GENSCAN 1.0	Date run:  4-Nov-116	Time: 09:35:53

Sequence gi568815585f:21040610_21247339 : 206730 bp : 43.87% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -   5417   5076  342  2  0   68   94   320 0.935  27.84
 1.00 Prom -  10604  10565   40                              -6.16

 2.00 Prom +  13122  13161   40                              -3.26
 2.01 Init +  20210  20643  434  1  2   87   48   247 0.745  14.29
 2.02 Term +  20743  20983  241  1  1   87   46   151 0.496   6.30
 2.03 PlyA +  22861  22866    6                               1.05

 3.05 PlyA -  23297  23292    6                               1.05
 3.04 Term -  30507  30389  119  1  2   89   55     7 0.038  -3.80
 3.03 Intr -  31249  31204   46  1  1   63   92    83 0.052   4.18
 3.02 Intr -  35849  35778   72  2  0  126   95   -21 0.022   2.00
 3.01 Init -  54105  53842  264  0  0  111   69   345 0.456  31.91
 3.00 Prom -  54291  54252   40                              -2.06

 4.04 PlyA -  55043  55038    6                               1.05
 4.03 Term -  62693  62388  306  2  0   89   32   368 0.295  26.42
 4.02 Intr -  80011  79843  169  0  1   49   66   111 0.266   4.95
 4.01 Init -  86947  86928   20  1  2   74  105     2 0.195   0.15
 4.00 Prom -  87990  87951   40                              -3.76

 5.00 Prom +  89268  89307   40                              -2.26
 5.01 Init + 100001 100072   72  1  0   90   67   108 0.659   9.97
 5.02 Intr + 100277 100386  110  1  2  132   73   170 0.608  18.98
 5.03 Intr + 135785 135897  113  2  2  100   24   115 0.260   6.32
 5.04 Term + 136303 136616  314  2  2   99   36   427 0.381  33.76
 5.05 PlyA + 136883 136888    6                               1.05

 6.00 Prom + 143914 143953   40                              -3.26
 6.01 Init + 178382 178491  110  1  2   46   91   108 0.701   6.59
 6.02 Intr + 179830 179915   86  1  2   49   36    70 0.149  -2.64
 6.03 Intr + 185370 185419   50  1  2   87  101    23 0.198   1.90
 6.04 Intr + 185774 185880  107  1  2   36   98    81 0.430   2.91
 6.05 Term + 191419 191875  457  1  1   59   37   215 0.435   8.10
 6.06 PlyA + 192768 192773    6                               1.05

 7.00 Prom + 195579 195618   40                              -0.76
 7.01 Init + 205724 205880  157  1  1   80   55    99 0.035   5.87

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 106577 106733  157  2  1   91   32   138 0.996   5.91


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:21040610_21247339|GENSCAN_predicted_peptide_1|114_aa
MRPKTFPATTYSGNSRQRLQEIREGLKQPSKSSVQGLPAGPNSDTSLDAKVLGSKDATRQ
QQQMRATPKFGPYQKALREIRYSLLPFANESGTSAAAEVNRQMLQELVNAGCDQ

>gi568815585f:21040610_21247339|GENSCAN_predicted_CDS_1|342_bp
atgaggccaaagacttttcctgccacgacttattctggaaatagccggcagcgactgcaa
gagattcgtgaggggttaaaacagccatccaagtcttcggttcaggggctacccgcagga
ccaaacagtgacacttccctggatgccaaagtcctggggagcaaagatgccaccaggcag
cagcagcagatgagagccaccccaaagttcggaccttatcagaaagccttgagggaaatc
agatattccttgttgccttttgctaatgaatcgggcacctctgcagctgcagaagtgaac
cggcaaatgctgcaggaactggtgaacgcaggatgcgaccag

>gi568815585f:21040610_21247339|GENSCAN_predicted_peptide_2|224_aa
MAPDPWDRCAAGPGVPRLSGAPGRASSEKPIPRRQRKQRRARRYGLSGLGHRPRPAPPLP
RRDPGRPGRRTTKRRSPAAPARRRPPTSPAPLEPAPRAPYGLDYEPPGGGGSGRARTVGA
GRRAPSGQTSSAAPPGALPGASAPQGAVYTLGGVLAGGSRASRAGRPGTGGWSCCWPRRD
GGAPGGGGGVDGDCSIFPGRSRRGSKAQTQVGHSLHCWHSTGVT

>gi568815585f:21040610_21247339|GENSCAN_predicted_CDS_2|675_bp
atggccccggatccgtgggaccgctgcgccgccggaccgggggtcccgaggctgtcaggg
gcgcccggccgggcgtctagtgaaaagccgatcccccggagacagcggaagcagaggcgc
gcccggcgctacggcctttcgggtctaggacaccgcccccggcccgcgccgcccctgccc
cgccgggatcccggccgccccggtcgccgcacaacaaagcggcgcagccccgctgccccc
gcccgacgccggcctccaacttccccggctcctctggaaccggctccgcgggctccgtac
ggcctggactacgagccgccgggcgggggcggctccgggcgggcgcggaccgtgggggca
gggcgcagggctccgtccggacaaacttcctcggccgccccgccgggcgcccttcccgga
gcctcggcaccacagggcgcggtctacaccctcgggggcgtcctggccggcggctcccgg
gcctctcgcgccgggagaccgggcactggtggctggagctgctgctggccccgcagggac
gggggagccccgggcggcggcggtggcgtggacggcgactgctccatcttcccggggcgc
tcacgccgcggttccaaagcgcagacccaagtgggacattcgctacattgttggcattcc
acgggcgtcacgtga

>gi568815585f:21040610_21247339|GENSCAN_predicted_peptide_3|166_aa
MAKEGIAAGGVMDINTALQEVLKTTLIHDGLARGIHEAAKPLDKGQAHLYVLASNCDETV
YVKLVEAICAKHQINFIKVDDNKKVGEWPQPPPLRPCTVRRLQPPRALPPEDVCNHNHIY
SSPFAKSGESPYHNLIMVFIIKPIYQAGKDNSFGFYLSALVDKAKY

>gi568815585f:21040610_21247339|GENSCAN_predicted_CDS_3|501_bp
atggccaaggaaggcattgctgctggaggtgtaatggacattaatactgctttacaagag
gtgctgaagaccaccctcatccacgatggcctagcacgtggaattcacgaagctgccaaa
cccttagacaagggccaagcccatctttatgtgcttgcatccaactgtgatgagactgtg
tatgtcaagttggtggaagccatttgtgctaaacaccaaatcaacttcattaaggttgat
gacaacaagaaagtaggggaatggcctcagccaccgcccctccgcccctgcactgtgcga
cgactgcagcctccacgtgcccttcctcctgaagatgtttgtaaccacaaccacatctac
agctccccctttgccaagtcaggtgaatcaccttatcataatctcatcatggttttcatt
atcaaacccatttatcaagcaggcaaagataactcattcggtttttatttatcagctctg
gttgataaagcaaaatactga

>gi568815585f:21040610_21247339|GENSCAN_predicted_peptide_4|164_aa
MGLAGRSAGIAGVSQSVRPSLTYKEFLEIEKINPNEKWATDTVYRTRNANGPGINERMLN
LSHVQQYCITMTAKDCSIMIALSPCLQDARSDQRPVIPSSRPRVAFSMSVVDLDLKPYES
IPYQYKLDGKIINYYSKTVRAKDNTMMSTRFKESEDCTLVLHKI

>gi568815585f:21040610_21247339|GENSCAN_predicted_CDS_4|495_bp
atggggcttgcaggcagaagtgctgggattgcaggtgtgagccaatctgtccggccctct
ctgacttataaggagttcttagaaatagaaaagattaatccaaatgaaaaatgggcaacg
gacacagtttatagaacaagaaatgcaaatggccctggaatcaatgaacggatgctcaac
ctctctcatgtgcagcagtactgcatcaccatgactgccaaggactgctccatcatgatt
gcactctctccgtgtctgcaggatgccagatctgatcaaaggcctgtcatcccttcatca
aggcccagggttgctttctccatgtctgtggtggaccttgacctcaagccctacgagagc
attccctatcagtataaactggatggcaagatcatcaactactattcaaagactgtacgt
gccaaagacaataccatgatgtcgactcggttcaaggaaagtgaagattgcacattagtt
ctccacaagatctaa

>gi568815585f:21040610_21247339|GENSCAN_predicted_peptide_5|202_aa
MAVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYT
CARCSRAVSQSSVLARDRSFPQKLRIGSMLSTAGKDSRRTMFLTALLWRGRIPGRQWIGK
HRRPRFVSLRAKQNMIRRLEIEAENHYWLSMPYMTREQERGHAAVRRREAFEAIKAAATS
KFPPHRFIADQLDHLNVTKKWS

>gi568815585f:21040610_21247339|GENSCAN_predicted_CDS_5|609_bp
atggcggtggagtcgcgcgttacccaggaggaaattaagaaggagccagagaaaccgatc
gaccgcgagaagacatgcccactgttgctacgggtcttcaccaccaataacggccgccac
caccgaatggacgagttctcccggggaaatgtaccgtccagcgagttgcagatctacact
tgcgctcgctgcagccgggccgtctcgcagtccagcgtgctggccagagaccgcagcttc
ccgcagaagctccggatagggtccatgctgagcacagcggggaaggactccaggcgcacc
atgttcctgactgcgctcctctggcgcggccgcattcccggccgtcagtggatcgggaag
caccggcggccgcggttcgtgtcgttgcgcgccaagcagaacatgatccgccgcctggag
atcgaggcggagaaccattactggctgagcatgccctacatgacccgggagcaggagcgc
ggccacgccgcggtgcgcaggagggaggccttcgaggccataaaggcggccgccacttcc
aagttccccccgcatagattcattgcggaccagctcgaccatctcaatgtcaccaagaaa
tggtcctaa

>gi568815585f:21040610_21247339|GENSCAN_predicted_peptide_6|269_aa
MLYKIIFEWATIYKINYKLSDELNDATEPELGTTLSCGSSENKEVVEKLSAKMPPTLVSQ
EIFKEESLSDGMITMATVKVLQSYVCHMRNRNRLHFRVAEEMESEQQVHSRGNGGCKSKY
GNKMMISNRSLIKECRKSTYGIEVSENKQVLTGSVLIMPLLKQKQNILVHQGALEKAELL
LLRLYHSSADCDMETTGAPSTDGKIVISQTASKSHKALSKCCSECFIEQHLANLKAGDVT
IGLIEGGVAECISQSKHKEQQHGKLKRGQ

>gi568815585f:21040610_21247339|GENSCAN_predicted_CDS_6|810_bp
atgctttacaagattatttttgaatgggctacaatatataaaatcaactacaagctttca
gatgagctgaatgatgctacagaacctgaacttggaactaccttgtcttgtggctcgtct
gaaaataaagaagttgttgaaaagctctcagcaaaaatgccaccaacacttgtatcacag
gaaatcttcaaagaggaaagcttatcagatggaatgatcacaatggcgacggtgaaagtt
ctacagtcctacgtgtgtcacatgagaaacaggaaccgcctacatttccgagttgccgag
gagatggaaagtgaacagcaggtgcacagtaggggtaacggtggctgtaaaagcaaatat
ggcaacaagatgatgatatccaacaggtctctaataaaggaatgcaggaaaagcacatac
ggaatagaagtgagtgagaacaagcaagtgcttacaggttctgtgctgatcatgcctctg
ctaaaacaaaaacaaaacattttggttcatcaaggtgcgctggagaaagctgagctgctg
ctgctcagactctatcacagctccgctgactgtgacatggaaacaacaggagccccatct
acagatggaaagatcgtaatttctcagaccgcatcaaagtctcacaaagccttgtctaaa
tgctgttctgagtgtttcattgagcaacatttggcaaatctcaaggctggagatgtaaca
ataggattaatagaaggaggagttgctgaatgcatttctcagtccaaacacaaggagcaa
caacacggaaagttaaaacgtggccagtga

>gi568815585f:21040610_21247339|GENSCAN_predicted_peptide_7|53_aa
MGMDLNECSDPQPVSSQTVNTSVLDDTKEQLVAVTSVTVEHCAGAKGLSTGLX

>gi568815585f:21040610_21247339|GENSCAN_predicted_CDS_7|159_bp
atggggatggatctgaatgaatgttcagatccccagcctgtctcttctcaaacagtgaac
acctctgtgctagatgacaccaaggaacagctggtagctgtgacctcagtaactgtggag
cactgtgctggagccaaagggctctcaaccgggctggnn