Result of FASTA (omim) for pF1KB8169
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8169, 332 aa
  1>>>pF1KB8169 332 - 332 aa - 332 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.4535+/-0.000272; mu= 12.6115+/- 0.017
 mean_var=112.5560+/-22.770, 0's: 0 Z-trim(121.7): 26  B-trim: 2196 in 1/55
 Lambda= 0.120890
 statistics sampled from 38659 (38686) to 38659 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.79), E-opt: 0.2 (0.454), width:  16
 Scan time:  7.230

The best scores are:                                      opt bits E(85289)
NP_659480 (OMIM: 608933) endonuclease 8-like 2 iso ( 332) 2329 416.2 4.9e-116
NP_001129218 (OMIM: 608933) endonuclease 8-like 2  ( 332) 2329 416.2 4.9e-116
XP_016868790 (OMIM: 608933) PREDICTED: endonucleas ( 271) 1916 344.1   2e-94
XP_005272440 (OMIM: 608933) PREDICTED: endonucleas ( 271) 1916 344.1   2e-94
XP_005272439 (OMIM: 608933) PREDICTED: endonucleas ( 271) 1916 344.1   2e-94
NP_001129219 (OMIM: 608933) endonuclease 8-like 2  ( 271) 1916 344.1   2e-94
NP_001129220 (OMIM: 608933) endonuclease 8-like 2  ( 216) 1206 220.2 3.2e-57
XP_016863849 (OMIM: 608934) PREDICTED: endonucleas ( 503)  217 48.0 5.2e-05
NP_060718 (OMIM: 608934) endonuclease 8-like 3 [Ho ( 605)  217 48.0   6e-05
XP_006720742 (OMIM: 608844) PREDICTED: endonucleas ( 433)  174 40.4  0.0083


>>NP_659480 (OMIM: 608933) endonuclease 8-like 2 isoform  (332 aa)
 initn: 2329 init1: 2329 opt: 2329  Z-score: 2204.2  bits: 416.2 E(85289): 4.9e-116
Smith-Waterman score: 2329; 100.0% identity (100.0% similar) in 332 aa overlap (1-332:1-332)

               10        20        30        40        50        60
pF1KB8 MPEGPLVRKFHHLVSPFVGQQVVKTGGSSKKLQPASLQSLWLQDTQVHGKKLFLRFDLDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_659 MPEGPLVRKFHHLVSPFVGQQVVKTGGSSKKLQPASLQSLWLQDTQVHGKKLFLRFDLDE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 EMGPPGSSPTPEPPQKEVQKEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_659 EMGPPGSSPTPEPPQKEVQKEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLER
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 DAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHFGGGGFLAFYNC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_659 DAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHFGGGGFLAFYNC
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 QLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_659 QLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 AGIHPLSLGSVLSASRREVLVDHVVEFSTAWLQGKFQGRPQHTQVYQKEQCPAGHQVMKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_659 AGIHPLSLGSVLSASRREVLVDHVVEFSTAWLQGKFQGRPQHTQVYQKEQCPAGHQVMKE
              250       260       270       280       290       300

              310       320       330  
pF1KB8 AFGPEDGLQRLTWWCPQCQPQLSEEPEQCQFS
       ::::::::::::::::::::::::::::::::
NP_659 AFGPEDGLQRLTWWCPQCQPQLSEEPEQCQFS
              310       320       330  

>>NP_001129218 (OMIM: 608933) endonuclease 8-like 2 isof  (332 aa)
 initn: 2329 init1: 2329 opt: 2329  Z-score: 2204.2  bits: 416.2 E(85289): 4.9e-116
Smith-Waterman score: 2329; 100.0% identity (100.0% similar) in 332 aa overlap (1-332:1-332)

               10        20        30        40        50        60
pF1KB8 MPEGPLVRKFHHLVSPFVGQQVVKTGGSSKKLQPASLQSLWLQDTQVHGKKLFLRFDLDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPEGPLVRKFHHLVSPFVGQQVVKTGGSSKKLQPASLQSLWLQDTQVHGKKLFLRFDLDE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 EMGPPGSSPTPEPPQKEVQKEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EMGPPGSSPTPEPPQKEVQKEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLER
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 DAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHFGGGGFLAFYNC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHFGGGGFLAFYNC
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 QLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 AGIHPLSLGSVLSASRREVLVDHVVEFSTAWLQGKFQGRPQHTQVYQKEQCPAGHQVMKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGIHPLSLGSVLSASRREVLVDHVVEFSTAWLQGKFQGRPQHTQVYQKEQCPAGHQVMKE
              250       260       270       280       290       300

              310       320       330  
pF1KB8 AFGPEDGLQRLTWWCPQCQPQLSEEPEQCQFS
       ::::::::::::::::::::::::::::::::
NP_001 AFGPEDGLQRLTWWCPQCQPQLSEEPEQCQFS
              310       320       330  

>>XP_016868790 (OMIM: 608933) PREDICTED: endonuclease 8-  (271 aa)
 initn: 1916 init1: 1916 opt: 1916  Z-score: 1816.2  bits: 344.1 E(85289): 2e-94
Smith-Waterman score: 1916; 100.0% identity (100.0% similar) in 271 aa overlap (62-332:1-271)

              40        50        60        70        80        90 
pF1KB8 LQPASLQSLWLQDTQVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQKEGAADPKQVGE
                                     ::::::::::::::::::::::::::::::
XP_016                               MGPPGSSPTPEPPQKEVQKEGAADPKQVGE
                                             10        20        30

             100       110       120       130       140       150 
pF1KB8 PSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKK
               40        50        60        70        80        90

             160       170       180       190       200       210 
pF1KB8 ANKRGDWRDPSPRLVLHFGGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ANKRGDWRDPSPRLVLHFGGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALG
              100       110       120       130       140       150

             220       230       240       250       260       270 
pF1KB8 QAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREVLVDHVVEFSTAW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREVLVDHVVEFSTAW
              160       170       180       190       200       210

             280       290       300       310       320       330 
pF1KB8 LQGKFQGRPQHTQVYQKEQCPAGHQVMKEAFGPEDGLQRLTWWCPQCQPQLSEEPEQCQF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQGKFQGRPQHTQVYQKEQCPAGHQVMKEAFGPEDGLQRLTWWCPQCQPQLSEEPEQCQF
              220       230       240       250       260       270

        
pF1KB8 S
       :
XP_016 S
        

>>XP_005272440 (OMIM: 608933) PREDICTED: endonuclease 8-  (271 aa)
 initn: 1916 init1: 1916 opt: 1916  Z-score: 1816.2  bits: 344.1 E(85289): 2e-94
Smith-Waterman score: 1916; 100.0% identity (100.0% similar) in 271 aa overlap (62-332:1-271)

              40        50        60        70        80        90 
pF1KB8 LQPASLQSLWLQDTQVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQKEGAADPKQVGE
                                     ::::::::::::::::::::::::::::::
XP_005                               MGPPGSSPTPEPPQKEVQKEGAADPKQVGE
                                             10        20        30

             100       110       120       130       140       150 
pF1KB8 PSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKK
               40        50        60        70        80        90

             160       170       180       190       200       210 
pF1KB8 ANKRGDWRDPSPRLVLHFGGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ANKRGDWRDPSPRLVLHFGGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALG
              100       110       120       130       140       150

             220       230       240       250       260       270 
pF1KB8 QAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREVLVDHVVEFSTAW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREVLVDHVVEFSTAW
              160       170       180       190       200       210

             280       290       300       310       320       330 
pF1KB8 LQGKFQGRPQHTQVYQKEQCPAGHQVMKEAFGPEDGLQRLTWWCPQCQPQLSEEPEQCQF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LQGKFQGRPQHTQVYQKEQCPAGHQVMKEAFGPEDGLQRLTWWCPQCQPQLSEEPEQCQF
              220       230       240       250       260       270

        
pF1KB8 S
       :
XP_005 S
        

>>XP_005272439 (OMIM: 608933) PREDICTED: endonuclease 8-  (271 aa)
 initn: 1916 init1: 1916 opt: 1916  Z-score: 1816.2  bits: 344.1 E(85289): 2e-94
Smith-Waterman score: 1916; 100.0% identity (100.0% similar) in 271 aa overlap (62-332:1-271)

              40        50        60        70        80        90 
pF1KB8 LQPASLQSLWLQDTQVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQKEGAADPKQVGE
                                     ::::::::::::::::::::::::::::::
XP_005                               MGPPGSSPTPEPPQKEVQKEGAADPKQVGE
                                             10        20        30

             100       110       120       130       140       150 
pF1KB8 PSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKK
               40        50        60        70        80        90

             160       170       180       190       200       210 
pF1KB8 ANKRGDWRDPSPRLVLHFGGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ANKRGDWRDPSPRLVLHFGGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALG
              100       110       120       130       140       150

             220       230       240       250       260       270 
pF1KB8 QAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREVLVDHVVEFSTAW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREVLVDHVVEFSTAW
              160       170       180       190       200       210

             280       290       300       310       320       330 
pF1KB8 LQGKFQGRPQHTQVYQKEQCPAGHQVMKEAFGPEDGLQRLTWWCPQCQPQLSEEPEQCQF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LQGKFQGRPQHTQVYQKEQCPAGHQVMKEAFGPEDGLQRLTWWCPQCQPQLSEEPEQCQF
              220       230       240       250       260       270

        
pF1KB8 S
       :
XP_005 S
        

>>NP_001129219 (OMIM: 608933) endonuclease 8-like 2 isof  (271 aa)
 initn: 1916 init1: 1916 opt: 1916  Z-score: 1816.2  bits: 344.1 E(85289): 2e-94
Smith-Waterman score: 1916; 100.0% identity (100.0% similar) in 271 aa overlap (62-332:1-271)

              40        50        60        70        80        90 
pF1KB8 LQPASLQSLWLQDTQVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQKEGAADPKQVGE
                                     ::::::::::::::::::::::::::::::
NP_001                               MGPPGSSPTPEPPQKEVQKEGAADPKQVGE
                                             10        20        30

             100       110       120       130       140       150 
pF1KB8 PSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKK
               40        50        60        70        80        90

             160       170       180       190       200       210 
pF1KB8 ANKRGDWRDPSPRLVLHFGGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANKRGDWRDPSPRLVLHFGGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALG
              100       110       120       130       140       150

             220       230       240       250       260       270 
pF1KB8 QAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREVLVDHVVEFSTAW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREVLVDHVVEFSTAW
              160       170       180       190       200       210

             280       290       300       310       320       330 
pF1KB8 LQGKFQGRPQHTQVYQKEQCPAGHQVMKEAFGPEDGLQRLTWWCPQCQPQLSEEPEQCQF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQGKFQGRPQHTQVYQKEQCPAGHQVMKEAFGPEDGLQRLTWWCPQCQPQLSEEPEQCQF
              220       230       240       250       260       270

        
pF1KB8 S
       :
NP_001 S
        

>>NP_001129220 (OMIM: 608933) endonuclease 8-like 2 isof  (216 aa)
 initn: 1201 init1: 1201 opt: 1206  Z-score: 1148.3  bits: 220.2 E(85289): 3.2e-57
Smith-Waterman score: 1271; 65.1% identity (65.1% similar) in 332 aa overlap (1-332:1-216)

               10        20        30        40        50        60
pF1KB8 MPEGPLVRKFHHLVSPFVGQQVVKTGGSSKKLQPASLQSLWLQDTQVHGKKLFLRFDLDE
       :::::::::::::::::::::::::::::::::::::::::::::::             
NP_001 MPEGPLVRKFHHLVSPFVGQQVVKTGGSSKKLQPASLQSLWLQDTQV-------------
               10        20        30        40                    

               70        80        90       100       110       120
pF1KB8 EMGPPGSSPTPEPPQKEVQKEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLER
                                                                   
NP_001 ------------------------------------------------------------
                                                                   

              130       140       150       160       170       180
pF1KB8 DAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHFGGGGFLAFYNC
                                                  :::::::::::::::::
NP_001 -------------------------------------------RLVLHFGGGGFLAFYNC
                                                   50        60    

              190       200       210       220       230       240
pF1KB8 QLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYR
           70        80        90       100       110       120    

              250       260       270       280       290       300
pF1KB8 AGIHPLSLGSVLSASRREVLVDHVVEFSTAWLQGKFQGRPQHTQVYQKEQCPAGHQVMKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGIHPLSLGSVLSASRREVLVDHVVEFSTAWLQGKFQGRPQHTQVYQKEQCPAGHQVMKE
          130       140       150       160       170       180    

              310       320       330  
pF1KB8 AFGPEDGLQRLTWWCPQCQPQLSEEPEQCQFS
       ::::::::::::::::::::::::::::::::
NP_001 AFGPEDGLQRLTWWCPQCQPQLSEEPEQCQFS
          190       200       210      

>>XP_016863849 (OMIM: 608934) PREDICTED: endonuclease 8-  (503 aa)
 initn: 197 init1: 138 opt: 217  Z-score: 211.0  bits: 48.0 E(85289): 5.2e-05
Smith-Waterman score: 217; 24.5% identity (53.3% similar) in 212 aa overlap (131-331:92-292)

              110       120       130       140       150       160
pF1KB8 SSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRD
                                     ::. ::. : . .: .    : .       
XP_016 QNVLSLFNGYVYSGVETLGKELFMYFGPKALRIHFGMKGFIMINPLEYKYKNGA------
              70        80        90       100       110           

              170       180           190         200         210  
pF1KB8 PSPRLVLHFGGGGFLAFYNCQL----SWSSSPVVT--PTCDILSEKFH--RGQALEALGQ
        :: : ...    .. :.. ..    :  :.  .      :. : .:   :...     .
XP_016 -SPVLEVQLTKD-LICFFDSSVELRNSMESQQRIRMMKELDVCSPEFSFLRAESEVKKQK
          120        130       140       150       160       170   

            220       230       240       250       260       270  
pF1KB8 AQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREVLVDHVVEFSTAWL
       .. .  .:.::  . :.:::::::::. .:.::      :.  . . :.  . .::  . 
XP_016 GRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQIHHLMKMIRDFSILFY
           180       190       200       210       220       230   

            280         290        300       310       320         
pF1KB8 QGKFQGRP--QHTQVYQKEQCPAGH-QVMKEAFGPEDGLQRLTWWCPQCQPQLSEEPEQC
       . .  :    .: .::.. .:   : ..    :: ..   :.:..::.:: .  .. . :
XP_016 RCRKAGLALSKHYKVYKRPNCGQCHCRITVCRFGDNN---RMTYFCPHCQKENPQHVDIC
           240       250       260       270          280       290

     330                                                           
pF1KB8 QFS                                                         
       ..                                                          
XP_016 KLPTRNTIISWTSSRVDHVMDSVARKSEEHWTCVVCTLINKPSSKACDACLTSRPIDSVL
              300       310       320       330       340       350

>>NP_060718 (OMIM: 608934) endonuclease 8-like 3 [Homo s  (605 aa)
 initn: 173 init1: 138 opt: 217  Z-score: 209.9  bits: 48.0 E(85289): 6e-05
Smith-Waterman score: 217; 24.5% identity (53.3% similar) in 212 aa overlap (131-331:92-292)

              110       120       130       140       150       160
pF1KB8 SSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRD
                                     ::. ::. : . .: .    : .       
NP_060 QNVLSLFNGYVYSGVETLGKELFMYFGPKALRIHFGMKGFIMINPLEYKYKNGA------
              70        80        90       100       110           

              170       180           190         200         210  
pF1KB8 PSPRLVLHFGGGGFLAFYNCQL----SWSSSPVVT--PTCDILSEKFH--RGQALEALGQ
        :: : ...    .. :.. ..    :  :.  .      :. : .:   :...     .
NP_060 -SPVLEVQLTKD-LICFFDSSVELRNSMESQQRIRMMKELDVCSPEFSFLRAESEVKKQK
          120        130       140       150       160       170   

            220       230       240       250       260       270  
pF1KB8 AQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREVLVDHVVEFSTAWL
       .. .  .:.::  . :.:::::::::. .:.::      :.  . . :.  . .::  . 
NP_060 GRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQIHHLMKMIRDFSILFY
           180       190       200       210       220       230   

            280         290        300       310       320         
pF1KB8 QGKFQGRP--QHTQVYQKEQCPAGH-QVMKEAFGPEDGLQRLTWWCPQCQPQLSEEPEQC
       . .  :    .: .::.. .:   : ..    :: ..   :.:..::.:: .  .. . :
NP_060 RCRKAGLALSKHYKVYKRPNCGQCHCRITVCRFGDNN---RMTYFCPHCQKENPQHVDIC
           240       250       260       270          280       290

     330                                                           
pF1KB8 QFS                                                         
       ..                                                          
NP_060 KLPTRNTIISWTSSRVDHVMDSVARKSEEHWTCVVCTLINKPSSKACDACLTSRPIDSVL
              300       310       320       330       340       350

>>XP_006720742 (OMIM: 608844) PREDICTED: endonuclease 8-  (433 aa)
 initn: 186 init1: 108 opt: 174  Z-score: 171.4  bits: 40.4 E(85289): 0.0083
Smith-Waterman score: 178; 27.3% identity (51.0% similar) in 245 aa overlap (31-254:13-243)

               10        20        30        40           50       
pF1KB8 MPEGPLVRKFHHLVSPFVGQQVVKTGGSSKKLQPASLQSLW---LQDTQVHGKKLFLRFD
                                     .:::   .. :   :. ...::.:  :  .
XP_006                   MRSVSEGSREEVRLQPRPRKD-WDFRLNAVEAHGRKRTLPPS
                                 10        20         30        40 

        60           70             80        90       100         
pF1KB8 LDEEMGPP---GSSPTPEPPQKEV-----QKEGAADPKQVGEPSGQKTLDGSSRSAEL--
       :    ::    .:. . :  .  :     .: ...   .:   :.   ...:.:. ::  
XP_006 LRMPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRL
              50        60        70        80        90       100 

           110       120       130       140        150       160  
pF1KB8 ----VPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVW-VNDFSRAKKANKRGDWRDPS
           .: .. ..: :            :   ::. ::   :      ..:. :     :.
XP_006 ILSPLPGAQPQQEPLA-----------LVFRFGMSGSFQLVPREELPRHAHLRFYTAPPG
             110                  120       130       140       150

            170       180         190       200       210       220
pF1KB8 PRLVLHFGGGGFLAFYNCQLSWSSS--PVVTPTCDILSEKFHRGQALEALGQAQPVCYTL
       :::.: :     .. ..   .:. .  : :    . . :.  :. : .:. .  :.: .:
XP_006 PRLALCFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAFDR--PICEAL
              160       170       180       190       200          

              230       240        250       260       270         
pF1KB8 LDQRYFSGLGNIIKNEALYRAGIHPLSLG-SVLSASRREVLVDHVVEFSTAWLQGKFQGR
       ::::.:.:.:: .. : :::  : :.  . ::: :                         
XP_006 LDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDL
      210       220       230       240       250       260        

     280       290       300       310       320       330         
pF1KB8 PQHTQVYQKEQCPAGHQVMKEAFGPEDGLQRLTWWCPQCQPQLSEEPEQCQFS       
                                                                   
XP_006 LELCHSVPKEVVQLGGKGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDP
      270       280       290       300       310       320        




332 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 10:11:39 2016 done: Fri Nov  4 10:11:40 2016
 Total Scan time:  7.230 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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