Result of FASTA (omim) for pF1KB7654
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7654, 371 aa
  1>>>pF1KB7654 371 - 371 aa - 371 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.2824+/-0.000328; mu= 14.2784+/- 0.021
 mean_var=136.6932+/-27.325, 0's: 0 Z-trim(119.5): 93  B-trim: 397 in 1/54
 Lambda= 0.109699
 statistics sampled from 33580 (33686) to 33580 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.754), E-opt: 0.2 (0.395), width:  16
 Scan time: 10.150

The best scores are:                                      opt bits E(85289)
NP_006359 (OMIM: 606443) cyclic AMP-responsive ele ( 371) 2453 399.3 7.3e-111
XP_016855861 (OMIM: 607138) PREDICTED: cyclic AMP- ( 375)  519 93.2   1e-18
NP_001242910 (OMIM: 607138) cyclic AMP-responsive  ( 375)  519 93.2   1e-18
XP_006711235 (OMIM: 607138) PREDICTED: cyclic AMP- ( 375)  519 93.2   1e-18
NP_001242909 (OMIM: 607138) cyclic AMP-responsive  ( 375)  519 93.2   1e-18
NP_570968 (OMIM: 607138) cyclic AMP-responsive ele ( 395)  519 93.3   1e-18
NP_001242907 (OMIM: 607138) cyclic AMP-responsive  ( 395)  519 93.3   1e-18
NP_001242908 (OMIM: 607138) cyclic AMP-responsive  ( 395)  519 93.3   1e-18
NP_001258925 (OMIM: 611998) cyclic AMP-responsive  ( 459)  508 91.6 3.9e-18
NP_001258924 (OMIM: 611998) cyclic AMP-responsive  ( 460)  508 91.6 3.9e-18
NP_115996 (OMIM: 611998) cyclic AMP-responsive ele ( 461)  508 91.6 3.9e-18
NP_443086 (OMIM: 616215) cyclic AMP-responsive ele ( 519)  387 72.5 2.5e-12
XP_016868030 (OMIM: 608834) PREDICTED: cyclic AMP- ( 457)  378 71.0   6e-12
XP_005250598 (OMIM: 608834) PREDICTED: cyclic AMP- ( 457)  378 71.0   6e-12
NP_001305175 (OMIM: 608834) cyclic AMP-responsive  ( 457)  378 71.0   6e-12
XP_016868029 (OMIM: 608834) PREDICTED: cyclic AMP- ( 457)  378 71.0   6e-12
NP_919047 (OMIM: 608834) cyclic AMP-responsive ele ( 520)  378 71.1 6.6e-12
XP_006718443 (OMIM: 616215) PREDICTED: cyclic AMP- ( 363)  311 60.3   8e-09


>>NP_006359 (OMIM: 606443) cyclic AMP-responsive element  (371 aa)
 initn: 2453 init1: 2453 opt: 2453  Z-score: 2111.3  bits: 399.3 E(85289): 7.3e-111
Smith-Waterman score: 2453; 100.0% identity (100.0% similar) in 371 aa overlap (1-371:1-371)

               10        20        30        40        50        60
pF1KB7 MELELDAGDQDLLAFLLEESGDLGTAPDEAVRAPLDWALPLSEVPSDWEVDDLLCSLLSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MELELDAGDQDLLAFLLEESGDLGTAPDEAVRAPLDWALPLSEVPSDWEVDDLLCSLLSP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 PASLNILSSSNPCLVHHDHTYSLPRETVSMDLESESCRKEGTQMTPQHMEELAEQEIARL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PASLNILSSSNPCLVHHDHTYSLPRETVSMDLESESCRKEGTQMTPQHMEELAEQEIARL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 VLTDEEKSLLEKEGLILPETLPLTKTEEQILKRVRRKIRNKRSAQESRRKKKVYVGGLES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VLTDEEKSLLEKEGLILPETLPLTKTEEQILKRVRRKIRNKRSAQESRRKKKVYVGGLES
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 RVLKYTAQNMELQNKVQLLEEQNLSLLDQLRKLQAMVIEISNKTSSSSTCILVLLVSFCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RVLKYTAQNMELQNKVQLLEEQNLSLLDQLRKLQAMVIEISNKTSSSSTCILVLLVSFCL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 LLVPAMYSSDTRGSLPAEHGVLSRQLRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LLVPAMYSSDTRGSLPAEHGVLSRQLRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDC
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 VLQAPGNTSCLLHYMPQAPSAEPPLEWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VLQAPGNTSCLLHYMPQAPSAEPPLEWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGS
              310       320       330       340       350       360

              370 
pF1KB7 PSVILQDRYSG
       :::::::::::
NP_006 PSVILQDRYSG
              370 

>>XP_016855861 (OMIM: 607138) PREDICTED: cyclic AMP-resp  (375 aa)
 initn: 534 init1: 488 opt: 519  Z-score: 457.1  bits: 93.2 E(85289): 1e-18
Smith-Waterman score: 519; 46.6% identity (72.1% similar) in 204 aa overlap (120-319:167-360)

      90       100       110       120       130       140         
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
                                     : :::::: :: .::. ::  :::::.::.
XP_016 ELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAEER
        140       150       160       170       180       190      

     150       160       170       180       190       200         
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
       .::.::::::::.:::.:::.:: :. ::::::   .:::.:::.::: ::..:.::. :
XP_016 VLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQ
        200       210       220       230       240       250      

     210       220       230       240       250           260     
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAE----HGVLSRQ
       ::.::... . :::....:::.:.:: :. :...:..   ..:    .:    ::: ::.
XP_016 LRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHGVTSRN
        260       270       280       290       300       310      

         270       280       290       300       310       320     
pF1KB7 LRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPPL
       .  :  .:  .     :...: ..  ..   ..:    : :.:  ::. :   :      
XP_016 I--LTHKDVTE----NLETQVVESRLREPPGAKD----ANGSTRTLLEKMGGKPRPSGRI
          320           330       340           350       360      

         330       340       350       360       370 
pF1KB7 EWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
                                                     
XP_016 RSVLHADEM                                     
        370                                          

>>NP_001242910 (OMIM: 607138) cyclic AMP-responsive elem  (375 aa)
 initn: 534 init1: 488 opt: 519  Z-score: 457.1  bits: 93.2 E(85289): 1e-18
Smith-Waterman score: 519; 46.6% identity (72.1% similar) in 204 aa overlap (120-319:167-360)

      90       100       110       120       130       140         
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
                                     : :::::: :: .::. ::  :::::.::.
NP_001 ELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAEER
        140       150       160       170       180       190      

     150       160       170       180       190       200         
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
       .::.::::::::.:::.:::.:: :. ::::::   .:::.:::.::: ::..:.::. :
NP_001 VLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQ
        200       210       220       230       240       250      

     210       220       230       240       250           260     
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAE----HGVLSRQ
       ::.::... . :::....:::.:.:: :. :...:..   ..:    .:    ::: ::.
NP_001 LRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHGVTSRN
        260       270       280       290       300       310      

         270       280       290       300       310       320     
pF1KB7 LRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPPL
       .  :  .:  .     :...: ..  ..   ..:    : :.:  ::. :   :      
NP_001 I--LTHKDVTE----NLETQVVESRLREPPGAKD----ANGSTRTLLEKMGGKPRPSGRI
          320           330       340           350       360      

         330       340       350       360       370 
pF1KB7 EWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
                                                     
NP_001 RSVLHADEM                                     
        370                                          

>>XP_006711235 (OMIM: 607138) PREDICTED: cyclic AMP-resp  (375 aa)
 initn: 534 init1: 488 opt: 519  Z-score: 457.1  bits: 93.2 E(85289): 1e-18
Smith-Waterman score: 519; 46.6% identity (72.1% similar) in 204 aa overlap (120-319:167-360)

      90       100       110       120       130       140         
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
                                     : :::::: :: .::. ::  :::::.::.
XP_006 ELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAEER
        140       150       160       170       180       190      

     150       160       170       180       190       200         
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
       .::.::::::::.:::.:::.:: :. ::::::   .:::.:::.::: ::..:.::. :
XP_006 VLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQ
        200       210       220       230       240       250      

     210       220       230       240       250           260     
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAE----HGVLSRQ
       ::.::... . :::....:::.:.:: :. :...:..   ..:    .:    ::: ::.
XP_006 LRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHGVTSRN
        260       270       280       290       300       310      

         270       280       290       300       310       320     
pF1KB7 LRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPPL
       .  :  .:  .     :...: ..  ..   ..:    : :.:  ::. :   :      
XP_006 I--LTHKDVTE----NLETQVVESRLREPPGAKD----ANGSTRTLLEKMGGKPRPSGRI
          320           330       340           350       360      

         330       340       350       360       370 
pF1KB7 EWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
                                                     
XP_006 RSVLHADEM                                     
        370                                          

>>NP_001242909 (OMIM: 607138) cyclic AMP-responsive elem  (375 aa)
 initn: 534 init1: 488 opt: 519  Z-score: 457.1  bits: 93.2 E(85289): 1e-18
Smith-Waterman score: 519; 46.6% identity (72.1% similar) in 204 aa overlap (120-319:167-360)

      90       100       110       120       130       140         
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
                                     : :::::: :: .::. ::  :::::.::.
NP_001 ELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAEER
        140       150       160       170       180       190      

     150       160       170       180       190       200         
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
       .::.::::::::.:::.:::.:: :. ::::::   .:::.:::.::: ::..:.::. :
NP_001 VLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQ
        200       210       220       230       240       250      

     210       220       230       240       250           260     
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAE----HGVLSRQ
       ::.::... . :::....:::.:.:: :. :...:..   ..:    .:    ::: ::.
NP_001 LRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHGVTSRN
        260       270       280       290       300       310      

         270       280       290       300       310       320     
pF1KB7 LRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPPL
       .  :  .:  .     :...: ..  ..   ..:    : :.:  ::. :   :      
NP_001 I--LTHKDVTE----NLETQVVESRLREPPGAKD----ANGSTRTLLEKMGGKPRPSGRI
          320           330       340           350       360      

         330       340       350       360       370 
pF1KB7 EWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
                                                     
NP_001 RSVLHADEM                                     
        370                                          

>>NP_570968 (OMIM: 607138) cyclic AMP-responsive element  (395 aa)
 initn: 534 init1: 488 opt: 519  Z-score: 456.8  bits: 93.3 E(85289): 1e-18
Smith-Waterman score: 519; 46.6% identity (72.1% similar) in 204 aa overlap (120-319:187-380)

      90       100       110       120       130       140         
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
                                     : :::::: :: .::. ::  :::::.::.
NP_570 ELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAEER
        160       170       180       190       200       210      

     150       160       170       180       190       200         
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
       .::.::::::::.:::.:::.:: :. ::::::   .:::.:::.::: ::..:.::. :
NP_570 VLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQ
        220       230       240       250       260       270      

     210       220       230       240       250           260     
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAE----HGVLSRQ
       ::.::... . :::....:::.:.:: :. :...:..   ..:    .:    ::: ::.
NP_570 LRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHGVTSRN
        280       290       300       310       320       330      

         270       280       290       300       310       320     
pF1KB7 LRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPPL
       .  :  .:  .     :...: ..  ..   ..:    : :.:  ::. :   :      
NP_570 I--LTHKDVTE----NLETQVVESRLREPPGAKD----ANGSTRTLLEKMGGKPRPSGRI
          340           350       360           370       380      

         330       340       350       360       370 
pF1KB7 EWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
                                                     
NP_570 RSVLHADEM                                     
        390                                          

>>NP_001242907 (OMIM: 607138) cyclic AMP-responsive elem  (395 aa)
 initn: 534 init1: 488 opt: 519  Z-score: 456.8  bits: 93.3 E(85289): 1e-18
Smith-Waterman score: 519; 46.6% identity (72.1% similar) in 204 aa overlap (120-319:187-380)

      90       100       110       120       130       140         
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
                                     : :::::: :: .::. ::  :::::.::.
NP_001 ELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAEER
        160       170       180       190       200       210      

     150       160       170       180       190       200         
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
       .::.::::::::.:::.:::.:: :. ::::::   .:::.:::.::: ::..:.::. :
NP_001 VLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQ
        220       230       240       250       260       270      

     210       220       230       240       250           260     
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAE----HGVLSRQ
       ::.::... . :::....:::.:.:: :. :...:..   ..:    .:    ::: ::.
NP_001 LRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHGVTSRN
        280       290       300       310       320       330      

         270       280       290       300       310       320     
pF1KB7 LRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPPL
       .  :  .:  .     :...: ..  ..   ..:    : :.:  ::. :   :      
NP_001 I--LTHKDVTE----NLETQVVESRLREPPGAKD----ANGSTRTLLEKMGGKPRPSGRI
          340           350       360           370       380      

         330       340       350       360       370 
pF1KB7 EWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
                                                     
NP_001 RSVLHADEM                                     
        390                                          

>>NP_001242908 (OMIM: 607138) cyclic AMP-responsive elem  (395 aa)
 initn: 534 init1: 488 opt: 519  Z-score: 456.8  bits: 93.3 E(85289): 1e-18
Smith-Waterman score: 519; 46.6% identity (72.1% similar) in 204 aa overlap (120-319:187-380)

      90       100       110       120       130       140         
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
                                     : :::::: :: .::. ::  :::::.::.
NP_001 ELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAEER
        160       170       180       190       200       210      

     150       160       170       180       190       200         
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
       .::.::::::::.:::.:::.:: :. ::::::   .:::.:::.::: ::..:.::. :
NP_001 VLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQ
        220       230       240       250       260       270      

     210       220       230       240       250           260     
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAE----HGVLSRQ
       ::.::... . :::....:::.:.:: :. :...:..   ..:    .:    ::: ::.
NP_001 LRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHGVTSRN
        280       290       300       310       320       330      

         270       280       290       300       310       320     
pF1KB7 LRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPPL
       .  :  .:  .     :...: ..  ..   ..:    : :.:  ::. :   :      
NP_001 I--LTHKDVTE----NLETQVVESRLREPPGAKD----ANGSTRTLLEKMGGKPRPSGRI
          340           350       360           370       380      

         330       340       350       360       370 
pF1KB7 EWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
                                                     
NP_001 RSVLHADEM                                     
        390                                          

>>NP_001258925 (OMIM: 611998) cyclic AMP-responsive elem  (459 aa)
 initn: 561 init1: 503 opt: 508  Z-score: 446.6  bits: 91.6 E(85289): 3.9e-18
Smith-Waterman score: 508; 47.3% identity (74.7% similar) in 186 aa overlap (120-298:211-396)

      90       100       110       120       130       140         
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
                                     ::::..::.:: :::. ::  ::::: ::.
NP_001 KDLLLSGSSGDLHHLGASYLLRPGAGHCQELVLTEDEKKLLAKEGITLPTQLPLTKYEER
              190       200       210       220       230       240

     150       160       170       180       190       200         
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
       .::..:::::::.::::::.::: :. :::.:.   ::::.::: ::  ::.::::::.:
NP_001 VLKKIRRKIRNKQSAQESRKKKKEYIDGLETRMSACTAQNQELQRKVLHLEKQNLSLLEQ
              250       260       270       280       290       300

     210       220       230       240        250       260        
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYS-SDTRGSLPAEHG---VLSRQ
       :.::::.:.. ..:.....::. :::.:: :...:..   . ..   :.. .   :.:: 
NP_001 LKKLQAIVVQSTSKSAQTGTCVAVLLLSFALIILPSISPFGPNKTESPGDFAPVRVFSRT
              310       320       330       340       350       360

         270       280          290       300       310       320  
pF1KB7 LRALPSEDPYQLELPALQSEVPK---DSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAE
       :.   .       .:. ..  :.   :.:..   ::                        
NP_001 LHNDAASRVAADAVPGSEAPGPRPEADTTREESPGSPGADWGFQDTANLTNSTEELDNAT
              370       380       390       400       410       420

            330       340       350       360       370 
pF1KB7 PPLEWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
                                                        
NP_001 LVLRNATEGLGQVALLDWVAPGPSTGSGRAGLEAAGDEL          
              430       440       450                   

>>NP_001258924 (OMIM: 611998) cyclic AMP-responsive elem  (460 aa)
 initn: 561 init1: 503 opt: 508  Z-score: 446.6  bits: 91.6 E(85289): 3.9e-18
Smith-Waterman score: 508; 47.3% identity (74.7% similar) in 186 aa overlap (120-298:212-397)

      90       100       110       120       130       140         
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
                                     ::::..::.:: :::. ::  ::::: ::.
NP_001 LLLSGSSGDLQQHHLGASYLLRPGAGHCQELVLTEDEKKLLAKEGITLPTQLPLTKYEER
             190       200       210       220       230       240 

     150       160       170       180       190       200         
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
       .::..:::::::.::::::.::: :. :::.:.   ::::.::: ::  ::.::::::.:
NP_001 VLKKIRRKIRNKQSAQESRKKKKEYIDGLETRMSACTAQNQELQRKVLHLEKQNLSLLEQ
             250       260       270       280       290       300 

     210       220       230       240        250       260        
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYS-SDTRGSLPAEHG---VLSRQ
       :.::::.:.. ..:.....::. :::.:: :...:..   . ..   :.. .   :.:: 
NP_001 LKKLQAIVVQSTSKSAQTGTCVAVLLLSFALIILPSISPFGPNKTESPGDFAPVRVFSRT
             310       320       330       340       350       360 

         270       280          290       300       310       320  
pF1KB7 LRALPSEDPYQLELPALQSEVPK---DSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAE
       :.   .       .:. ..  :.   :.:..   ::                        
NP_001 LHNDAASRVAADAVPGSEAPGPRPEADTTREESPGSPGADWGFQDTANLTNSTEELDNAT
             370       380       390       400       410       420 

            330       340       350       360       370 
pF1KB7 PPLEWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
                                                        
NP_001 LVLRNATEGLGQVALLDWVAPGPSTGSGRAGLEAAGDEL          
             430       440       450       460          




371 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 09:07:35 2016 done: Fri Nov  4 09:07:36 2016
 Total Scan time: 10.150 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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