GENSCAN 1.0	Date run:  4-Nov-116	Time: 09:04:44

Sequence gi568815587f:17619783_17821505 : 201723 bp : 48.02% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   9351   9534  184  2  1   50   77   207 0.840  15.16
 1.02 Intr +  11920  12140  221  2  2   80   25   193 0.937  10.22
 1.03 Intr +  12306  12444  139  2  1   48   78   231 0.997  18.14
 1.04 Intr +  13898  14092  195  0  0   69   78   133 0.982   9.79
 1.05 Intr +  14287  14499  213  2  0  106   89   172 0.997  17.79
 1.06 Intr +  15298  15405  108  2  0   48   64   139 0.937   7.76
 1.07 Intr +  15828  15929  102  1  0   99   89    67 0.989   8.05
 1.08 Term +  18669  18832  164  1  2  140   55   140 0.612  14.00
 1.09 PlyA +  19278  19283    6                               1.05

 2.02 PlyA -  19771  19766    6                              -1.95
 2.01 Sngl -  20325  19870  456  0  0   74   38   564 0.999  46.19
 2.00 Prom -  20630  20591   40                              -8.56

 3.00 Prom +  20738  20777   40                             -13.43
 3.01 Init +  20993  21038   46  1  1   38   89    74 0.840   3.34
 3.02 Intr +  21131  21309  179  0  2   60   54   261 0.840  19.54
 3.03 Intr +  22065  22169  105  2  0   63   99   122 0.998  11.21
 3.04 Intr +  22345  22464  120  0  0  103   86    64 0.901   8.39
 3.05 Intr +  23679  23724   46  2  1  105   76   -32 0.611  -4.72
 3.06 Intr +  25782  25861   80  1  2  117   38   190 0.653  16.17
 3.07 Term +  25962  26162  201  2  0   98   54   266 0.973  21.59
 3.08 PlyA +  27479  27484    6                               1.05

 4.07 PlyA -  28198  28193    6                               1.05
 4.06 Term -  60630  60443  188  1  2   88   32    92 0.726   1.25
 4.05 Intr -  69117  68965  153  1  0  110   38    68 0.123   4.04
 4.04 Intr -  80079  79933  147  1  0   79   68    82 0.699   5.51
 4.03 Intr -  84220  84144   77  0  2   72   90   112 0.387   8.96
 4.02 Intr -  88641  88544   98  0  2   94   11    26 0.143  -5.69
 4.01 Init -  88790  88680  111  2  0  109  106    14 0.665   5.52
 4.00 Prom -  92318  92279   40                              -5.86

 5.00 Prom +  94756  94795   40                              -6.56
 5.01 Init + 100001 100630  630  1  0   56   91  1283 0.347 120.75
 5.02 Intr + 101120 101198   79  1  1  117   64   163 0.990  15.92
 5.03 Intr + 101473 101717  245  2  2   63   47   215 0.671  12.12
 5.04 Term + 102295 102585  291  0  0   53   40   187 0.211   5.74
 5.05 PlyA + 104412 104417    6                               1.05

 6.00 Prom + 107540 107579   40                              -5.76
 6.01 Init + 116221 116790  570  0  0  104  114  1613 0.988 160.59
 6.02 Intr + 151883 152816  934  1  1  125   91  1711 0.996 165.87
 6.03 Intr + 159674 159862  189  0  0   44   75   180 0.285  11.86
 6.04 Term + 165432 165442   11  1  2  125   49    -4 0.167  -2.24
 6.05 PlyA + 166958 166963    6                               1.05

 7.04 PlyA - 168290 168285    6                               1.05
 7.03 Term - 168631 168303  329  2  2  100   44   207 0.713  12.37
 7.02 Intr - 172667 172583   85  2  1   75   55    30 0.012  -2.21
 7.01 Intr - 189350 189263   88  1  1  139   71    23 0.034   5.67

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:17619783_17821505|GENSCAN_predicted_peptide_1|441_aa
VTVDLQPVWPPVSRYGFRIEDTGHMYMILTPSDIQIQWLHSSGLMIVEASKTSKAQGHGL
CGICDGDAANDLTLKDGSVVGGAEDPAPFLDSWQVPSSLTSVGQTRFRPDSCATTDCSPC
LRMVSNRTFSACHRFVPPESFCELWIRDTKYVQQPCVALTVYVAMCHKFHVCIEWRRSDY
CPFLCSSDSTYQACVTACEPPKTCQDGILGPLDPEHCQVLGEGCVCSEGTILHRRHSALC
IPEAKCACTDSMGVPRALGETWNSSLSGCCQHQCQAPDTIVPVDLGCPSPRPESCLRFGE
VALLLPTKDPCCLGTVCECDPDLCEAELVPSCRQDQILITGRLGDSCCTSYFCACGDCPD
SIPECQEGEALTVHRNTTELCCPLYQCVCENFRCPQVQCGLGTALVEVWSPDRCCPYKSC
GESVVRTASPLGDPVALLRRD

>gi568815587f:17619783_17821505|GENSCAN_predicted_CDS_1|1326_bp
gtgactgtggacttgcagcctgtgtggccaccggtgagcaggtatggattcagaattgag
gacacaggccacatgtacatgatcctgactccctcagacatccagatccagtggctccac
agctcaggactcatgatcgtggaggccagcaaaaccagcaaggcccagggccatggcctg
tgcggtatctgtgatggagatgcagccaatgaccttaccctgaaggatggctcagtggtg
ggtggggctgaggaccctgctccctttctggacagctggcaggtgcccagctccctgacc
tcagtgggccagacccgcttccgcccagacagctgcgccacaactgactgctcgccctgc
cttcgcatggtgtccaaccgcaccttcagtgcctgccaccgctttgtgcctccggagtca
ttctgtgagctgtggatccgggacaccaagtacgtgcagcagccctgcgtggccctgact
gtgtacgtggccatgtgccacaaatttcatgtgtgcatcgagtggcggcgctctgactac
tgccccttcctgtgctccagcgactccacataccaggcatgtgtgacagcctgtgagcca
cccaagacatgccaggatgggatactagggcctctggacccagagcactgccaggtgctg
ggcgagggctgcgtctgctccgagggcaccatcttacaccggcgccactctgcactctgc
atcccggaggccaagtgcgcctgcactgacagcatgggggtgccgagggccctgggggag
acctggaacagctccctcagcggctgctgccagcaccagtgccaagccccagacaccatt
gtcccggtggatctgggctgccccagtccccgccctgagagctgcctgcgattcggggag
gtggccttgctcctacccaccaaggacccctgctgcctggggactgtctgtgagtgtgac
ccagatctctgtgaggcagagctggtccccagctgccgacaggaccagatcctgatcacg
ggccgcctgggggactcctgctgcacctcctacttctgcgcctgtggtgactgtccagac
tccatccccgaatgtcaagaaggggaggcgctcactgtgcacaggaataccacggaactc
tgctgccctctgtaccagtgtgtgtgtgagaacttccgctgtccccaagtgcagtgtggc
ctgggcactgccctggtggaggtgtggagccccgaccgctgctgcccctacaaatcctgt
ggtgagtccgtggtcaggacagcctccccgctgggagatccagtggccctgctgaggagg
gattga

>gi568815587f:17619783_17821505|GENSCAN_predicted_peptide_2|151_aa
MIVINIIIIIAIIIFTTTIILTFPTTTIVIALSPPSPSSLHYHHHPHCPHHHHHCIITIT
TTTILTITTTIILTITTTITIALSPSPPPSSSPSPPPPSLHYYHNHCTITIVTTTILLTV
PTIITTISIIIIIFMIIFIFIVLNPYHNSKA

>gi568815587f:17619783_17821505|GENSCAN_predicted_CDS_2|456_bp
atgattgtcatcaacatcatcatcatcattgccattatcatcttcaccaccaccatcatc
ctcaccttccccactaccaccattgtcattgcattatcaccaccatcaccatcgtcactg
cattatcaccatcaccctcactgtccccaccaccaccatcattgcattatcaccatcacc
accaccaccatcctcaccatcaccaccaccatcatcctcaccatcaccaccaccatcacc
attgcattatcaccatcaccaccaccatcatcctcaccatccccaccaccaccatcattg
cattattaccataatcactgcactatcaccatcgtcaccaccaccatcctcctcactgtc
cccaccatcatcactaccatcagcatcatcattatcatcttcatgataattttcatcttc
attgtacttaatccttaccacaactctaaagcatga

>gi568815587f:17619783_17821505|GENSCAN_predicted_peptide_3|258_aa
MHSVENVCGCAKYECVKAPVCLSRELGVMQPGQTVVELSADGVCHTSRCTTVLDPLTNFY
QINTTSVLCDIHCEANQEYEHPRDLAACCGSCRNVSCLFTFPNGTTSLFLPGASWIADCA
RHHCSSTPLGAVLVRSPISCPPLNETECAKVGGSVVPSLEGCCRTCKEDGRSCKKVTIRM
TIRKNECRSSTPVNLVSCDGRCPSASIYNYNINTYARFCKCCREVGLQRRSVQLFCATNA
TWVPYTVQEPTDCACQWS

>gi568815587f:17619783_17821505|GENSCAN_predicted_CDS_3|777_bp
atgcacagcgtggagaatgtgtgtggctgcgccaagtacgagtgtgtgaaggccccggtg
tgtctgagccgcgagctgggtgtgatgcagcccggccagacagtggtggagctctcagca
gatggcgtgtgccacacctcccgctgcaccaccgtgctcgaccctctcaccaacttctac
cagatcaacaccacctccgtgctctgtgacatccactgtgaggcgaaccaggagtacgag
cacccgcgggacctcgctgcctgctgcggctcctgcaggaacgtgtcctgtctcttcacc
ttccccaatggcaccacctccctgttcttgcccggggcatcctggatcgcagactgcgcc
cgccaccactgcagcagcacgcccctgggtgccgtgctggtccgctctcccataagctgc
ccaccgctcaatgagactgagtgtgccaaggttgggggttccgtggtaccttccttggaa
ggatgctgcaggacctgtaaggaggatgggcgctcctgcaagaaggtgaccatccgcatg
accatccgcaagaatgaatgcaggagcagcacccctgtgaacctagtgtcctgcgatggg
aggtgcccatccgccagcatctacaactacaacatcaacacctatgcccgattctgcaag
tgctgccgtgaggtgggcctgcagcggcgctctgtgcagctcttctgtgccaccaatgcc
acctgggtgccctatacagtgcaggagcccaccgactgtgcctgccagtggtcctga

>gi568815587f:17619783_17821505|GENSCAN_predicted_peptide_4|257_aa
METGPPVLGLCSSCVSTGLRSLIHLDSNAVSARYLPWLSNVTGSSTYGGCKGSVVKVYTV
LASCLSQGAQTCENITLQGKKDFADVDGKIILDSRGVSEKQDSRKEDKAPNLRTQLEKPE
KAPEQLTLGATYWRQPPPPPHWLCCDVSEKQGSIPTLPFFLGHTCGCYASVIWPSFYLFL
HFQFVDSSESDRKALGEQKPYGLDRRSSSMPLCYGAPPFLVSASIAFKGKKEEGVSGEYL
EELKYSPKEHAFTPKQF

>gi568815587f:17619783_17821505|GENSCAN_predicted_CDS_4|774_bp
atggagactggaccaccagtgctggggctatgttcctcatgtgtctccactggacttagg
agtctaatacacctggattcaaatgctgtgtctgctcgttacttaccttggctgtcaaat
gtgactggttctagcacctacggaggatgtaagggttcagttgtcaaggtatacacagtg
cttgcatcatgcctgtctcagggtgcacaaacctgtgaaaacattacgttacaaggcaaa
aaggactttgcagatgtggatgggaagattatcctggattcccgaggggtcagtgagaag
caggactccaggaaggaagacaaggccccaaacctcaggactcagttggagaaaccagag
aaggccccagaacagctgactctgggcgccacgtattggaggcagccaccccctccccca
cactggctgtgctgtgacgtctctgaaaaacagggcagcatccccacattgcccttcttt
ctgggtcatacctgtggatgctatgccagtgttatttggccatctttctacctcttcctg
cattttcagtttgttgatagttctgagtcagatcggaaagctcttggtgagcagaagcca
tatggcttagaccgcaggtcctcctccatgccattgtgctatggagcacccccttttctt
gtcagtgcctctatagcattcaaggggaagaaagaggaaggagtgagtggggagtacctt
gaagaactgaagtactcaccaaaagagcatgcatttactccaaagcaattttaa

>gi568815587f:17619783_17821505|GENSCAN_predicted_peptide_5|414_aa
MELLSPPLRDVDLTAPDGSLCSFATTDDFYDDPCFDSPDLRFFEDLDPRLMHVGALLKPE
EHSHFPAAVHPAPGAREDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERR
RLSKVNEAFETLKRCTSSNPNQRLPKVEILRNAIRYIEGLQALLRDQDAAPPGAAAAFYA
PGPLPPGRGGEHYSGDSDASSPRSNCSDGMMDYSGPPSGARRRNCYEGAYYNEAPSEPRP
GKSAAVSSLDCLSSIVERISTESPAAPALLLADVPSESPPRRQEAAAPSEGESSGDPTQS
PDAAPQCPAGANPNPIYQAGEPRALAQVIKIKALIYTAVAPAFPGHGCGIRRKIRKLGQL
SLSDACRRQADCKEEACCLGKEGGVQISPVREEVPLTLTTLLHTSVALMEGYTG

>gi568815587f:17619783_17821505|GENSCAN_predicted_CDS_5|1245_bp
atggagctactgtcgccaccgctccgcgacgtagacctgacggcccccgacggctctctc
tgctcctttgccacaacggacgacttctatgacgacccgtgtttcgactccccggacctg
cgcttcttcgaagacctggacccgcgcctgatgcacgtgggcgcgctcctgaaacccgaa
gagcactcgcacttccccgcggcggtgcacccggccccgggcgcacgtgaggacgagcat
gtgcgcgcgcccagcgggcaccaccaggcgggccgctgcctactgtgggcctgcaaggcg
tgcaagcgcaagaccaccaacgccgaccgccgcaaggccgccaccatgcgcgagcggcgc
cgcctgagcaaagtaaatgaggcctttgagacactcaagcgctgcacgtcgagcaatcca
aaccagcggttgcccaaggtggagatcctgcgcaacgccatccgctatatcgagggcctg
caggctctgctgcgcgaccaggacgccgcgccccctggcgccgcagccgccttctatgcg
ccgggcccgctgcccccgggccgcggcggcgagcactacagcggcgactccgacgcgtcc
agcccgcgctccaactgctccgacggcatgatggactacagcggccccccgagcggcgcc
cggcggcggaactgctacgaaggcgcctactacaacgaggcgcccagcgaacccaggccc
gggaagagtgcggcggtgtcgagcctagactgcctgtccagcatcgtggagcgcatctcc
accgagagccctgcggcgcccgccctcctgctggcggacgtgccttctgagtcgcctccg
cgcaggcaagaggctgccgcccccagcgagggagagagcagcggcgaccccacccagtca
ccggacgccgccccgcagtgccctgcgggtgcgaaccccaacccgatataccaggcgggc
gagccgcgggcgctcgctcaggtgatcaaaataaaggcgctaatttataccgccgtggct
ccggctttccctggacatgggtgtgggatccggaggaaaatccgcaaactgggccagctg
tccctcagcgacgcctgtaggcggcaggcggattgcaaggaggaagcctgctgcctgggg
aaggaaggaggggtgcaaatttctccagtacgtgaggaagttcctctgaccttgactaca
ttactacacacgtccgtggctcttatggaagggtacacaggttga

>gi568815587f:17619783_17821505|GENSCAN_predicted_peptide_6|567_aa
MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRH
PGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALD
SFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALF
EDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAE
TEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSS
KAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFA
TMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALC
ALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVVNSPH
HSTQSDTCPLAQEEILEINRADSKLNGEVAKAALANEDCPHIDQALTPDEGLPFTRSGTR
ERYGPCFLLSTGEYACPPGGGMRKGGI

>gi568815587f:17619783_17821505|GENSCAN_predicted_CDS_6|1704_bp
atgggccaaggggacgagagcgagcgcatcgtgatcaacgtgggcggcacgcgccaccag
acgtaccgctcgaccctgcgcacgctgcccggcacgcggctcgcctggctggcggagccc
gacgcccacagccacttcgactatgacccgcgtgctgacgagttcttcttcgaccgccac
cccggcgtcttcgcgcacatcctgaactactaccgcacgggcaagctgcactgcccagcc
gacgtgtgcgggccgctctacgaggaggagctggccttctggggcatcgacgagaccgac
gtggagccctgctgctggatgacgtaccgccagcaccgcgacgccgaggaggctctggac
agcttcggcggcgctcctctggacaacagcgccgacgacgcggacgccgacggccctggc
gactcgggcgacggcgaggacgagctggagatgaccaagcgcctggcgctcagtgactcc
ccggatggccggcctggcggcttttggcgccgctggcagccgcgcatctgggcgctcttc
gaggacccgtactcgtcccgctacgcgcggtatgtggccttcgcttccctcttcttcatc
ctggtctccatcaccaccttctgcctggagacccacgagcgcttcaaccccatcgtgaac
aagacggagatcgagaacgttcgcaatggcacgcaagtgcgctactaccgggaggccgag
acggaggccttccttacctacatcgagggcgtctgtgtggtctggttcaccttcgagttc
ctcatgcgtgtcatcttctgccccaacaaggtagagttcatcaagaactcgctcaacatc
attgactttgtggccatcctgcccttctacctggaggtggggctgagcggcctgtcctcc
aaggcagccaaggacgtgctgggcttcctgcgcgtcgtccgcttcgtgcgcatcttgcgc
atctttaagctgacccgccactttgtgggcctgcgggtcctgggccacacgctccgagcc
agcaccaacgagttcctgctgctcatcatcttcctggccttgggcgtgctgatcttcgcc
accatgatctactacgccgagaggataggggcacagcccaatgaccccagcgccagtgag
cacacgcactttaagaacatccccatcggcttctggtgggccgtggtcaccatgacgacc
ctgggctatggagacatgtacccgcagacgtggtccggcatgctggtgggggctctgtgt
gcgctggcgggcgtgctcaccatcgccatgcccgtgcccgtcatcgtgaacaatttcggg
atgtattactccttagccatggctaagcagaaactaccaaagaaaaaaaagaagcatatt
ccgcggccaccgcagctgggatctcccaattattgtaaatctgtcgtaaactctccacac
cacagtactcagagtgacacatgtccgctggcccaggaagaaattttagaaattaacaga
gcagattccaaactgaatggggaggtggcgaaggccgcgctggcgaacgaagactgcccc
cacatagaccaggccctcactcccgatgagggcctgccctttacgcgctcgggcacccgc
gagagatacggaccctgcttcctcttatcaaccggggagtacgcgtgcccacctggtgga
ggaatgagaaagggaggaatatga

>gi568815587f:17619783_17821505|GENSCAN_predicted_peptide_7|167_aa
XKSLLIPQIIYSLLAGAMNGSFYIPYDIYQVSSAFLPPPSLLTVSWCHSPGPGTKPIPGG
VCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALCQLPAHPALVQD
PKVTYLSPDAIEDTESQKAMDKERNWKERQSETSTQSQSDWSRNGGL

>gi568815587f:17619783_17821505|GENSCAN_predicted_CDS_7|504_bp
nngaagtctcttctgatccctcagattatttattccttgctagcaggtgccatgaatggt
tcattttatatcccttatgatatctaccaagtcagctctgccttcctcccacccccatcc
ctgctgacggtcagctggtgccactcaccagggccgggcacaaagcccataccaggtgga
gtgtgttactcttggggctggaatgagcatggcatgtgcggagatggcactgaagccaac
gtctgggccccaaagccggtgcaggctctgctgtcatcgtcaggactccttgtgggctgt
ggggctggccactccttggccctctgccagctgccagctcaccctgcattggtccaggac
cccaaggtcacctacctttccccagatgccatcgaggacactgaatctcagaaagccatg
gacaaagagagaaactggaaggaaagacaatcagaaacttcaacccaaagccaatctgac
tggtccagaaatgggggactgtga