Result of FASTA (ccds) for pF1KB8104
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8104, 461 aa
  1>>>pF1KB8104 461 - 461 aa - 461 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.1832+/-0.000789; mu= 6.8213+/- 0.048
 mean_var=190.4206+/-38.172, 0's: 0 Z-trim(115.0): 4  B-trim: 101 in 1/52
 Lambda= 0.092943
 statistics sampled from 15602 (15605) to 15602 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.479), width:  16
 Scan time:  2.180

The best scores are:                                      opt bits E(32554)
CCDS10076.1 ITPKA gene_id:3706|Hs108|chr15         ( 461) 3126 431.1 1.2e-120
CCDS1555.1 ITPKB gene_id:3707|Hs108|chr1           ( 946) 1448 206.4 1.1e-52
CCDS12563.1 ITPKC gene_id:80271|Hs108|chr19        ( 683) 1291 185.2 1.8e-46


>>CCDS10076.1 ITPKA gene_id:3706|Hs108|chr15              (461 aa)
 initn: 3126 init1: 3126 opt: 3126  Z-score: 2279.8  bits: 431.1 E(32554): 1.2e-120
Smith-Waterman score: 3126; 100.0% identity (100.0% similar) in 461 aa overlap (1-461:1-461)

               10        20        30        40        50        60
pF1KB8 MTLPGGPTGMARPGGARPCSPGLERAPRRSVGELRLLFEARCAAVAAAAAAGEPRARGAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MTLPGGPTGMARPGGARPCSPGLERAPRRSVGELRLLFEARCAAVAAAAAAGEPRARGAK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 RRGGQVPNGLPRAPPAPVIPQLTVTAEEPDVPPTSPGPPERERDCLPAAGSSHLQQPRRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RRGGQVPNGLPRAPPAPVIPQLTVTAEEPDVPPTSPGPPERERDCLPAAGSSHLQQPRRL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 STSSVSSTGSSSLLEDSEDDLLSDSESRSRGNVQLEAGEDVGQKNHWQKIRTMVNLPVIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 STSSVSSTGSSSLLEDSEDDLLSDSESRSRGNVQLEAGEDVGQKNHWQKIRTMVNLPVIS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 PFKKRYAWVQLAGHTGSFKAAGTSGLILKRCSEPERYCLARLMADALRGCVPAFHGVVER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PFKKRYAWVQLAGHTGSFKAAGTSGLILKRCSEPERYCLARLMADALRGCVPAFHGVVER
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 DGESYLQLQDLLDGFDGPCVLDCKMGVRTYLEEELTKARERPKLRKDMYKKMLAVDPEAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DGESYLQLQDLLDGFDGPCVLDCKMGVRTYLEEELTKARERPKLRKDMYKKMLAVDPEAP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 TEEEHAQRAVTKPRYMQWREGISSSTTLGFRIEGIKKADGSCSTDFKTTRSREQVLRVFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TEEEHAQRAVTKPRYMQWREGISSSTTLGFRIEGIKKADGSCSTDFKTTRSREQVLRVFE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 EFVQGDEEVLRRYLNRLQQIRDTLEVSEFFRRHEVIGSSLLFVHDHCHRAGVWLIDFGKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EFVQGDEEVLRRYLNRLQQIRDTLEVSEFFRRHEVIGSSLLFVHDHCHRAGVWLIDFGKT
              370       380       390       400       410       420

              430       440       450       460 
pF1KB8 TPLPDGQILDHRRPWEEGNREDGYLLGLDNLIGILASLAER
       :::::::::::::::::::::::::::::::::::::::::
CCDS10 TPLPDGQILDHRRPWEEGNREDGYLLGLDNLIGILASLAER
              430       440       450       460 

>>CCDS1555.1 ITPKB gene_id:3707|Hs108|chr1                (946 aa)
 initn: 1400 init1: 1189 opt: 1448  Z-score: 1059.5  bits: 206.4 E(32554): 1.1e-52
Smith-Waterman score: 1448; 57.2% identity (76.5% similar) in 400 aa overlap (67-460:545-941)

         40        50        60        70        80        90      
pF1KB8 LFEARCAAVAAAAAAGEPRARGAKRRGGQVPNGLPRAPPAPVIPQLTVTAEEPDVPPTSP
                                     :. ::. :  : . .    .. : :  :. 
CCDS15 KAGLAWTRGTGVQSEGTWESQRQDSDALPSPELLPQDPDKPFLRKACSPSNIPAVIITDM
          520       530       540       550       560       570    

        100       110        120       130       140       150     
pF1KB8 GPPERERDCLPAAGSSHLQQP-RRLSTSSVSSTGSSSLLEDSEDDLLSDSESRSRGNVQL
       :  : .     . :: . . : :.::.::.:::: ::  ::::.:. :: :     :  .
CCDS15 GTQE-DGALEETQGSPRGNLPLRKLSSSSASSTGFSSSYEDSEEDISSDPERTLDPNSAF
           580       590       600       610       620       630   

         160           170        180       190       200       210
pF1KB8 EAGEDVGQK----NHWQKIRTMVNL-PVISPFKKRYAWVQLAGHTGSFKAAGTSGLILKR
           :  ::    . :.::..::.  : .  :::.: :.:::::.::::::. .: :::.
CCDS15 LHTLD-QQKPRVSKSWRKIKNMVHWSPFVMSFKKKYPWIQLAGHAGSFKAAA-NGRILKK
            640       650       660       670       680        690 

              220       230       240       250       260       270
pF1KB8 CSEPERYCLARLMADALRGCVPAFHGVVERDGESYLQLQDLLDGFDGPCVLDCKMGVRTY
         : :. :: :::.:.::  :::.:: : .::: : :..:::  ::.:::.:::::.:::
CCDS15 HCESEQRCLDRLMVDVLRPFVPAYHGDVVKDGERYNQMDDLLADFDSPCVMDCKMGIRTY
             700       710       720       730       740       750 

              280       290       300       310       320       330
pF1KB8 LEEELTKARERPKLRKDMYKKMLAVDPEAPTEEEHAQRAVTKPRYMQWREGISSSTTLGF
       :::::::::..:.::::::.::. ::::::::::.::::::::::::::: :::..::::
CCDS15 LEEELTKARKKPSLRKDMYQKMIEVDPEAPTEEEKAQRAVTKPRYMQWRETISSTATLGF
             760       770       780       790       800       810 

              340       350       360       370       380       390
pF1KB8 RIEGIKKADGSCSTDFKTTRSREQVLRVFEEFVQGDEEVLRRYLNRLQQIRDTLEVSEFF
       ::::::: ::. . ::: :..:::: ..:.::..:....:  : .::. :: ::::: ::
CCDS15 RIEGIKKEDGTVNRDFKKTKTREQVTEAFREFTKGNHNILIAYRDRLKAIRTTLEVSPFF
             820       830       840       850       860       870 

              400       410       420       430       440       450
pF1KB8 RRHEVIGSSLLFVHDHCHRAGVWLIDFGKTTPLPDGQILDHRRPWEEGNREDGYLLGLDN
       . ::::::::::.::. ..: ::.::::::::::.:: :.:  ::.::::::::: ::.:
CCDS15 KCHEVIGSSLLFIHDKKEQAKVWMIDFGKTTPLPEGQTLQHDVPWQEGNREDGYLSGLNN
             880       890       900       910       920       930 

              460     
pF1KB8 LIGILASLAER    
       :. ::. ...     
CCDS15 LVDILTEMSQDAPLA
             940      

>>CCDS12563.1 ITPKC gene_id:80271|Hs108|chr19             (683 aa)
 initn: 1253 init1: 1145 opt: 1291  Z-score: 947.6  bits: 185.2 E(32554): 1.8e-46
Smith-Waterman score: 1311; 53.1% identity (75.4% similar) in 390 aa overlap (73-460:322-682)

             50        60        70        80        90        100 
pF1KB8 AAVAAAAAAGEPRARGAKRRGGQVPNGLPRAPPAPVIPQLTVTAEEPDVPPTSP-GPPER
                                     .:  :: :.: .: : :. : ..: ::: :
CCDS12 DCLLGEPEDGPLEEPEPGELLTHLYSHLKCSPLCPV-PRLIITPETPE-PEAQPVGPPSR
             300       310       320        330        340         

             110       120       130       140       150       160 
pF1KB8 ERDCLPAAGSSHLQQPRRLSTSSVSSTGSSSLLEDSEDDLLSDSESRSRGNVQLEAGEDV
        .     .::. .        ::.::      ...::::... . . :         :: 
CCDS12 VE-----GGSGGF--------SSASS------FDESEDDVVAGGGGASD-------PEDR
     350                    360             370              380   

             170        180       190       200       210       220
pF1KB8 GQKNHWQKIRTMVNL-PVISPFKKRYAWVQLAGHTGSFKAAGTSGLILKRCSEPERYCLA
       . .. :.:..:...  : .  :.:.: ::::.::.:.:.: : .: ::::  . :.  : 
CCDS12 SGSKPWKKLKTVLKYSPFVVSFRKHYPWVQLSGHAGNFQA-GEDGRILKRFCQCEQRSLE
           390       400       410       420        430       440  

              230       240       250       260       270       280
pF1KB8 RLMADALRGCVPAFHGVVERDGESYLQLQDLLDGFDGPCVLDCKMGVRTYLEEELTKARE
       .:: : ::  :::..:.: .::... :..:::  :.:: ..::::: ::::::::.::::
CCDS12 QLMKDPLRPFVPAYYGMVLQDGQTFNQMEDLLADFEGPSIMDCKMGSRTYLEEELVKARE
            450       460       470       480       490       500  

              290       300       310       320       330       340
pF1KB8 RPKLRKDMYKKMLAVDPEAPTEEEHAQRAVTKPRYMQWREGISSSTTLGFRIEGIKKADG
       ::. :::::.::.:::: ::: ::::: :::::::::::: .::..::::::::::::::
CCDS12 RPRPRKDMYEKMVAVDPGAPTPEEHAQGAVTKPRYMQWRETMSSTSTLGFRIEGIKKADG
            510       520       530       540       550       560  

              350       360       370       380       390       400
pF1KB8 SCSTDFKTTRSREQVLRVFEEFVQGDEEVLRRYLNRLQQIRDTLEVSEFFRRHEVIGSSL
       .:.:.:: :.. ::: .:.:.::.::. .:..:.  :...:..::.: ::. :::.::::
CCDS12 TCNTNFKKTQALEQVTKVLEDFVDGDHVILQKYVACLEELREALEISPFFKTHEVVGSSL
            570       580       590       600       610       620  

              410       420       430       440       450       460
pF1KB8 LFVHDHCHRAGVWLIDFGKTTPLPDGQILDHRRPWEEGNREDGYLLGLDNLIGILASLAE
       ::::::   : ::.::::::. ::: : :.:: :: ::::::::: ::::.: .: .::.
CCDS12 LFVHDHTGLAKVWMIDFGKTVALPDHQTLSHRLPWAEGNREDGYLWGLDNMICLLQGLAQ
            630       640       650       660       670       680  

        
pF1KB8 R
        
CCDS12 S
        




461 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 09:30:08 2016 done: Fri Nov  4 09:30:09 2016
 Total Scan time:  2.180 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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