GENSCAN 1.0	Date run:  4-Nov-116	Time: 09:58:19

Sequence gi568815579f:8151077_8362106 : 211030 bp : 51.28% C+G : Isochore 3 (51 - 57 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  16261  16361  101  1  2   50   94    87 0.080   5.75
 1.02 Intr +  40525  40602   78  2  0  126   91   -25 0.281   1.62
 1.03 Term +  58419  58720  302  1  2   83   52   141 0.491   5.73
 1.04 PlyA +  59644  59649    6                               1.05

 2.00 Prom +  59927  59966   40                              -6.30
 2.01 Sngl +  63806  64039  234  1  0   74   43   233 0.841  12.80
 2.02 PlyA +  70420  70425    6                               1.05

 3.00 Prom +  82431  82470   40                              -3.21
 3.01 Init +  89066  89083   18  1  0   90   97     6 0.472   1.69
 3.02 Intr +  89410  89487   78  0  0   74  100     9 0.499   0.94
 3.03 Intr +  99968 100173  206  1  2  113  105   213 0.885  24.02
 3.04 Intr + 103423 103540  118  1  1   73   78    90 0.990   7.47
 3.05 Intr + 104531 104649  119  1  2  100  115   174 0.925  21.07
 3.06 Intr + 104746 104803   58  1  1   98   94    85 0.993   9.48
 3.07 Intr + 105542 105634   93  1  0   92  100    69 0.975   9.16
 3.08 Intr + 105873 106001  129  2  0   72   64   247 0.999  22.10
 3.09 Intr + 106803 106909  107  2  2  120   81   145 0.987  16.51
 3.10 Intr + 110612 110768  157  2  1   88   80   310 0.999  30.73
 3.11 Term + 110854 111033  180  0  0  136   42   128 0.920  10.93
 3.12 PlyA + 111836 111841    6                               1.05

 4.03 PlyA - 118588 118583    6                               1.05
 4.02 Term - 128617 128363  255  1  0   14   48   217 0.163   6.22
 4.01 Init - 142417 142400   18  1  0  111   58    40 0.001   1.35
 4.00 Prom - 145478 145439   40                              -3.11

 5.06 PlyA - 148199 148194    6                              -0.45
 5.05 Term - 151529 151387  143  0  2  132   55   128 0.999  12.30
 5.04 Intr - 151904 151701  204  0  0   76   99   182 0.850  17.80
 5.03 Intr - 153012 152779  234  1  0   66   56   242 0.950  16.99
 5.02 Intr - 154080 153955  126  1  0   84   73   161 0.999  15.36
 5.01 Init - 157214 157073  142  2  1   80  109   194 0.713  18.98
 5.00 Prom - 157547 157508   40                              -2.61

 6.19 PlyA - 157621 157616    6                               1.05
 6.18 Term - 160519 160429   91  0  1   95   47    72 0.879   1.29
 6.17 Intr - 165569 165420  150  1  0  121   78   160 0.947  18.09
 6.16 Intr - 169830 169781   50  0  2  132   89   105 0.762  12.97
 6.15 Intr - 170337 170232  106  2  1   61   45   149 0.554   8.62
 6.14 Intr - 171047 170847  201  1  0   37   72   171 0.701   9.32
 6.13 Intr - 171734 171585  150  1  0   50  100    38 0.651   0.99
 6.12 Intr - 171846 171767   80  0  2  100   63    67 0.944   4.24
 6.11 Intr - 173471 173373   99  2  0   95   99   170 0.999  19.61
 6.10 Intr - 173754 173554  201  0  0   93   64   292 0.999  27.30
 6.09 Intr - 174020 173875  146  0  2   82   96   241 0.990  24.81
 6.08 Intr - 178889 178796   94  2  1   91   95    -7 0.411   0.34
 6.07 Intr - 182154 181921  234  0  0  103   59   306 0.291  27.62
 6.06 Intr - 182732 182648   85  1  1  124   69    52 0.999   7.22
 6.05 Intr - 183040 182834  207  0  0   70   83   348 0.521  31.22
 6.04 Intr - 183343 183244  100  2  1   81   44   135 0.999   8.07
 6.03 Intr - 184716 183424 1293  1  0  110  100  1527 0.979 144.17
 6.02 Intr - 186780 186719   62  2  2  105  117    84 0.485  11.87
 6.01 Init - 189469 189426   44  1  2   67  103    18 0.277   1.33

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  23012  23070   59  1  2   40  106    59 0.817   3.63
S.002 Intr + 122955 123073  119  0  2   81   39    97 0.935   4.71
S.003 Intr + 137818 137936  119  1  2   81   39    97 0.891   4.71


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815579f:8151077_8362106|GENSCAN_predicted_peptide_1|160_aa
XKLQQEVTEQQNRDLIQVSVEGAAARPCGEVKCAAPPIENNQEWPGMVALAYNLSTLGSP
GKRAPRAANTAPNATLTAVPGPASAAMAAPARPPLAAGLQPPSPRRGLSPSGLPIMAVSP
SYPRSPTRAGAQRVPEDAAVKRAGASRGDPGLVTRGNPDV

>gi568815579f:8151077_8362106|GENSCAN_predicted_CDS_1|483_bp
nncaaattgcaacaggaggtcacagagcaacagaaccgagatctgatccaagtgtctgtg
gagggtgcagctgccagaccctgtggcgaggtcaaatgtgcagcccctccgatagaaaac
aaccaggaatggccaggcatggtggctcttgcctataatctcagcactttgggaagccca
ggtaagcgagcaccccgcgccgcgaacaccgccccgaacgccaccctcacggcggtcccc
ggccccgcctccgcggccatggcggccccagcccggcccccactcgcagctgggctccag
cccccatcaccccgccggggactgtccccctcggggcttcccatcatggccgtctccccg
agctatccgcgctcccccacgagggccggggcgcaacgggtgcccgaggacgcggctgtg
aaacgggctggagcgagtaggggcgatcctggcctcgtgacgcgggggaatccggatgtg
tga

>gi568815579f:8151077_8362106|GENSCAN_predicted_peptide_2|77_aa
MKGSGEEVGGEEEEEREEDEGEEREEGEEEKKEEEGEEREEEEEKKEEEGEDEEEEATAA
ASGQAARAGWRSQDVLR

>gi568815579f:8151077_8362106|GENSCAN_predicted_CDS_2|234_bp
atgaagggcagtggggaggaggtgggaggggaggaggaagaggaaagggaggaagacgag
ggggaggagagggaggagggggaggaggagaaaaaggaagaggagggggaggagagggag
gaggaggaggagaaaaaggaagaggagggggaggacgaggaggaagaagcaacggcagca
gccagtgggcaagcagccagagctggatggaggagccaggacgttctcagatag

>gi568815579f:8151077_8362106|GENSCAN_predicted_peptide_3|420_aa
MVQVSLHVTCSRLSLWPQESGDPRQRARLQGRTSQLTGTCVHRMLSSFNEWFWQDRFWLP
PNVTWTELEDRDGRVYPHPQDLLAALPLALVLLAMRLAFERFIGLPLSRWLGVRDQTRRQ
VKPNATLEKHFLTEGHRPKEPQLSLLAAQCGLTLQQTQRWFRRRRNQDRPQLTKKFCEAS
WRFLFYLSSFVGGLSVLYHTLKPSLYWWYLLELGFYLSLLIRLPFDVKRKDFKEQVIHHF
VAVILMTFSYSANLLRIGSLVLLLHDSSDYLLEACKMVNYMQYQQVCDALFLIFSFVFFY
TRLVLFPTQILYTTYYESISNRGPFFGYYFFNGLLMLLQLLHVFWSCLILRMLYSFMKKG
QMEKDIRSDVEESDSSEEAAAAQEPLQLKNGAAGGPRPAPTDGPRSRVAGRLTNRHTTAT

>gi568815579f:8151077_8362106|GENSCAN_predicted_CDS_3|1263_bp
atggtacaagtgagcttgcatgtcacgtgctcccgcctgagcctctggccgcaggaatca
ggtgaccccaggcagcgggccaggctgcaggggcggacctcccagctaactggaacctgt
gtccacagaatgctgtccagtttcaacgagtggttttggcaggacaggttctggttacca
cccaatgtcacgtggacagagctagaagaccgggatggccgtgtctacccccacccccag
gacttgttggcagccctgcccctggcgctggtcctcctggccatgcgccttgcctttgag
agattcattggcctgcccctgagccggtggctgggtgtgagggatcagaccaggaggcaa
gtgaagcccaacgccacgctggagaaacacttcctcacggaagggcacaggcccaaggag
ccccagctgtctctcctggccgcccagtgtggcctcacgctgcagcagacccagcgatgg
ttccggagacgccggaaccaggatcgaccccagctgaccaagaagttctgtgaggccagc
tggaggtttctcttctacctgtcctccttcgtgggcggcctctcggtcctgtaccacact
ctgaagccatccctgtactggtggtacctcttggagctgggtttctacctctcactgcta
atcaggctgccctttgatgtcaagcgcaaggatttcaaggagcaggtgatacaccacttc
gtggcggtcatcctgatgaccttctcctacagtgccaacctgctgcgcattggctctctg
gtgctgctgttacacgattcctctgactacctgctggaggcctgtaagatggtcaactac
atgcagtatcagcaagtgtgcgacgctctcttcctcatcttctcctttgtcttcttctac
acccgactggtcctctttcccacccagatcctctacaccacatactacgagtccatcagc
aacaggggccccttcttcggctactacttcttcaacgggcttctgatgttgctgcagctg
ctgcacgtgttctggtcttgcctcattctgcgcatgctctatagcttcatgaagaagggc
cagatggagaaggacattcgtagtgatgtagaagaatcagactccagtgaggaggcggcg
gcggcccaggaacctctgcagctaaagaacggggcagctggagggcccaggccagccccc
actgatggccctcggagccgggtggccgggcgtctgaccaacaggcacacaacagccaca
tag

>gi568815579f:8151077_8362106|GENSCAN_predicted_peptide_4|90_aa
MARPRLVCSYTPEPERPRTHQKEETTNTSEHQKEQTVDTLPLRTVTFTTRVCGFILEVSE
TKTPPILDTLLHRVLIQSAWCPYKKKKYGH

>gi568815579f:8151077_8362106|GENSCAN_predicted_CDS_4|273_bp
atggccagaccccgactggtctgtagctacactcctgagccggaaagaccacgaacccac
cagaaggaggaaactacgaacacatccgaacatcagaaggaacaaactgtggacacgctg
cctttaagaactgtaacattcaccacgagggtctgtggcttcattcttgaagtcagtgag
accaagaccccaccaattctggatacactgctacatcgggtcctcatccaatctgcctgg
tgtccctacaagaagaagaaatatggacactaa

>gi568815579f:8151077_8362106|GENSCAN_predicted_peptide_5|282_aa
MSGGWMAQVGAWRTGALGLALLLLLGLGLGLEAAASPLSTPTSAQAAGPSSGSCPPTKFQ
CRTSGLCVPLTWRCDRDLDCSDGSDEEECRIEPCTQKGQCPPPPGLPCPCTGVSDCSGGT
DKKLRNCSRLACLAGELRCTLSDDCIPLTWRCDGHPDCPDSSDELGCGTNEILPEGDATT
MGPPVTLESVTSLRNATTMGPPVTLESVPSVGNATSSSAGDQSGSPTAYGVIAAAAVLSA
SLVTATLLLLSWLRAQERLRPLGLLVAMKESLLLSEQKTSLP

>gi568815579f:8151077_8362106|GENSCAN_predicted_CDS_5|849_bp
atgagcggcggttggatggcgcaggttggagcgtggcgaacaggggctctgggcctggcg
ctgctgctgctgctcggcctcggactaggcctggaggccgccgcgagcccgctttccacc
ccgacctctgcccaggccgcaggccccagctcaggctcgtgcccacccaccaagttccag
tgccgcaccagtggcttatgcgtgcccctcacctggcgctgcgacagggacttggactgc
agcgatggcagcgatgaggaggagtgcaggattgagccatgtacccagaaagggcaatgc
ccaccgccccctggcctcccctgcccctgcaccggcgtcagtgactgctctgggggaact
gacaagaaactgcgcaactgcagccgcctggcctgcctagcaggcgagctccgttgcacg
ctgagcgatgactgcattccactcacgtggcgctgcgacggccacccagactgtcccgac
tccagcgacgagctcggctgtggaaccaatgagatcctcccggaaggggatgccacaacc
atggggccccctgtgaccctggagagtgtcacctctctcaggaatgccacaaccatgggg
ccccctgtgaccctggagagtgtcccctctgtcgggaatgccacatcctcctctgccgga
gaccagtctggaagcccaactgcctatggggttattgcagctgctgcggtgctcagtgca
agcctggtcaccgccaccctcctccttttgtcctggctccgagcccaggagcgcctccgc
ccactggggttactggtggccatgaaggagtccctgctgctgtcagaacagaagacctcg
ctgccctga

>gi568815579f:8151077_8362106|GENSCAN_predicted_peptide_6|1130_aa
MKWVWQMPVSGGLDRVPLTAAAGNMAKFALNQNLPDLGGPRLCPVPAAGGARSPSSPYSV
ETPYGFHLDLDFLKYIEELERGPAARRAPGPPTSRRPRAPRPGLAGARSPGAWTSSESLA
SDDGGAPGILSQGAPSGLLMQPLSPRAPVRNPRVEHTLRETSRRLELAQTHERAPSPGRG
VPRSPRGSGRSSPAPNLAPASPGPAQLQLVREQMAAALRRLRELEDQARTLPELQEQVRA
LRAEKARLLAGRAQPEPDGEAETRPDKLAQLRRLTERLATSERGGRARASPRADSPDGLA
AGRSEGALQVLDGEVGSLDGTPQTREVAAEAVPETREAGAQAVPETREAGVEAAPETVEA
DAWVTEALLGLPAAAERELELLRASLEHQRGVSELLRGRLRELEEAREAAEEAAAGARAQ
LREATTQTPWSCAEKAAQTESPAEAPSLTQESSPGSMDGDRAVAPAGILKSIMKKRDGTP
GAQPSSGPKSLQFVGVLNGEYESSSSEDASDSDGDSENGGAEPPGSSSGSGDDSGGGSDS
GTPGPPSGGDIRDPEPEAEAEPQQVAQGRCELSPRLREACVALQRQLSRPRGVASDGGAV
RLVAQEWFRVSSQRRSQAEPVARMLEGVRRLGPELLAHVVNLADGNGNTALHYSVSHGNL
AIASLLLDTGQSQGRPNPCCKAGPLCTGYPFSPLHLGMCFSYLPESGACEVNRQNRAGYS
ALMLAALTSVRQEEEDMAVVQRLFCMGDVNAKASQTGQTALMLAISHGRQDMVATLLACG
ADVNAQDADGATALMCASEYGRLDTVRLLLTQPGCDPAILDNEGTSALAIALEAEQDEVA
ALLHAHLSSGQPDTQSESPPGSQTATPGEGECGDNGENPQVHCGEISSSVTSAFGAQKGP
GSPAQRLTLAEEKGNFSWGDCGRKGLTLAPPRSIKGVSSLHPPASSQAQRNLRASRSDSK
RVSTSPSRTGPFTLRMMDRLVSSMNSTRTYGSPPEWRKNSPSGGDVTGCALQYRGRKMAS
ATRLIQRLRNWASGHDLQGKLQLRYQEISKRTQPPPKLPVGPSHKLSNNYYCTRDGRRES
VPPSIIMSSQKALVSGKPAESSAVAATEKKAVTPAPPIKRWELSSDQPYL

>gi568815579f:8151077_8362106|GENSCAN_predicted_CDS_6|3393_bp
atgaagtgggtttggcagatgcctgtcagtggaggactggacagggtgcctctgacagct
gctgcaggaaacatggccaagtttgccctgaatcagaacctgcccgacctgggcggcccc
cgcctgtgcccggtccccgccgccgggggcgcacgcagcccgagctcgccctactcggtg
gagacgccctacggcttccacctggacctggacttcctcaagtacatagaggagctggag
cgtggccccgctgcccgccgcgccccgggacccccgacctcgcgccgtccccgcgcgccc
cggcccggcctcgcgggcgcacgtagcccaggcgcctggacatccagcgagtccctggcc
agtgacgacggtggagcaccgggcatactctcccagggcgcgccctcggggctcctgatg
cagccgctgtcgccgcgcgcgcccgtgcgcaacccgcgcgtcgagcacacgctccgggag
accagccggcggctggagctggcgcagacacacgagcgcgcgcccagccccggccgcggg
gtcccgcgcagcccacgcgggtccggccgcagcagccccgcccctaaccttgcccctgct
tcgcccggccctgcccaactgcagctggtgcgcgagcagatggccgcggcgctgcggcgc
ctgcgcgagctcgaggaccaggcgcgaacgctgcccgagctgcaggagcaggtgcgcgcg
ctgcgcgccgagaaggcgcggctgctggccgggcgcgcgcagcccgagccggacggggag
gctgagacgcgcccggacaagctcgcccagctgcggcggctcaccgagcgcctggccacc
tccgagcgcggcggccgtgccagggccagcccccgggctgacagcccagacggcctggct
gcagggcgcagcgagggcgcgctccaggtcctcgacggggaggtcgggagtctcgatggg
acgccccagacccgggaggtggccgccgaggccgtgcccgagacccgagaagcgggtgcc
caggccgtgccggagacccgggaggccggcgtggaggctgcccccgagaccgtggaggcg
gacgcgtgggtgaccgaggcgctgctggggctgcctgcggccgccgagcgcgagctagag
ctgctgcgcgccagtctggagcaccagcgcggggtgagtgagcttctgcggggccggttg
cgggagctggaggaagcccgcgaggctgcggaggaggcagcggcgggggcccgggcccag
ctacgcgaggccaccacccagaccccgtggagctgtgccgaaaaggccgcgcagaccgag
tccccggcagaggcgccctccttgactcaggagagctcgcccggatccatggacggagac
agggccgtggcgcccgcgggcatcctcaaatccatcatgaagaagagagacggcacacct
ggtgcccaacccagctccggacccaagagcctgcagtttgttggggtcctcaacggagag
tacgagagctcctccagcgaggacgccagcgacagcgatggcgacagcgagaacggtggc
gccgagcccccgggtagctcctcgggctccggggatgacagcggcgggggatccgactcg
ggcacccctggccctcccagcggcggggacatccgggaccctgagcccgaggcggaggca
gagcctcagcaggtggcacaggggaggtgcgagctgagcccgcgtctgagggaggcgtgc
gtagcgctgcagcggcagctgagccggccccgcggagtagccagcgacggcggcgcagtg
cgcctcgtggcccaggagtggtttcgagtgtccagccagcggcgctctcaggcggagccc
gtggccaggatgctggaaggggtgaggcgcctgggacccgaactgctggcgcacgtggtg
aacctggcggatggcaacgggaacacggccctgcactacagtgtgtcccacgggaacctg
gccatcgcaagcctgctcctggatacgggtcagagccaagggaggcctaatccttgctgc
aaagcaggtccactgtgcactggttaccccttcagcccattgcacctaggaatgtgcttt
tcctacctgcctgagtctggggcctgcgaggtcaaccgccagaaccgagccggctactcg
gccctcatgctggctgcactcacctctgtgaggcaggaagaggaggacatggctgtggtc
cagagactcttctgcatgggtgatgtcaatgccaaggccagtcagacggggcagacagcc
ctcatgctggccatcagccatggccgacaggacatggtggcaaccctactggcgtgtggg
gctgatgtgaatgcgcaggatgcggatggggccacagcgctgatgtgtgccagtgagtat
gggcgcctggacaccgtgcggctgctgctcacccagccaggctgtgaccctgccatcctg
gacaatgagggcaccagtgccctggccatcgccctggaggctgagcaggatgaggtggcc
gctctgctacatgcccacctgagctcgggccagcccgacacccagagcgagtcaccccct
ggctcccagacagccacacctggtgaaggagaatgcggtgacaatggagagaacccccag
gttcactgtggggagatctcctcgtcagtcacctcagcctttggcgcacagaagggtcca
gggtcccctgctcagaggctaacactggccgaagagaaaggcaatttcagttggggtgac
tgtggcaggaaggggctcactctggccccaccaaggtctatcaaaggggtgtcctctttg
cacccaccagcgagcagccaagctcagcgcaacctccgggcttctcgctctgactccaaa
agggtgagcacgtcgccctcgcgcacggggccttttacattgcggatgatggatcggctc
gtgtcgtccatgaattccacgcgcacctacgggtccccaccggagtggaggaagaacagc
cccagcggtggagacgtcaccggctgcgcccttcagtatcgcggacggaagatggcgtcc
gccacccgtctcatccagcggctgcggaactgggcgtccgggcatgacctgcaggggaag
ctgcagctacgctaccaggagatctccaagcgaactcagcctcctcccaagctccctgtg
ggtcctagccacaagctctccaacaattactattgcactcgcgatggccgccgggaatct
gtgcccccttccatcatcatgtcgtcgcagaaggcgctggtgtcaggcaagccagcagag
agctctgctgtagctgccactgagaagaaggcggtgactccagctcctcccataaagagg
tgggagctgtcctcggaccagccttacctgtga