GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:02:47

Sequence gi568815589f:96350280_96590035 : 239756 bp : 43.33% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -   2026   2021    6                               1.05
 1.04 Term -   3601   3515   87  1  0   86   49    64 0.059  -0.04
 1.03 Intr -  14271  14185   87  0  0  107  115    17 0.169   6.47
 1.02 Intr -  18026  17993   34  1  1   91  109     7 0.104   1.33
 1.01 Init -  33355  33198  158  1  2   70   76   418 0.629  36.18
 1.00 Prom -  35597  35558   40                              -4.46

 2.05 PlyA -  35686  35681    6                               1.05
 2.04 Term -  38180  37958  223  1  1   78   33   299 0.999  19.79
 2.03 Intr -  42279  42119  161  0  2   32   55   152 0.025   5.09
 2.02 Intr -  44663  44544  120  2  0   72   64    91 0.025   5.79
 2.01 Init -  67753  67334  420  1  0   67  105   737 0.908  69.69
 2.00 Prom -  77530  77491   40                              -3.76

 3.00 Prom +  81832  81871   40                              -3.86
 3.01 Init + 100001 100349  349  1  1   92   75   649 0.977  59.35
 3.02 Intr + 108100 108262  163  2  1   84   53   128 0.899   7.93
 3.03 Intr + 115058 115219  162  2  0   90  101    27 0.751   3.29
 3.04 Intr + 115431 115499   69  0  0   92   96    26 0.656   2.10
 3.05 Intr + 134183 134354  172  2  1   59   69   175 0.417  12.65
 3.06 Intr + 137720 137995  276  1  0   61   66   122 0.652   5.01
 3.07 Intr + 138539 138708  170  1  2  106   36   128 0.418   8.14
 3.08 Intr + 141472 141622  151  1  1   52   19   107 0.130   0.36
 3.09 Intr + 142741 142852  112  0  1   70   49    34 0.039  -2.35
 3.10 Intr + 146378 146592  215  0  2   28   46   186 0.568   6.83
 3.11 Term + 154077 154280  204  2  0  114   40   119 0.818   7.07
 3.12 PlyA + 156250 156255    6                               1.05

 4.13 PlyA - 157138 157133    6                               1.05
 4.12 Term - 158570 158309  262  1  1   96   37    50 0.211  -4.30
 4.11 Intr - 159510 159394  117  2  0   72  100    21 0.205   1.28
 4.10 Intr - 163321 163240   82  2  1   70   92   120 0.494   9.30
 4.09 Intr - 164798 164791    8  1  2  126   98     0 0.413  -1.82
 4.08 Intr - 172324 172227   98  1  2   49   94    66 0.367   2.11
 4.07 Intr - 173141 172982  160  1  1   39   46    83 0.444  -0.81
 4.06 Intr - 173446 173308  139  2  1   90   95    99 0.641  10.32
 4.05 Intr - 183834 183648  187  0  1   17   95   224 0.365  15.26
 4.04 Intr - 188861 188799   63  2  0   59  100    53 0.372   2.51
 4.03 Intr - 214573 214498   76  0  1   45   98    56 0.060   1.82
 4.02 Intr - 215204 215114   91  0  1   47  100    10 0.036  -2.85
 4.01 Init - 216537 216489   49  0  1   80  105    44 0.117   5.03

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  42257  42119  139  0  1   37   55   165 0.965   7.62
S.002 Init + 209405 209470   66  1  0   73  106    35 0.898   4.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:96350280_96590035|GENSCAN_predicted_peptide_1|121_aa
MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLIGRSGSHLEAGGDGLAFGSPGSLLTM
R

>gi568815589f:96350280_96590035|GENSCAN_predicted_CDS_1|366_bp
atgacggccggcggccaggccgaggccgagggcgctggcggggagcccggcgcggcgcgg
ctgccctcgcgggtggcccggctgctgtcggcgctcttctacgggacctgctccttcctc
atcgtgcttgtcaacaaggcgctgctgaccacctacggtttcccgtcaccaattttcctt
ggaattggacagatggcagccaccataatgatactatatgtgtccaagctaaacaaaatc
attcacttccctgattttgataagaaaattcctgtaaagctcatcggccgctcagggtcg
catctagaagcaggtggagatgggctggcatttggcagccctggcagtctgttgactatg
cgctga

>gi568815589f:96350280_96590035|GENSCAN_predicted_peptide_2|307_aa
MIRGFEAPMAENPPPPPPPVIFCHDSPKRVLVSVIRTTPIKPTCGGGGEPEPPPPLIPTS
PGFSDFMVYPWRWGENAHNVTLSPGAAGAAASAALPAAAAAEHSGLRGRGAPPPAASASA
AASGGEDEEEASSPDSGHLKVRGPICVTIQTVEKPLFKVDSSKHISVFTPERNLLFVQKM
VLTLCFEGCLSRFTHANRHCPKHPYARLKREEPTDTLSKHQAADNKAAAEWLARYWEMRE
QRTPTLKGKLVQKADQEQQDPLEYLQSDEEDDEKRGAQRRLQEQRERLHGALALIELANL
TGAPLRQ

>gi568815589f:96350280_96590035|GENSCAN_predicted_CDS_2|924_bp
atgatccggggcttcgaggcgcccatggcggagaacccgccgccgccgccgccgcccgtc
atcttctgccacgactccccgaagcgggtgctggtgtcggtcatcaggacgaccccgatc
aagccaacgtgcggcggtggaggggagccggagccgccgccgccgctcatccccaccagc
cccggcttcagcgacttcatggtgtacccgtggcgctggggcgagaacgcacacaacgtg
acgctcagccctggggccgcgggggccgccgcctcggccgccctgcctgcagccgcagcc
gccgagcactcggggcttcgtggccggggcgcgcccccgcccgccgcctcggcctccgcc
gccgcctcgggaggtgaggacgaggaggaagcgagcagcccagacagcggccacctcaag
gtgagaggccctatctgtgtgactatccagactgtggaaaagcctttgttcaaagtggac
agctcaaaacacatcagcgtcttcacaccggagagaaaccttttgtttgttcagaaaatg
gtgttaaccttgtgttttgaaggctgcctgagcagattcacccatgcaaaccgccactgt
ccgaagcacccctacgccaggctgaagagagaggagcccacggacacactcagcaaacat
caggctgccgacaacaaggccgcggccgagtggctggcgaggtattgggaaatgagagag
cagcgcacccccactttgaaaggcaagctggttcagaaggctgatcaggagcagcaggac
cctctggaataccttcagtctgatgaagaggacgacgagaagagaggggcccagcgccgg
ctgcaggagcagcgggagcgcctgcatggagccctcgcgctcatagagcttgccaacctg
actggggcgccactccgacagtag

>gi568815589f:96350280_96590035|GENSCAN_predicted_peptide_3|680_aa
MKGALGSPVAAAGAAMQESFGCVVANRFHQLLDDESDPFDILREAERRRQQQLQRKRRDE
AAAAAGAGPRGGRSPAGASGHRAGAGGRRESQKERKSLPAPVAQRPDSPGGGLQAPGQKR
TPRRGEQQGWNDSRGPEGMLERAERRSYREYRPYETERQADFTAEKFPDEKPGDRFDRDR
PLRGRGGPRGGMRGRGRGGPGNRVFDAFDQRGKREFERYGGNDKIAVRTEDNMGGCGVRT
WGSGKDTRVPELEVEEETQVQEMTLDEWKNLQEQTRPKPEFNIRKPESTVPSKAVVIHKS
KYRDDLLCSTLQPLSQMSVGMAVDLCVFDAVIVFQMVKDDYEDDSHVFRKPANDITSQLE
INFGNLPRPGRGARGGTRGGRGRIRRAENYGPRAEVVVSLITSPRPIKVSEQRSFFSLKP
DLRVRLYSHWCGYRSAAAFAHYRFTQCHAVPGMYCKNTDSSYPIELLSHVVEDSFGEPGA
RSEPVMGYVCLPGLALADLVVCLDTSDHFLLLISKSMPFQHMGASREGDCCPLKLYCAVL
AGAGKGDPAGSTAQATLKSPLEEVQRTRSRGARPAPSLREAPSSSSFLCPPAREHRGGFS
VLCTAQDKRHWKRFTTLHFQVSNNFQKANKTKIRVRKTTSNLEGSSPDAAAAALFKEKRL
NRSFRFQRSQQSTESKIQTS

>gi568815589f:96350280_96590035|GENSCAN_predicted_CDS_3|2043_bp
atgaagggcgctctggggagtcccgtggctgccgctggcgccgcgatgcaggagagtttc
ggctgcgtggtggccaaccgcttccatcagctgctggacgacgagtcggacccgttcgac
atcctgcgcgaggccgagcgccggcgccagcagcagctgcagcgcaagaggcgcgacgag
gcggcggcggcggccggggccggtccccgcggcggcaggagcccagccggggcctcgggc
cacagagccggcgcgggcggccggagggagtcgcagaaggagcgcaagagcctcccggcg
cccgtcgctcagcggcccgatagccccgggggcggcctgcaggcgccgggccagaagcgg
actcctagaagaggggagcagcaaggatggaatgacagccgtgggccggaggggatgctc
gaaagagctgagcggagatcctacagggaataccgaccctatgagacagagaggcaggca
gacttcacagctgagaagtttccagatgaaaaaccaggtgataggtttgatcgagacaga
ccgttgagaggacgtggaggcccgagagggggtatgcgcggcagaggcagaggtggccct
gggaacagagtttttgacgcttttgaccagagaggaaagcgagaatttgaaagatatggt
gggaatgacaaaatagcagtcagaactgaagacaacatgggtggatgtggagttcgaacc
tggggatcgggtaaagataccagagttcctgagttggaggtagaagaagaaacccaagtt
caagagatgactttagatgagtggaaaaatcttcaagaacagaccagaccaaagcctgag
tttaacatccggaaaccagaatccactgttccttccaaagccgtggtgattcacaagtca
aaatacagagatgatctcctgtgtagcacactgcagccactaagccagatgagtgtgggg
atggctgtggacttgtgcgtgtttgatgctgtaattgtgtttcagatggtaaaagatgac
tatgaggacgattcccatgttttccggaaacccgccaatgacatcacatcccagctggag
attaattttggtaacctccctcgtcctgggcgtggagccagaggaggcacccggggaggc
cggggaaggatcaggagggcagagaactatggacccagagcagaagtggtggtttctttg
atcacatctcctagaccgatcaaggtctcggagcaaaggagtttcttttcattgaagcct
gatctccgtgtgcggctgtattctcactggtgtggctatcggtcagcggctgcttttgct
cattaccggtttacgcagtgccacgcagtgcctggcatgtattgcaaaaacactgacagt
tcctatcccatagagctgttgagtcatgtggttgaagacagttttggggaacccggtgca
cgttctgaacctgtaatgggctatgtttgcttaccagggctagctctcgctgacttggtc
gtgtgcctggatacttcagaccatttccttctgttgatcagcaagtccatgccattccag
cacatgggagcttcacgggaaggagactgctgtcctctgaaactgtactgtgcggtgctg
gcaggcgcaggcaagggagaccccgctggctccaccgcccaggccaccctgaagtccccg
ctggaggaggtgcagcggacccgctcccggggagcccgtcccgcgccctccctccgagaa
gccccttcctccagctccttcctctgcccgccggcccgagagcaccgaggcggcttctct
gtcctgtgtactgcccaggacaagcggcattggaagcgattcacgacgctacactttcag
gtcagtaacaactttcagaaagcaaacaaaaccaaaataagagtcagaaaaaccacttcc
aatctggagggctcctcgcccgatgctgctgctgctgcgctcttcaaggagaagcgtttg
aatcgatcatttcgttttcagagatcccaacagagcactgagtcaaagatccagaccagc
tag

>gi568815589f:96350280_96590035|GENSCAN_predicted_peptide_4|443_aa
MSREGAGAALVAEVIKDRLCFAILYSRPKSASNVHYFSIDNELEYENFYADFGPLNLAMV
YRYCCKINKKLKAMQYGFLNFNSFNLDEYEHYENHNVTTIIRLNKRMYDAKRFTDAGFDH
HDLFFADGSTPTDAIVKEFLDICENAEGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAET
IAWVRICRPGSVIGPQQQFLVMKQTNLWLEGDYFRQKLKGQENGQHRAAFSKLLSGVDDI
SINGVENQDQQEPEPYSDDDEINGVTQGDRLRALKSRRQSKTNAIPLTEYNFTISEISEY
RGSKDAAEKKVNWNIGKRVILQSSVQSCKTSEPNISGSAGITKRTTRSASRKSSVKSFPA
MYIRGFGPRGLISVKLVPSAKQPVSQETLAELGVLCALPFEDSFSSAMSPLHCFVQPYCT
LNTRMGMQQCPGIRIGGLSGTDS

>gi568815589f:96350280_96590035|GENSCAN_predicted_CDS_4|1332_bp
atgagccgggagggcgcgggggcagctttggtagccgaggtgatcaaagatcgcctttgt
tttgccattctctacagcagaccaaagagtgcatcaaatgtacattatttcagcatagat
aatgaacttgaatatgagaacttctacgcagattttggaccactcaatctggcaatggtt
tacagatattgttgcaagatcaataagaaattaaaggcaatgcagtatggcttccttaat
ttcaactcatttaaccttgatgaatatgaacactatgaaaatcacaatgttactaccatt
attcgtctgaataaaaggatgtatgatgccaaacgctttacggatgctggcttcgatcac
catgatcttttctttgcggatggcagcacccctactgatgccattgtcaaagaattccta
gatatctgtgaaaatgctgagggtgccattgcagtacattgcaaagctggccttggtcgc
acgggcactctgatagcctgctacatcatgaagcattacaggatgacagcagccgagacc
attgcgtgggtcaggatctgcagacctggctcggtgattgggcctcagcagcagtttttg
gtgatgaagcaaaccaacctctggctggaaggggactattttcgtcagaagttaaagggg
caggagaatggacaacacagagcagccttctccaaacttctctctggcgttgatgacatt
tccataaatggggtcgagaatcaagatcagcaagaacccgaaccgtacagtgatgatgac
gaaatcaatggagtgacacaaggtgatagacttcgggccttgaaaagcagaagacaatcc
aaaacaaacgctattcctctcacggaatacaatttcactatatctgaaatctcagagtac
cgaggctccaaggatgctgcagagaagaaggtgaactggaatataggcaagagagtaatt
cttcaatccagtgttcagagctgtaaaacatctgaacctaacatttctggcagtgcaggc
attactaaaagaaccaccagatctgcttcaaggaaaagcagtgttaaaagcttccctgcc
atgtatatccgaggctttgggcctaggggccttatcagtgtgaaattagtccccagtgca
aagcagccagtctcccaagagaccttggcagagctgggagttctgtgtgctttgcctttt
gaagactcattcagctctgccatgtctcctctacactgttttgtacaaccttactgcaca
cttaacactcgcatggggatgcagcagtgccccggcataaggattggaggactgtcaggc
actgactcatga