GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:01:43

Sequence gi568815596f:44101200_44330715 : 229516 bp : 40.69% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5024   5107   84  1  0   93   60    62 0.681   4.77
 1.02 Term +   8021   8179  159  1  0   51   45   119 0.456   0.86
 1.03 PlyA +   9172   9177    6                               1.05

 2.00 Prom +  17694  17733   40                              -3.95
 2.01 Init +  21000  21131  132  2  0   45   59   133 0.449   6.29
 2.02 Intr +  35915  35955   41  1  2   98   68    44 0.008  -0.50
 2.03 Intr +  51626  51832  207  2  0   40   78    90 0.014   0.47
 2.04 Intr +  65334  65454  121  0  1   62    0   160 0.652   4.18
 2.05 Intr +  67748  67913  166  1  1   60   41   212 0.340  12.31
 2.06 Term +  68383  68588  206  2  2  103   40   130 0.488   6.25
 2.07 PlyA +  69147  69152    6                               1.05

 3.04 PlyA -  69318  69313    6                               1.05
 3.03 Term -  70013  69814  200  0  2   60   47   137 0.189   3.38
 3.02 Intr -  82197  82102   96  1  0   85   29    90 0.070   1.86
 3.01 Init -  86708  86693   16  2  1   81   95    21 0.666   1.08
 3.00 Prom -  93589  93550   40                              -5.05

 4.00 Prom +  98570  98609   40                              -4.65
 4.01 Init + 100001 100846  846  1  0   81   95   701 0.982  64.81
 4.02 Intr + 108011 108128  118  1  1   85  116   111 0.950  12.72
 4.03 Intr + 116768 116879  112  0  1   -1  108    98 0.093   1.42
 4.04 Intr + 117281 117338   58  2  1  104   98    23 0.985   2.87
 4.05 Intr + 129214 129505  292  0  1    7   12   387 0.172  18.78
 4.06 Intr + 147055 147150   96  2  0    6   97   120 0.229   3.76
 4.07 Intr + 159558 160006  449  1  2   67   86   173 0.239   7.14
 4.08 Term + 169230 169778  549  2  0    8   42   465 0.794  27.21
 4.09 PlyA + 169932 169937    6                               1.05

 5.00 Prom + 172479 172518   40                              -7.75
 5.01 Init + 174337 174766  430  0  1   85   83   503 0.991  45.96
 5.02 Intr + 179517 179696  180  1  0   85  115   174 0.993  18.72
 5.03 Intr + 180188 180342  155  0  2   42  106   102 0.903   6.27
 5.04 Intr + 184833 185004  172  2  1   84   36    84 0.012   1.39
 5.05 Intr + 185290 185454  165  2  0   41  101   166 0.008  12.21
 5.06 Intr + 191437 191645  209  2  2   10   95    76 0.008  -1.63
 5.07 Intr + 198772 198891  120  0  0  106   60   103 0.464   9.07
 5.08 Term + 199804 199968  165  0  0   63   36   174 0.369   6.63
 5.09 PlyA + 200864 200869    6                               1.05

 6.00 Prom + 201123 201162   40                              -6.25
 6.01 Init + 201374 201438   65  1  2   85   68    62 0.827   4.57
 6.02 Intr + 202944 203139  196  0  1   97  115   168 0.985  18.90
 6.03 Intr + 204787 204924  138  0  0   64   75    97 0.977   5.74
 6.04 Intr + 211387 211554  168  0  0   53   87   239 0.940  19.52
 6.05 Intr + 212636 212752  117  1  0   49   95    47 0.536   1.24
 6.06 Term + 219000 219440  441  2  0   34   48   207 0.843   5.57
 6.07 PlyA + 219605 219610    6                               1.05

 7.07 PlyA - 219655 219650    6                               1.05
 7.06 Term - 220246 220157   90  1  0   90   47   137 0.918   6.54
 7.05 Intr - 220701 220628   74  1  2   63   95     5 0.738  -3.09
 7.04 Intr - 221655 221532  124  0  1   94   97   209 0.896  21.64
 7.03 Intr - 222212 222063  150  2  0   80   72   158 0.996  12.84
 7.02 Intr - 225729 225513  217  2  1   73  105   150 0.819  12.78
 7.01 Intr - 227913 227738  176  0  2   70  109    94 0.555   7.52

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  64895  64965   71  1  2   69   50    78 0.857   2.67
S.002 Init + 116773 116879  107  0  2   61  108    83 0.824   7.34


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:44101200_44330715|GENSCAN_predicted_peptide_1|80_aa
MAFVNRNGTGRSVAVKTTRGYSVAILVLSQYSFMVTPEWPNMNGKSLHVSEFQKQMRTKH
MQGRGEIIIMNAEVDNSDSL

>gi568815596f:44101200_44330715|GENSCAN_predicted_CDS_1|243_bp
atggcatttgtaaaccgtaatggcactggtaggagtgtagcagtgaagacgaccagaggt
tactctgtggccatcttggttttgtctcagtattcctttatggtaacaccagaatggcct
aacatgaatgggaagtcattacatgtatcagagtttcagaagcagatgagaacaaaacat
atgcagggcagaggggagatcatcatcatgaatgcagaagttgataacagtgactcatta
tga

>gi568815596f:44101200_44330715|GENSCAN_predicted_peptide_2|290_aa
MFINITTNLIGKDFKYGEAVKFTVANTGFRKFRFFYLKAPIRSLDELSFSGSCDIDARLG
DSETLSQKTKKEKKVQFTPNVTLRTGEPLAIFSTFILGKDQTQVFLPETPGDKFWEVSLR
HLSFGVRDLKGLYEDIRKELLISTTELQEMSEYYFDGKGKAFRPIIGQLRGSFLPARLES
LILRVRWLEDAPERRGCGGGGGGGRIGNGARVERRRHRRRRRLCKHLFHTKALGLPQALA
LLFLVHALFENTIFYHSFPHQLLPYSALHFTSLLNRLSLLSMRSTLAFPP

>gi568815596f:44101200_44330715|GENSCAN_predicted_CDS_2|873_bp
atgttcattaacatcaccaccaatctcattggaaaggactttaaatacggtgaagctgtc
aagttcacagtagcaaacacaggttttcgaaaattcagatttttttacttgaaagctcca
attcgatcactggatgagctgagcttttctggcagctgtgatattgatgccaggctgggt
gacagtgagactctgtctcaaaaaacaaaaaaagaaaagaaagtccagtttacacccaat
gtgaccttgcgaacaggtgaacctttggccattttttctaccttcatacttggcaaggat
cagacccaagtctttcttcctgaaactccaggggacaaattctgggaggtctccttgagg
cacctttcctttggcgtgagagacttgaaaggtctgtatgaggacattagaaaggaactg
ctcatatcaacaacagaacttcaggaaatgtctgagtactactttgatggaaaaggaaaa
gcctttcgaccaattattgggcagttgcgggggagtttcctgccggcgcggctggagtct
ctgattctcagggttcggtggttggaagatgctccagagagacgaggctgcggcggagga
ggtggcggcggccgaatcggcaacggcgctagggtggagagaaggcggcatcggcggcgg
cggcggctctgcaagcatctctttcacacgaaagcactggggctaccccaagccttggcg
cttctcttcctggtgcatgccctgtttgaaaacactatcttttaccattcgtttcctcat
cagcttctgccctactctgcgctccacttcacttccttgttaaatcgtctttctctgctg
tctatgcgttctaccctcgccttccctccttag

>gi568815596f:44101200_44330715|GENSCAN_predicted_peptide_3|103_aa
MVAGTYICFQNHTGRMFKAKCGYSSSKWSDFIECHLAKSSQKSDTQCKKTVLKALLVTSK
RTITSTNPEDNVLETGEILQYESSNKNTRANIQQQKEPLQKLL

>gi568815596f:44101200_44330715|GENSCAN_predicted_CDS_3|312_bp
atggtggcgggcacctatatttgtttccaaaaccacacgggaagaatgttcaaggcaaaa
tgtggatattcctcatctaaatggtctgatttcatcgaatgtcacttggcaaagtcttca
cagaaatcagacacccagtgtaagaaaacggtgttgaaagctctgctggtcacttcaaag
agaacaatcacttcaacaaatccagaggataatgtactagaaactggggaaatcttacag
tatgaaagctcaaataaaaatactcgtgctaatatacagcaacaaaaagaaccactgcag
aaactgttgtaa

>gi568815596f:44101200_44330715|GENSCAN_predicted_peptide_4|839_aa
MGAFLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYD
GHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNF
SDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERI
QNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIIL
ACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNAPK
VSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENIPNLPPGGGLAGKR
NVIEAVYSRLNPHRESDGASDEAEESGSQGKLVEALRQMRINHRGNYRQLLEEMLTSYRL
AKVEGEESPAEPAATATSSNSDAGNPVTMQESHTESESGLAELDSSNEDAGTKMSAASQL
QLSYYGRQEAQCESNSCVCHRQPFSRAVLEVLARAIRQEKEIKGIQLGKEEFKLSLFADD
MIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIAS
KRIKYLGIQLTRDLKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIVKMAILPKRDV
TANCPGSWRFEQRIGQNTQQRKNEATKERKQLSRLSARRRPRCNFLRSSRIRVHPTPAAS
TMPPKFHPNEIKVVYFTCTGVEVGATSALAPKIGPAGLSPKEVGDDIAKVTGDWKGLRIT
VKLTIQNRQAQIEVVPSASALIIKRNYQETERNRKTLNTGGISLFMRSSTLLDRCSTDP

>gi568815596f:44101200_44330715|GENSCAN_predicted_CDS_4|2520_bp
atgggtgcatttttggataaacccaaaactgaaaaacataatgctcatggtgctgggaat
ggtttacgttatggcctgagcagcatgcaaggatggagagtggaaatggaagatgcacac
acagctgttgtaggtattcctcacggcttggaagactggtcattttttgcagtttatgat
ggtcatgctggatcccgagtggcaaattactgctcaacacatttattagaacacatcact
actaacgaagactttagggcagctggaaaatcaggatctgctcttgagctttcagtggaa
aatgttaagaatggtatcagaactggatttttgaaaattgatgaatacatgcgtaacttt
tcagacctcagaaacgggatggacaggagtggttcaactgcagtgggagttatgatttca
cctaagcatatctactttatcaactgtggtgattcacgtgctgttctgtataggaatgga
caagtctgcttttctacccaggatcacaaaccttgcaatccaagggaaaaggagcgaatc
caaaatgcaggaggcagcgtgatgatacaacgtgttaatggttcattagcagtatctcgt
gctctgggggactatgattacaagtgtgttgatggcaagggcccaacagaacaacttgtt
tctccagagcctgaggtttatgaaattttaagagcagaagaggatgaatttatcatcttg
gcttgtgatgggatctgggatgttatgagtaatgaggagctctgtgaatatgttaaatct
aggcttgaggtatctgatgacctggaaaatgtgtgcaattgggtagtggacacttgttta
cacaagggaagtcgagataacatgagtattgtactagtttgcttttcaaatgctcccaag
gtctcagatgaagcggtgaaaaaagattcagagttggataagcacttggaatcacgggtt
gaagagattatggagaagtctggcgaggaaggaatgcctgatcttgcccatgtcatgcgc
atcttgtctgcagaaaatatcccaaatttgcctcctgggggaggtcttgctggcaagcgt
aatgttattgaagctgtttatagtagactgaatccacatagagaaagtgatggggcctcc
gatgaagcagaggaaagtggatcacagggaaaattggtggaagctctcaggcaaatgaga
attaatcataggggaaactaccgacaacttctggaggagatgctgactagttacaggcta
gctaaagtagagggagaagaaagccctgctgaaccagctgccacagctacttcttcgaac
agtgatgctggaaacccagtgacaatgcaggaaagccatactgaatcagaaagtggtctt
gctgaattagacagctctaatgaagatgcagggacaaagatgagtgctgcatcgcagcta
caactcagttactatggaagacaggaagcacagtgtgagagcaactcctgtgtctgccac
aggcagccattctccagagcagtgttggaagttctggccagggcaattaggcaggagaag
gaaataaagggtattcaattaggaaaagaggaattcaaattgtccctgtttgcagatgac
atgattgtatatctagaaaaccccattgtctcagcccaaaatctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatac
accaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttca
aagagaataaaatacctaggaatccaacttacaagggatctgaaggacctcttcaaggag
aactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattcca
tgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaagagggacgtg
actgcaaattgtccaggttcttggcgttttgaacaaagaattggacaaaacacgcagcaa
agaaagaatgaagcaacaaaagaacgaaagcagctctctcggctttcggctcggaggagg
ccaaggtgcaactttcttcggtcgtctcgaatccgggttcatccgacaccagccgcctcc
accatgccgccgaagttccaccccaatgagatcaaagtcgtatacttcacgtgcactgga
gttgaagtcggtgccacttctgctctggcccccaagattggccccgcgggtctgtctcca
aaagaggttggtgatgacattgccaaggtaacgggtgactggaagggcctgaggattaca
gtgaaactgaccattcagaacagacaggcccagattgaagtggtaccttctgcctccgcc
ctgatcatcaaaaggaactaccaagagacagaaagaaacagaaaaacattaaacacaggg
ggaatatcactttttatgagatcgtcaacattgctcgacagatgcagcactgatccttag

>gi568815596f:44101200_44330715|GENSCAN_predicted_peptide_5|531_aa
MAEDKSKRDSIEMSMKGCQTNNGFVHNEDILEQTPDPGSSTDNLKHSTRGILGSQEPDFK
GVQPYAGMPKEVLFQFSGQARYRIPREILFWLTVASVLVLIAATIAIIALSPKCLDWWQE
GPMYQIYPRSFKDSNKDGNGDLKGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDF
REVDPIFGTMEDFENLVAAIHDKGLKLIIDFIPNHTSDKHIWFQLSRTRTGKYTDYYIWH
DCTHENGKTIPPNNWLSVYGNSSWHFDEVRNQCYFHQFMKEQPDLNFRNPDVQEEIKVSI
DTHTDFSINGGLVSCTVPVTVSCAVPVTVSCAVPVTVSCAVPVTVSCAVSVTVSCAVSVT
ELCTVCDEEVRYLRNRHELSEEAWVGVFPAEESVDRDTLEVLGVVQYHWDVIYRAGSDPM
RLERSLGVRSGAPLKALEILRFWLTKGVDGFSLDAVKFLLEAKHLRDEIQVNKTQIPDTV
TQYSELYHDFTTTQVGMHDIVRSFRQTMDQYSTEPGRYRLTTAYALISSQA

>gi568815596f:44101200_44330715|GENSCAN_predicted_CDS_5|1596_bp
atggctgaagataaaagcaagagagactccatcgagatgagtatgaagggatgccagaca
aacaacgggtttgtccataatgaagacattctggagcagaccccggatccaggaagctca
acagacaacctgaagcacagcaccaggggcatccttggctcccaggagcccgacttcaag
ggcgtccagccctatgcggggatgcccaaggaggtgctgttccagttctctggccaggcc
cgctaccgcatacctcgggagatcctcttctggctcacagtggcttctgtgctggtgctc
atcgcggccaccatagccatcattgccctctctccaaagtgcctagactggtggcaggag
gggcccatgtaccagatctacccaaggtctttcaaggacagtaacaaggatgggaacgga
gatctgaaaggtattcaagataaactggactacatcacagctttaaatataaaaactgtt
tggattacttcattttataaatcgtcccttaaagatttcagatatggtgttgaagatttc
cgggaagttgatcccatttttggaacgatggaagattttgagaatctggttgcagccata
catgataaaggtttaaaattaatcatcgatttcataccaaaccacacgagtgataaacat
atttggtttcaattgagtcggacacggacaggaaaatatactgattattatatctggcat
gactgtacccatgaaaatggcaaaaccattccacccaacaactggttaagtgtgtatgga
aactccagttggcactttgacgaagtgcgaaaccaatgttattttcatcagtttatgaaa
gagcaacctgatttaaatttccgcaatcctgatgttcaagaagaaataaaagtgagtata
gatacccacacagacttctccattaatggaggtttagtgagctgtacggtgcctgtgacg
gtgagctgtgcggtgcctgtgacggtgagctgtgcggtgcctgtgacggtgagctgtgcg
gtgcctgtgacggtgagctgtgcggtgtctgtgacggtgagctgtgcggtgtctgtgact
gagctgtgcactgtctgtgacgaggaggtgagatacctgaggaacaggcatgagctaagt
gaagaggcatgggtgggagtgtttccagcagaggaaagcgtggatcgtgacacattagag
gtgctgggagttgtccagtatcactgggatgtgatatatagagcagggagtgacccgatg
agactagagaggtcactgggggtgaggtcaggagcaccactgaaggccctggaaatttta
cggttctggctcacaaagggtgttgatggttttagtttggatgctgttaaattcctccta
gaagcaaagcacctgagagatgagatccaagtaaataagacccaaatcccggacacggtc
acacaatactcggagctgtaccatgacttcaccaccacgcaggtgggaatgcacgacatt
gtccgcagcttccggcagaccatggaccaatacagcacggagcccggcagatacaggttg
accacggcatatgctctcatttcttcccaggcttag

>gi568815596f:44101200_44330715|GENSCAN_predicted_peptide_6|374_aa
MHLSINMLPQIAKASIDRSHFRFMGTEAYAESIDRTVMYYGLPFIQEADFPFNNYLSMLD
TVSGNSVYEVITSWMENMPEGKWPNWMTVHWLRAEAGSQHPCTVPTSHGGAQAQGLFVTG
AVVIRMQFSDLPKIGGPDSSRLTSRLGNQYVNVMNMLLFTLPGTPITYYGEEIGMGNIVA
ANLNESYDINTLRSKSPMQWDNSSNAGFSEASNTWLPTNSDYHTVNVDVQKTQPRSALKL
YQDLSLLHANELLLNRGWFCHLRNDSHYVVYTRELDGIDRIFIVVLNFGESTLLNLHNMI
SGLPAKMRIRLSTNSADKGSKVDTSGIFLDKGEGLIFEHNTKNLLHRQTAFRDRCFVSNR
ACYSSVLNILYTSC

>gi568815596f:44101200_44330715|GENSCAN_predicted_CDS_6|1125_bp
atgcacttatccataaatatgctgcctcaaatagctaaagccagcattgatcggagtcat
ttcaggttcatggggactgaagcctatgcagagagtattgacaggaccgtgatgtactat
ggattgccatttatccaagaagctgattttcccttcaacaattacctcagcatgctagac
actgtttctgggaacagcgtgtatgaggttatcacatcctggatggaaaacatgccagaa
ggaaaatggcctaactggatgacagttcactggttaagggcagaggcaggttcccagcat
ccttgcacggtgcccacctcacacggaggtgctcaggctcagggtttgtttgttactggt
gctgttgttattcgtatgcagttcagcgacttaccaaagattggtggaccagacagttca
cggctgacttcgcgtttggggaatcagtatgtcaacgtgatgaacatgcttcttttcaca
ctccctggaactcctataacttactatggagaagaaattggaatgggaaatattgtagcc
gcaaatctcaatgaaagctatgatattaatacccttcgctcaaagtcaccaatgcagtgg
gacaatagttcaaatgctggtttttctgaagctagtaacacctggttacctaccaattca
gattaccacactgtgaatgttgatgtccaaaagactcagcccagatcggctttgaagtta
tatcaagatttaagtctacttcatgccaatgagctactcctcaacaggggctggttttgc
catttgaggaatgacagccactatgttgtgtacacaagagagctggatggcatcgacaga
atctttatcgtggttctgaattttggagaatcaacactgttaaatctacataatatgatt
tcgggccttcccgctaaaatgagaataaggttaagtaccaattctgccgacaaaggcagt
aaagttgatacaagtggcatttttctggacaagggagagggactcatctttgaacacaac
acgaagaatctccttcatcgccaaacagctttcagagatagatgctttgtttccaatcga
gcatgctattccagtgtactgaacatactgtatacctcgtgttag

>gi568815596f:44101200_44330715|GENSCAN_predicted_peptide_7|276_aa
DGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWILAYCHVRG
GGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCNS
NPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIKP
QHYPSIHITAYENDERVPLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDIQPGGNHV
IEDSHKKITAQIKFLYEELGLDSTSVFEDLKKYLKF

>gi568815596f:44101200_44330715|GENSCAN_predicted_CDS_7|831_bp
gatggaaaattagtgccaatgactgttttccacaaaactgactctgaggacttgcagaag
aaacctctcttggtacatgtatatggagcttatggaatggatttgaaaatgaatttcagg
cctgagaggcgggtcctggtggatgatggatggatattagcatactgccatgttcgaggt
ggtggtgagttaggcctccagtggcacgctgatggccgcctaactaaaaaactcaatggc
cttgctgatttagaggcttgcattaagacgcttcatggccaaggcttttctcagccaagt
ctaacaaccctgactgctttcagtgctggaggggtgcttgcaggagcattgtgtaattct
aatccagagctggtgagagcggtgactttggaggcacctttcttggatgttctcaacacc
atgatggacactacacttcctctgacattagaagaattagaagaatgggggaatccttca
tctgatgaaaaacacaagaactacataaaacgttactgtccctatcaaaatattaaacct
cagcattatccttcaattcacataacggcatatgaaaacgatgaacgggtacctctgaaa
ggaattgtaagttatactgagaaactcaaggaagccatcgcggagcatgctaaggacaca
ggtgaaggctatcagacccctaatattattctagatattcagcctggaggcaatcatgta
attgaggattctcacaaaaagattacagcccaaattaaattcctgtacgaggaacttgga
cttgacagcaccagtgttttcgaggatcttaagaaatacctgaaattctga