Result of FASTA (omim) for pF1KB7744
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7744, 487 aa
  1>>>pF1KB7744 487 - 487 aa - 487 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.7807+/-0.000379; mu= -3.9733+/- 0.024
 mean_var=551.7663+/-130.350, 0's: 0 Z-trim(125.2): 560  B-trim: 2515 in 1/57
 Lambda= 0.054601
 statistics sampled from 47152 (48454) to 47152 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.835), E-opt: 0.2 (0.568), width:  16
 Scan time:  9.890

The best scores are:                                      opt bits E(85289)
XP_016882078 (OMIM: 605859) PREDICTED: zinc finger ( 487) 3450 286.3 1.3e-76
NP_055198 (OMIM: 605859) zinc finger and BTB domai ( 487) 3450 286.3 1.3e-76
XP_011525020 (OMIM: 605859) PREDICTED: zinc finger ( 487) 3450 286.3 1.3e-76
XP_016882077 (OMIM: 605859) PREDICTED: zinc finger ( 523) 2218 189.3 2.2e-47
XP_016882079 (OMIM: 605859) PREDICTED: zinc finger ( 311) 2054 176.1 1.3e-43
NP_001303831 (OMIM: 605859) zinc finger and BTB do ( 210) 1524 134.1 3.7e-31
XP_016882080 (OMIM: 605859) PREDICTED: zinc finger ( 246) 1254 112.9   1e-24
XP_016882081 (OMIM: 605859) PREDICTED: zinc finger ( 191) 1244 112.0 1.5e-24
NP_001303832 (OMIM: 605859) zinc finger and BTB do ( 155) 1145 104.1   3e-22
NP_005997 (OMIM: 176797,612447) zinc finger and BT ( 673)  531 56.6 2.6e-07
XP_016873746 (OMIM: 176797,612447) PREDICTED: zinc ( 673)  531 56.6 2.6e-07
NP_001018011 (OMIM: 176797,612447) zinc finger and ( 673)  531 56.6 2.6e-07
XP_016873748 (OMIM: 176797,612447) PREDICTED: zinc ( 673)  531 56.6 2.6e-07
XP_016873747 (OMIM: 176797,612447) PREDICTED: zinc ( 673)  531 56.6 2.6e-07
NP_862827 (OMIM: 608992) B-cell CLL/lymphoma 6 mem ( 480)  355 42.5  0.0032


>>XP_016882078 (OMIM: 605859) PREDICTED: zinc finger and  (487 aa)
 initn: 3450 init1: 3450 opt: 3450  Z-score: 1496.4  bits: 286.3 E(85289): 1.3e-76
Smith-Waterman score: 3450; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)

               10        20        30        40        50        60
pF1KB7 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 APKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 HPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB7 RTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPC
              430       440       450       460       470       480

              
pF1KB7 CPSSSTT
       :::::::
XP_016 CPSSSTT
              

>>NP_055198 (OMIM: 605859) zinc finger and BTB domain-co  (487 aa)
 initn: 3450 init1: 3450 opt: 3450  Z-score: 1496.4  bits: 286.3 E(85289): 1.3e-76
Smith-Waterman score: 3450; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)

               10        20        30        40        50        60
pF1KB7 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 APKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 APKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 HPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 HPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB7 RTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 RTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPC
              430       440       450       460       470       480

              
pF1KB7 CPSSSTT
       :::::::
NP_055 CPSSSTT
              

>>XP_011525020 (OMIM: 605859) PREDICTED: zinc finger and  (487 aa)
 initn: 3450 init1: 3450 opt: 3450  Z-score: 1496.4  bits: 286.3 E(85289): 1.3e-76
Smith-Waterman score: 3450; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)

               10        20        30        40        50        60
pF1KB7 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 APKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 HPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB7 RTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPC
              430       440       450       460       470       480

              
pF1KB7 CPSSSTT
       :::::::
XP_011 CPSSSTT
              

>>XP_016882077 (OMIM: 605859) PREDICTED: zinc finger and  (523 aa)
 initn: 2256 init1: 2214 opt: 2218  Z-score: 971.6  bits: 189.3 E(85289): 2.2e-47
Smith-Waterman score: 3348; 93.1% identity (93.1% similar) in 519 aa overlap (1-483:1-519)

               10        20        30        40        50        60
pF1KB7 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
              250       260       270       280       290       300

              310                                           320    
pF1KB7 APKGLWSQNQLASSSPTPG------------------------------------SLPQG
       :::::::::::::::::::                                    :::::
XP_016 APKGLWSQNQLASSSPTPGKPLAVLHTPVTWCLLWAGARGVQPEQGPYLPLFLPGSLPQG
              310       320       330       340       350       360

          330       340       350       360       370       380    
pF1KB7 PAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRPHPPPAPPARSRPYACSVCGKRFSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRPHPPPAPPARSRPYACSVCGKRFSL
              370       380       390       400       410       420

          390       400       410       420       430       440    
pF1KB7 KHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHLRTHGAAPYRCSLCGAGCPSLASMQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHLRTHGAAPYRCSLCGAGCPSLASMQ
              430       440       450       460       470       480

          450       460       470       480       
pF1KB7 AHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPCCPSSSTT
       :::::::::::::::::::::::::::::::::::::::    
XP_016 AHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPCCPSSSTT
              490       500       510       520   

>>XP_016882079 (OMIM: 605859) PREDICTED: zinc finger and  (311 aa)
 initn: 2105 init1: 2054 opt: 2054  Z-score: 904.2  bits: 176.1 E(85289): 1.3e-43
Smith-Waterman score: 2054; 99.7% identity (100.0% similar) in 296 aa overlap (1-296:1-296)

               10        20        30        40        50        60
pF1KB7 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TQEAQQEQTRSKEKRLQAPVGQRGADGKHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::.:    
XP_016 TSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRFPPPGP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 APKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRP
                                                                   
XP_016 RTAQPWGDGRV                                                 
              310                                                  

>>NP_001303831 (OMIM: 605859) zinc finger and BTB domain  (210 aa)
 initn: 1524 init1: 1524 opt: 1524  Z-score: 680.4  bits: 134.1 E(85289): 3.7e-31
Smith-Waterman score: 1524; 100.0% identity (100.0% similar) in 209 aa overlap (279-487:2-210)

      250       260       270       280       290       300        
pF1KB7 WAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLNAPKGLWSQ
                                     ::::::::::::::::::::::::::::::
NP_001                              MSTPTTGAWQEVWREQRIPLSLNAPKGLWSQ
                                            10        20        30 

      310       320       330       340       350       360        
pF1KB7 NQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRPHPPPAPPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRPHPPPAPPA
              40        50        60        70        80        90 

      370       380       390       400       410       420        
pF1KB7 RSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHLRTHGAAPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHLRTHGAAPY
             100       110       120       130       140       150 

      430       440       450       460       470       480       
pF1KB7 RCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPCCPSSSTT
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPCCPSSSTT
             160       170       180       190       200       210

>>XP_016882080 (OMIM: 605859) PREDICTED: zinc finger and  (246 aa)
 initn: 1254 init1: 1254 opt: 1254  Z-score: 564.7  bits: 112.9 E(85289): 1e-24
Smith-Waterman score: 1442; 85.3% identity (85.3% similar) in 245 aa overlap (279-487:2-246)

      250       260       270       280       290       300        
pF1KB7 WAEAPWLVGGQPALWSILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLNAPKGLWSQ
                                     ::::::::::::::::::::::::::::::
XP_016                              MSTPTTGAWQEVWREQRIPLSLNAPKGLWSQ
                                            10        20        30 

      310                                           320       330  
pF1KB7 NQLASSSPTPG------------------------------------SLPQGPAQLSPGE
       :::::::::::                                    :::::::::::::
XP_016 NQLASSSPTPGKPLAVLHTPVTWCLLWAGARGVQPEQGPYLPLFLPGSLPQGPAQLSPGE
              40        50        60        70        80        90 

            340       350       360       370       380       390  
pF1KB7 MEESDQGHTGALATCAGHEDKAGCPPRPHPPPAPPARSRPYACSVCGKRFSLKHQMETHY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEESDQGHTGALATCAGHEDKAGCPPRPHPPPAPPARSRPYACSVCGKRFSLKHQMETHY
             100       110       120       130       140       150 

            400       410       420       430       440       450  
pF1KB7 RVHTGEKPFSCSLCPQRSRDFSAMTKHLRTHGAAPYRCSLCGAGCPSLASMQAHMRGHSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVHTGEKPFSCSLCPQRSRDFSAMTKHLRTHGAAPYRCSLCGAGCPSLASMQAHMRGHSP
             160       170       180       190       200       210 

            460       470       480       
pF1KB7 SQLPPGWTIRSTFLYSSSRPSRPSTSPCCPSSSTT
       :::::::::::::::::::::::::::::::::::
XP_016 SQLPPGWTIRSTFLYSSSRPSRPSTSPCCPSSSTT
             220       230       240      

>>XP_016882081 (OMIM: 605859) PREDICTED: zinc finger and  (191 aa)
 initn: 1244 init1: 1244 opt: 1244  Z-score: 561.6  bits: 112.0 E(85289): 1.5e-24
Smith-Waterman score: 1244; 100.0% identity (100.0% similar) in 169 aa overlap (319-487:23-191)

      290       300       310       320       330       340        
pF1KB7 VWREQRIPLSLNAPKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCA
                                     ::::::::::::::::::::::::::::::
XP_016         MAFPSTIAPPPLEPGRRSGGNRGSLPQGPAQLSPGEMEESDQGHTGALATCA
                       10        20        30        40        50  

      350       360       370       380       390       400        
pF1KB7 GHEDKAGCPPRPHPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GHEDKAGCPPRPHPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQ
             60        70        80        90       100       110  

      410       420       430       440       450       460        
pF1KB7 RSRDFSAMTKHLRTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSRDFSAMTKHLRTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYS
            120       130       140       150       160       170  

      470       480       
pF1KB7 SSRPSRPSTSPCCPSSSTT
       :::::::::::::::::::
XP_016 SSRPSRPSTSPCCPSSSTT
            180       190 

>>NP_001303832 (OMIM: 605859) zinc finger and BTB domain  (155 aa)
 initn: 1145 init1: 1145 opt: 1145  Z-score: 520.4  bits: 104.1 E(85289): 3e-22
Smith-Waterman score: 1145; 100.0% identity (100.0% similar) in 155 aa overlap (333-487:1-155)

            310       320       330       340       350       360  
pF1KB7 KGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRPHP
                                     ::::::::::::::::::::::::::::::
NP_001                               MEESDQGHTGALATCAGHEDKAGCPPRPHP
                                             10        20        30

            370       380       390       400       410       420  
pF1KB7 PPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHLRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHLRT
               40        50        60        70        80        90

            430       440       450       460       470       480  
pF1KB7 HGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPCCP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPCCP
              100       110       120       130       140       150

            
pF1KB7 SSSTT
       :::::
NP_001 SSSTT
            

>>NP_005997 (OMIM: 176797,612447) zinc finger and BTB do  (673 aa)
 initn: 716 init1: 325 opt: 531  Z-score: 252.3  bits: 56.6 E(85289): 2.6e-07
Smith-Waterman score: 531; 68.4% identity (86.7% similar) in 98 aa overlap (371-467:572-669)

              350       360       370       380       390       400
pF1KB7 TGALATCAGHEDKAGCPPRPHPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKP
                                     .:: :. :::.::::::.::::::::::::
NP_005 GDHPYECEFCGSCFRDESTLKSHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKP
             550       560       570       580       590       600 

              410       420        430       440       450         
pF1KB7 FSCSLCPQRSRDFSAMTKHLRTH-GAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGW
       : :.:: :::::.::: :::::: ::.::.:..:   ::::.::: ::.::.: ..:: :
NP_005 FECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICTEYCPSLSSMQKHMKGHKPEEIPPDW
             610       620       630       640       650       660 

     460       470       480       
pF1KB7 TIRSTFLYSSSRPSRPSTSPCCPSSSTT
        :..:.::                    
NP_005 RIEKTYLYLCYV                
             670                   




487 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 09:21:06 2016 done: Fri Nov  4 09:21:07 2016
 Total Scan time:  9.890 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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