GENSCAN 1.0	Date run:  4-Nov-116	Time: 09:38:14

Sequence gi568815586r:93310042_93511301 : 201260 bp : 41.66% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3346   3557  212  0  2   92   30   116 0.631   2.99
 1.02 Intr +   4591   4770  180  1  0    8   55   210 0.606   7.76
 1.03 Intr +  51367  51520  154  1  1   64   90    35 0.012   0.45
 1.04 Intr +  55979  56020   42  1  0   43  107    58 0.244   0.72
 1.05 Intr +  61035  61190  156  2  0   62   67   104 0.522   4.99
 1.06 Intr +  68086  68380  295  0  1   17   75   225 0.029   9.76
 1.07 Intr +  68567  68652   86  0  2   68   96    29 0.033   0.32
 1.08 Intr +  84475  84678  204  0  0   55   78   166 0.394  10.77
 1.09 Intr +  88727  88814   88  1  1   38  111    65 0.517   2.42
 1.10 Term +  89136  89338  203  1  2   98   44    85 0.893   1.67
 1.11 PlyA +  89501  89506    6                              -0.45

 2.08 PlyA -  89664  89659    6                               1.05
 2.07 Term -  89744  89692   53  0  2   96   43    56 0.008  -1.49
 2.06 Intr - 100833 100693  141  1  0   82   70   142 0.758  11.20
 2.05 Intr - 101258 101012  247  2  1   98  115   242 0.999  24.01
 2.04 Intr - 131762 131660  103  1  1   91   20    76 0.009   0.36
 2.03 Intr - 133262 133204   59  2  2   86   96    25 0.010  -0.14
 2.02 Intr - 139206 139126   81  0  0  127   59    32 0.294   3.12
 2.01 Init - 143794 143789    6  1  0   72  131     9 0.702   4.03
 2.00 Prom - 145454 145415   40                              -7.15

 3.04 PlyA - 145882 145877    6                               1.05
 3.03 Term - 157930 157509  422  2  2    3   49   223 0.225   4.37
 3.02 Intr - 160732 160646   87  2  0   64   82    53 0.253   1.32
 3.01 Init - 166676 166559  118  2  1   35   69   157 0.932   8.91
 3.00 Prom - 175422 175383   40                              -4.35

 4.00 Prom + 183966 184005   40                              -2.85
 4.01 Sngl + 187010 187315  306  1  0   49   43   238 0.992  11.02
 4.02 PlyA + 187392 187397    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  37336  37167  170  2  2   99   44   148 0.986   8.56
S.002 Term +  68808  68877   70  0  1   78   47   129 0.874   4.23
S.003 Term + 119555 119695  141  1  0    1   47   234 0.870   7.55
S.004 Term + 132107 132379  273  1  0   37   51   231 0.838   8.79
S.005 Term + 147889 148020  132  0  0  131   49    70 0.800   4.51
S.006 Term - 174127 173927  201  1  0   61   38   138 0.835   2.51


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:93310042_93511301|GENSCAN_predicted_peptide_1|539_aa
QSGLKKTSGLKKLPTLVLAIGNTVYKCTLLQLVLENLGTDASPQGNIRVGDQVKSQSYLQ
DLPYILALFSTCGRFQSLRSEPAPGDLYPESGRKANRRKPTAEAIALRMIRGNRPSLTFA
HWKSQSQVSLGHFRPFVLLFQTAQNAKIKSRILSFGGMLEVDFISGAQTPLRSRVKSFKF
LKSSSAIIAFDGDWILLSGSSLNPVCLRNLHSVSIPSPRVWGGTLSGMRVLGITIGKVEK
DYSPTLEQRPVPPASERPPAPGLTGLAAPPAPTSAPGRSCARLALAPTPRRGGGGRAPTA
AAGAAAAAAGARLYDEVQAQPDADLRPRGLQEAGGVPVLPERAGGRDETKGARPAPVSPS
GHSRRRLVPGKVPGRNRVITLQRFENVVYIRSASQAGSIQLWFTLQVLLVSSSRYPDQWI
VPGGGMEPEEEPGGAAVREVYEEQNQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFK
VEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR

>gi568815586r:93310042_93511301|GENSCAN_predicted_CDS_1|1620_bp
caaagtggcctcaagaagacctctggcctcaagaagctccccactcttgtactggcaatt
ggcaatacagtgtacaaatgtacactgcttcaactggtcctagaaaacctgggaaccgat
gcatccccacaaggaaatattagagttggggaccaggtgaaatcacagtcataccttcag
gaccttccatatatacttgccttattcagcacgtgtggcagattccagagcctgcggtct
gaaccagcccctggtgacctttaccccgagagcggaagaaaggcaaacaggcggaagccc
acagccgaggccatcgcgctgcgcatgatccgtggcaaccgtccttccttgacctttgcc
cactggaaaagccaatcccaagtcagcctggggcacttccggccatttgttttactcttt
caaacagctcaaaatgccaaaattaaatcaagaattttatcatttggaggcatgcttgaa
gtagattttatttctggtgcccaaacccctctcaggtccagagtaaaaagcttcaaattc
ctgaagagttcctctgccatcattgcctttgatggtgactggattctgctatctggaagc
tctctgaacccagtgtgtttacggaatcttcatagtgttagcattccttcccccagggta
tggggcggaaccctctctggaatgagggtcttaggaatcacaatcggaaaggtggagaaa
gattacagtcctaccttggagcagcgtcccgtcccgcccgcgtcggagcggccgccggcc
ccgggactgaccggcctcgccgcacctcccgcaccgactagcgctcccgggcgctcctgc
gcccgactcgccctcgcccccactccccggcggggtggcggcggccgggcccccacggcg
gcggccggagcagcagcagcagcagcaggagcccgcctctatgatgaagttcaagcccaa
ccagacgcggacctacgaccgcgagggcttcaagaagcgggcggcgtgcctgtgcttccg
gagcgagcaggaggacgagatgagacaaagggggctcgcccagccccagtttctccatct
gggcactcgagaaggcgcctggtccccgggaaggtcccgggccgcaatagagttataacc
ttgcagaggtttgagaatgttgtttatatacgaagtgcttctcaggctggaagtatacag
ttatggttcaccttacaggtgctgctggtgagtagcagccggtacccagaccagtggatt
gtcccaggaggaggaatggaacccgaggaggaacctggcggtgctgccgtgagggaagtt
tatgaggagcagaaccaagaccgaaagcacagaacatatgtttatgttctaacagtcact
gaaatattagaagattgggaagattctgttaatattggaaggaagagagagtggttcaaa
gtagaagatgctatcaaagttctccagtgtcataaacctgtacatgcagagtatctggaa
aagctaaagctgggttgttccccagccaatggaaattctacagtcccttcccttccggat
aataatgccttgtttgtaaccgctgcacagacctctgggttgccatctagtgtaagatag

>gi568815586r:93310042_93511301|GENSCAN_predicted_peptide_2|229_aa
MPIASDIIEKHGRNQSDLRQTGDGEGGRKLNAISQAISYAWHTLPYKVSWAGSAASRLLR
PAARSGRPEAARRGVGRGGEGSRETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPF
EGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLS
IQALLSAPNPDDPLANDVAEQWKTNEAQAIETDGFAEYANAVNEKTILG

>gi568815586r:93310042_93511301|GENSCAN_predicted_CDS_2|690_bp
atgccgatagcaagtgacataatagagaaacatgggagaaatcaatcagacttgagacag
acaggtgatggtgaaggaggaagaaagctcaatgccatttcacaggccatttcctatgct
tggcatactcttccctacaaggtcagctgggcaggcagcgcggcctctcgcctccttcgg
cccgcggcccgctctgggaggcccgaggcggcgcggagaggggttggccgcggcggcgag
ggaagtcgggaaacccagcgtttgctggcagaaccagttcctggcatcaaagccgaacca
gatgagagcaacgcccgttattttcatgtggtcattgctggccctcaggattcccccttt
gagggagggacttttaaacttgaactattccttccagaagaatacccaatggcagcccct
aaagtacgtttcatgaccaaaatttatcatcctaatgtagacaagttgggaagaatatgt
ttagatattttgaaagataagtggtccccagcactgcagatccgcacagttctgctatcg
atccaggccttgttaagtgctcccaatccagatgatccattagcaaatgatgtagcggag
cagtggaagaccaacgaagcccaagccatagaaacagatggatttgctgaatatgctaat
gctgtgaatgagaaaacaattttggggtag

>gi568815586r:93310042_93511301|GENSCAN_predicted_peptide_3|208_aa
MVNIGKDGPHRKATKQIVQVQESLFSGDDVQGALKNEKITTQMQLEAIILSELMQKQPNT
TCSNLQVGAQRKARPAGSQIIHPRKIISEIKSLSPEFNPKTKATEPLRVRGLRNRLPRAP
ELFDLKESLEPQAASPPHGRPPGNKGGAIRNAQPHAGSSAGRTKAGDAGNLALPGTTGGR
PLQLPTNTVGLPSFEEVLDRRSRGKRLP

>gi568815586r:93310042_93511301|GENSCAN_predicted_CDS_3|627_bp
atggtaaacattggcaaagatgggccacacagaaaggctaccaaacaaattgtgcaggtt
caagaaagccttttcagtggagatgatgtccaaggtgctctgaagaatgagaaaataaca
acacagatgcagctggaggccattatcctaagtgaattaatgcaaaaacagccaaatact
acatgttctaacttacaagtaggagcccagagaaaagcacgccctgctgggagtcagatt
attcaccccaggaagatcatttcagagatcaagtccctcagcccggaattcaaccccaaa
acaaaagctacagagcctctgagggtcagaggtttgaggaacaggctaccaagagcacca
gaactcttcgacctaaaggagtccctagagccacaagctgcatcacctccccacgggcgt
ccgccagggaacaaagggggcgctataagaaacgcgcagccacatgccggctcttctgca
ggaaggacaaaggctggggatgcaggcaacctcgccctgccgggaacgacaggcgggaga
cctctacaactgccgaccaacactgtgggactgcccagtttcgaggaagtcctcgacagg
aggagtagagggaagcggttaccttga

>gi568815586r:93310042_93511301|GENSCAN_predicted_peptide_4|101_aa
MNSETESVIKKQQPKSSGPDRSTAEFYQMCKEPVPILLILFPQQQQQKIEEEGLLPNSFY
KNGIILIPKSDRDITEKQNYGPVSLINMDAKILNKIRANQI

>gi568815586r:93310042_93511301|GENSCAN_predicted_CDS_4|306_bp
atgaattctgaaactgaatcagtaataaaaaaacaacaaccaaaaagctctggaccagac
agatccacagctgaattctaccagatgtgcaaagagccagtaccaatcctactgatacta
ttcccccaacaacaacaacaaaaaatcgaggaggaaggactcctccccaactcattctac
aaaaacggcatcatcctgatacccaaatctgacagagacataacagaaaaacaaaactat
gggccagtatccctgataaacatggatgctaaaatcctcaacaaaatacgagcaaaccaa
atctag