36   143 0.833   2.43
 3.00 Prom -  73710  73671   40                              -6.66

 4.00 Prom +  80945  80984   40                              -5.46
 4.01 Init +  85172  85227   56  1  2   30   89   151 0.652   8.16
 4.02 Intr + 106462 106574  113  1  2   31   87   124 0.952   6.62
 4.03 Intr + 107973 108097  125  1  2  124   86    68 0.970  10.50
 4.04 Intr + 109330 109433  104  0  2   83  115   100 0.998  11.17
 4.05 Intr + 113315 113472  158  2  2   72   54   114 0.958   6.05
 4.06 Intr + 118826 118957  132  0  0  102   66   133 0.987  13.12
 4.07 Intr + 120580 120717  138  2  0   81  111    52 0.976   7.24
 4.08 Intr + 126908 127030  123  0  0   61   91    69 0.927   5.06
 4.09 Term + 130461 131161  701  1  2   97   36   637 0.884  53.10
 4.10 PlyA + 134576 134581    6                               1.05

 5.00 Prom + 138536 138575   40                              -6.46
 5.01 Init + 153509 153535   27  1  0   79   92    28 0.670   2.06
 5.02 Intr + 154046 154070   25  1  1  105  115    16 0.785   3.60
 5.03 Intr + 154647 154726   80  1  2   80   86    23 0.784   0.57
 5.04 Intr + 158791 160374 1584  0  0  130   86   830 0.743  76.04
 5.05 Term + 165995 166012   18  1  0   96   42    26 0.302  -2.88
 5.06 PlyA + 167322 167327    6                               1.05

 6.00 Prom + 175253 175292   40                              -5.06
 6.01 Init + 191875 191932   58  0  1   83   99    74 0.646   8.05
 6.02 Term + 205298 205383   86  0  2   75   53    56 0.118  -1.38
 6.03 PlyA + 205562 205567    6                               1.05

 7.00 Prom + 220353 220392   40                              -6.26
 7.01 Init + 228772 228998  227  0  2   97  117   411 0.995  42.84
 7.02 Intr + 229115 229185   71  2  2  101   22    88 0.438   2.33

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  71244  71083  162  0  0   72   52   146 0.911   7.34


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:28583613_28814770|GENSCAN_predicted_peptide_1|218_aa
MEAEGCRYQFRVALLGDAAVGKTSLLRSYVAGAPGAPEPEPEPEPTVGAECYRRALQLRA
GPRVKLQLWDTAGHERFRCITRSFYRNVVGVLLVFDVTNRKSFEHIQDWHQEVMATQGPD
KVIFLLVGHKSDLQSTRCVSAQEAEELAASLGMAFVETSVKNNCNVDLAFDTLADAIQQA
LQQGDIKLEEGWGGVRLIHKTQIPRSPSRKQHSGPCQC

>gi568815597f:28583613_28814770|GENSCAN_predicted_CDS_1|657_bp
atggaggccgagggctgccgctaccaatttcgggtcgcgctgctgggggacgcggcggtg
ggcaagacgtcgctgctgcggagctacgtggcaggcgcgcctggcgccccggagccggag
cccgagcccgagcccacggtgggcgccgagtgctaccgccgcgcgctgcagctgcgggcc
gggccgcgggtcaagctgcaactctgggacaccgcgggccacgagcgcttcaggtgcatc
accaggtccttttaccggaatgtggtgggtgtcctgctggtctttgatgtgacaaacagg
aagtcctttgaacacatccaagactggcaccaggaggtcatggccactcagggcccggac
aaggtcatcttcctgctggttggccacaagagtgacctgcagagcacccgctgtgtctca
gcccaggaggccgaggagctagctgcctccctgggcatggccttcgtggagacctcggtt
aaaaacaactgcaatgtggacctggcctttgacaccctcgctgatgctatccagcaggcc
ctgcagcagggggacatcaagctagaagagggctgggggggtgtccggctcatccacaag
acccaaatccccaggtcccccagcaggaagcagcactcaggcccatgccagtgttga

>gi568815597f:28583613_28814770|GENSCAN_predicted_peptide_2|194_aa
MAASHFTGLTAVADVIKDLDTQIALIGLGPHSSKKKQDLDKLYELKSKARQIMNQFGPSA
LINLSNFSSIKPEPASTPPQGSMANSTAVVLTKKKLQDLVREVDPNEQLDEDVEEMLLQI
ADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEA
HKQRMALIRKTTKK

>gi568815597f:28583613_28814770|GENSCAN_predicted_CDS_2|585_bp
atggctgcctctcatttcaccgggctcacagctgttgctgatgtaattaaagatctagac
actcagatagctttaattggccttggtcctcacagctccaaaaagaaacaggatctcgat
aagctctatgagctgaagtccaaagctcggcagattatgaaccagtttggcccctcagcc
ctaatcaacctctccaatttctcatccataaaaccggaaccagccagcacccctccacaa
ggctccatggccaatagtactgcagtggtattgaccaagaagaaattacaggacttagta
agagaagtggatcctaatgagcagttggatgaagatgtggaggagatgctgctgcagatt
gctgatgattttatcgagagtgtggtgacagcagcctgtcagcttgcgcggcatcgcaag
tctagcaccctggaggtgaaagatgtccagctgcatttagagcgccagtggaacatgtgg
atcccaggatttggctctgaagaaatccgaccctacaaaaaagcttgcaccacagaagct
cacaaacagagaatggcattgatccggaaaacaaccaagaaataa

>gi568815597f:28583613_28814770|GENSCAN_predicted_peptide_3|417_aa
MTVDYCKLNQVVTPVAAAEPDVALLLEQINTSPGTCYAATDLANAFFSIPVHKAHERQFA
FSLQGRQYTFTILPQGYINSHKAVTRKTASFEWSPKQDKALQQVQAVVQAALPFGPYDPA
DPMVLEVSVADRVAVWCLWQAPKGQRFILAGIDTYSKYGFAYLACNASAKTIIRGLTECL
IHHHGIPHSTASDHGTDFTAKQVQQWALAHGIHLSYHVPHYPEAAGLIEQRNGLLKSQLQ
RQLGDNSLQGWGKVLQKAVYALNQHPIYGTVSPITRIQGSRNQEVEMEVAPLTITLSDPL
ANFLLPVPMALCSADLEVLVLEGGMLPPGGTRIPLNWKLRLPPRPVEEQEREEGVRTQTY
SGSVFEGPGCGRDGAVRIQALGKGLTERIRLGEDAAVGTRALRRDLGNGDGCEFSGI

>gi568815597f:28583613_28814770|GENSCAN_predicted_CDS_3|1254_bp
atgacagtggattattgtaagcttaaccaagtggtgactccagttgcagctgctgaacca
gatgtggctttattgcttgagcaaattaacacatctcctggtacctgttatgcagctact
gatttggcaaatgcctttttctccattcctgtccacaaggcccacgagaggcaattcgcc
ttcagcttgcaaggccggcaatatactttcactatcttacctcaggggtatatcaactct
cacaaagctgtgacccgaaagactgccagttttgagtggagtccaaaacaggacaaggct
ctgcaacaggtccaggctgttgtgcaagctgctctgccatttggaccatatgacccagca
gatccaatggtgcttgaggtgtcagtggcagatagggttgctgtttggtgcctttggcag
gcccccaaagggcagaggtttatcctcgctggaatagacacttactctaaatatgggttt
gcctatcttgcatgcaatgcttctgccaagactatcatccgtggacttacagaatgcctt
atccaccatcacggtattccacacagcactgcctctgaccacggcactgactttacagct
aaacaagtgcaacagtgggctcttgctcatggaattcacttgtcttaccatgttccccat
tatcctgaagcagctggattgatagaacagcggaatggccttttgaagtcacaattacaa
cgccaactaggtgacaattctttgcagggctggggaaaagttctccagaaggctgtgtat
gctctgaatcagcatccaatatatggtactgtttctcccataaccaggattcaagggtcc
aggaatcaagaggtggaaatggaagtggctccactcaccatcacccttagtgatccactg
gcaaacttcttgcttcctgttcccatggcattatgttctgctgacctagaggtcttagtt
ctagagggaggaatgctgccaccaggaggcacaaggattccattaaactggaagttaaga
ttgcctcctaggccagttgaggaacaagagcgggaggagggagtcaggacccagacctac
agtgggtcagtgttcgaaggaccaggttgtggacgagacggggctgtgaggattcaggct
cttgggaagggactgactgagaggatcaggctcggagaagacgcggctgtggggacccgg
gctctaagacgggacttagggaacggggacggatgcgagttctccggcatctga

>gi568815597f:28583613_28814770|GENSCAN_predicted_peptide_4|549_aa
MLRRLPALAARRPPARRRRLFIDGHFYNRIYEAGSENNTAVVAVETHTIHKIEEGIDTGT
IEANEDMEIAYPITCGESKAILLWKKFVCPGINVKCVKFNDQLISPKHFVHLAGKSTLKD
WKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRSTKFDLLISSARAPVPGQQTSVVQT
PTSADGSITQIAISEESMEEAGLEWNSALTAAVTMATEEGVKKDSEEISEDTLMFWKGIA
DVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTDAAVLNNVAHTFGLMDTVKKVLDNR
RNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKSQTVQNVVLMPVSTPKPPKRPRLQR
PASTTVLSPSPPVQQPQFTVISPITITPVGQSFSMGNIPVATLSQGSSPVTVHTLPSGPQ
LFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAMQDGSTLGNMTTMVSPVELVAMESGL
TSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKAVILETELRTEEKVVAEMEEHQHQVH
NVEIVVLED

>gi568815597f:28583613_28814770|GENSCAN_predicted_CDS_4|1650_bp
atgctccgtcgcctgcccgccctggccgctcgccgcccgcccgcccgacggagacgtttg
tttatcgatggacacttttacaacaggatttatgaagctgggtcggagaacaacacggca
gttgtagcagtagaaactcacacgatacacaaaattgaagaagggattgatacaggcact
atagaagcaaatgaggatatggaaattgcttaccccataacttgtggggagagcaaagcc
atcctcctctggaagaagtttgtatgtccaggaataaacgtgaagtgtgtcaagttcaat
gatcagttgatcagccccaagcactttgttcatctggctggcaagtccactctgaaggac
tggaagagagctattcgtctgggtgggatcatgctcaggaaaatgatggactccggacag
attgatttttaccaacatgacaaagtttgctccaatacctgcagaagcaccaaatttgat
cttctgatcagcagtgcaagagctccagtgccaggacagcagacaagtgtggtgcagaca
cccacttcggctgatggtagcatcacgcagattgccatctcagaagagagcatggaagag
gcagggctggaatggaactcagctctcaccgctgctgtcaccatggccacggaggagggt
gtaaagaaagactcagaggaaatttcagaggacactttgatgttctggaaaggaatagct
gatgtagggctgatggaagaggttgtctgcaatatacagaaggaaatagaggagctactc
aggggagttcagcagcggctcatccaggctcccttccaagtcacagatgctgctgttctc
aacaatgtagcacacacatttggcctaatggacacagtcaagaaggttttagacaacaga
aggaaccaagtagagcagggagaagaacagtttctctatactctgacagacttggaacgc
cagttggaggagcagaagaagcaaggccaggatcacaggctgaaatctcagacagttcaa
aatgtggtactgatgcctgtgagcactcctaagcctccaaaaaggccccggctccagcgg
ccagcctccaccactgtcttgagcccttctcctcctgtccagcagcctcagttcacagtc
atctcacccatcaccatcaccccagtgggtcagtcattttccatgggcaatattccagtg
gccaccctcagccagggctccagtcctgtgactgtccacacactgccttctggccctcag
ctcttccgctatgccacagtggtctcctctgccaagagcagctcaccagacacagtgacc
atccacccttcatctagcttggcgctgctgagctctactgccatgcaggatgggagtaca
ctgggcaacatgaccaccatggttagccctgtggaattggtggccatggagtccggccta
acctcggcaattcaggctgttgaaagcacctcagaggatgggcagaccatcattgagatt
gatccagccccggacccagaagctgaagatactgagggcaaagcagtcatcttggagaca
gagctgaggactgaggagaaagttgtggctgagatggaagaacaccagcatcaagttcac
aatgtggagattgtggtcttagaggattaa

>gi568815597f:28583613_28814770|GENSCAN_predicted_peptide_5|577_aa
MSASSLLEQRPKGQGNKVQNGSVHQKDGLNDDDFEPYLSPQARPNNAYTAMSDSYLPSYY
SPSIGFSYSLGEAAWSTGGDTAMPYLTSYGQLSNGEPHFLPDAMFGQPGALGSTPFLGQH
GFNFFPSGIDFSAWGNNSSQGQSTQSSGYSSNYAYAPSSLGGAMIDGQSAFANETLNKAP
GMNTIDQGMAALKLGSTEVASNVPKVVGSAVGSGSITSNIVASNSLPPATIAPPKPASWA
DIASKPAKQQPKLKTKNGIAGSSLPPPPIKHNMDIGTWDNKGPVAKAPSQALVQNIGQPT
QGSPQPVGQQANNSPPVAQASVGQQTQPLPPPPPQPAQLSVQQQAAQPTRWVAPRNRGSG
FGHNGVDGNGVGQSQAGSGSTPSEPHPVLEKLRSINNYNPKDFDWNLKHGRVFIIKSYSE
DDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGVAEMKSAVDYN
TCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQV
LKIIASYKHTTSIFDDFSHYEKRQEEEESVKKPFNYK

>gi568815597f:28583613_28814770|GENSCAN_predicted_CDS_5|1734_bp
atgtcggccagcagcctcttggagcagagaccaaaaggtcaaggaaacaaagtacaaaat
ggatctgtacatcaaaaggatggattaaacgatgatgattttgaaccttacttgagtcca
caggcaaggcccaataatgcatatactgccatgtcagattcctacttacccagttactac
agtccctccattggcttctcctattctttgggtgaagctgcttggtctacggggggtgac
acagccatgccctacttaacttcttatggacagctgagcaacggagagccccacttccta
ccagatgcaatgtttgggcaaccaggagccctaggtagcactccatttcttggtcagcat
ggttttaatttctttcccagtgggattgacttctcagcatggggaaataacagttctcag
ggacagtctactcagagctctggatatagtagcaattatgcttatgcacctagctcctta
ggtggagccatgattgatggacagtcagcttttgccaatgagaccctcaataaggctcct
ggcatgaatactatagaccaagggatggcagcactgaagttgggtagcacagaagttgca
agcaatgttccaaaagttgtaggttctgctgttggtagcgggtccattactagtaacatc
gtggcttccaatagtttgcctccagccaccattgctcctccaaaaccagcatcttgggct
gatattgctagcaagcctgcaaaacagcaacctaaactgaagaccaagaatggcattgca
gggtcaagtcttccgccacccccgataaagcataacatggatattggaacttgggataac
aagggtcccgttgcaaaagccccctcacaggctttggttcagaatataggtcagccaacc
caggggtctcctcagcctgtaggtcagcaggctaacaatagcccaccagtggctcaggca
tcagtagggcaacagacacagccattgcctccacctccaccacagcctgcccagctttca
gtccagcaacaggcagctcagccaacccgctgggtagcacctcggaaccgtggcagtggg
ttcggtcataatggggtggatggtaatggagtaggacagtctcaggctggttctggatct
actccttcagaaccccacccagtgttggagaagcttcggtccattaataactataacccc
aaagattttgactggaatctgaaacatggccgggttttcatcattaagagctactctgag
gacgatattcaccgttccattaagtataatatttggtgcagcacagagcatggtaacaag
agactggatgctgcttatcgttccatgaacgggaaaggccccgtttacttacttttcagt
gtcaacggcagtggacacttctgtggcgtggcagaaatgaaatctgctgtggactacaac
acatgtgcaggtgtgtggtcccaggacaaatggaagggtcgttttgatgtcaggtggatt
tttgtgaaggacgttcccaatagccaactgcgacacattcgcctagagaacaacgagaat
aaaccagtgaccaactctagggacactcaggaagtgcctctggaaaaggctaagcaggtg
ttgaaaattatagccagctacaagcacaccacttccatttttgatgacttctcacactat
gagaaacgccaagaggaagaagaaagtgttaaaaagccctttaactacaagtaa

>gi568815597f:28583613_28814770|GENSCAN_predicted_peptide_6|47_aa
MVSALASAPVRKRPALTCAGSLSWWMSASSNSLLKPEACASHSRLES

>gi568815597f:28583613_28814770|GENSCAN_predicted_CDS_6|144_bp
atggtgtccgcccttgcttctgcgcctgtgcggaagcgcccggccctcacctgcgcaggg
tccctgtcatggtggatgtctgcatcatccaactcgttgcttaagccagaggcctgtgcg
agtcactctcgactcgagtcctga

>gi568815597f:28583613_28814770|GENSCAN_predicted_peptide_7|100_aa
MEPAPSAGAELQPPLFANASDAYPSACPSAGANASGPPGARSASSLALAIAITALYSAVC
AVGLLGNVLVMFGIVRGTWGPARGEATYIEGNTGMCVIVX

>gi568815597f:28583613_28814770|GENSCAN_predicted_CDS_7|300_bp
atggaaccggccccctccgccggcgccgagctgcagcccccgctcttcgccaacgcctcg
gacgcctaccctagcgcctgccccagcgctggcgccaatgcgtcggggccgccaggcgcg
cggagcgcctcgtccctcgccctggcaatcgccatcaccgcgctctactcggccgtgtgc
gccgtggggctgctgggcaacgtgcttgtcatgttcggcatcgtccggggcacctggggc
ccagcgagaggcgaggccacttacatcgaggggaacacaggaatgtgtgtcatcgtgtnn