GENSCAN 1.0	Date run:  4-Nov-116	Time: 08:53:44

Sequence gi568815591r:96920739_97124623 : 203885 bp : 41.27% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1148   1257  110  2  2   64  113    65 0.865   5.61
 1.02 Term +  12610  12776  167  2  2   24   44   152 0.099   1.50
 1.03 PlyA +  15232  15237    6                               1.05

 2.00 Prom +  23496  23535   40                              -4.95
 2.01 Init +  33094  33191   98  0  2   85  106    62 0.769   7.53
 2.02 Intr +  59272  59363   92  1  2   51   92    47 0.062   0.12
 2.03 Intr +  71518  71601   84  2  0   66  115    79 0.001   7.27
 2.04 Intr +  78058  78178  121  2  1   70   54   110 0.039   4.43
 2.05 Intr +  83221  83348  128  1  2   -9   66   227 0.058  10.20
 2.06 Intr +  83413  83627  215  2  2   63   86   141 0.093   8.91
 2.07 Term +  84165  84281  117  2  0   74   34    62 0.054  -3.04
 2.08 PlyA +  84355  84360    6                               1.05

 3.00 Prom +  85043  85082   40                              -9.35
 3.01 Init +  85249  85675  427  0  1   82   94   671 0.593  63.61
 3.02 Intr +  86137  86500  364  2  1   56   16   229 0.575   5.82
 3.03 Intr +  86577  86791  215  0  2   37   76   160 0.572   7.14
 3.04 Intr +  86900  87093  194  0  2  113   91   189 0.918  19.99
 3.05 Intr +  89058  89220  163  2  1  104   10    99 0.680   2.33
 3.06 Term +  89280  89407  128  1  2   87   49   155 0.984   8.96
 3.07 PlyA +  90039  90044    6                              -0.45

 4.12 PlyA -  90555  90550    6                               1.05
 4.11 Term -  93038  92845  194  0  2   76   48   124 0.030   3.80
 4.10 Intr -  96894  96753  142  0  1   45   58    94 0.050   1.11
 4.09 Intr - 100327 100202  126  1  0  101   42   180 0.258  14.66
 4.08 Intr - 101631 101447  185  1  2   46   99   145 0.998   9.99
 4.07 Intr - 103789 103531  259  1  1   52   88   287 0.820  21.21
 4.06 Intr - 103979 103893   87  2  0  129   60   116 0.808  12.15
 4.05 Intr - 105704 105567  138  2  0   19   80   115 0.582   3.54
 4.04 Intr - 105857 105716  142  1  1   20   21   131 0.360  -0.97
 4.03 Intr - 106981 106855  127  2  1   58   28   122 0.190   2.02
 4.02 Intr - 113583 113378  206  2  2   38   34   136 0.218   1.12
 4.01 Init - 113870 113818   53  2  2   88   97    59 0.264   5.65
 4.00 Prom - 122084 122045   40                              -5.95

 5.00 Prom + 126028 126067   40                              -6.15
 5.01 Init + 130103 130243  141  1  0   87   26    84 0.841   2.28
 5.02 Intr + 130643 130823  181  1  1  104   39    96 0.918   4.82
 5.03 Term + 131092 131522  431  2  2   -8   41   313 0.892  11.48
 5.04 PlyA + 131573 131578    6                               1.05

 6.00 Prom + 136043 136082   40                              -3.65
 6.01 Init + 139441 139576  136  0  1   74   72    68 0.679   4.15
 6.02 Term + 139882 140294  413  2  2   46   49   167 0.930   3.02
 6.03 PlyA + 140667 140672    6                               1.05

 7.03 PlyA - 141459 141454    6                               1.05
 7.02 Term - 154201 153975  227  2  2  -36   39   281 0.544   6.76
 7.01 Init - 154401 154302  100  0  1   78   73    51 0.565   3.09
 7.00 Prom - 176073 176034   40                              -4.65

 8.00 Prom + 180877 180916   40                              -6.55
 8.01 Init + 180969 181186  218  2  2   74   79   104 0.205   6.31
 8.02 Intr + 194899 195005  107  1  2  120   64    64 0.770   6.14
 8.03 Intr + 196417 196619  203  2  2    6   54   139 0.325   0.38
 8.04 Term + 196920 197222  303  2  0   -8   32   350 0.801  13.99
 8.05 PlyA + 197512 197517    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  76896  76775  122  2  2   87   92    73 0.872   6.82
S.002 Intr -  78485  78320  166  0  1  107   36   101 0.866   4.90


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:96920739_97124623|GENSCAN_predicted_peptide_1|92_aa
XYTQLSPSESGITDVETYFCRAVYDDIYELCLTVISQEWEPETLKQSHTFTEQQEKGLPA
MSPYGKICPGFKAPSTALGTIKERLWQISTDT

>gi568815591r:96920739_97124623|GENSCAN_predicted_CDS_1|279_bp
nnatacacacaattgagcccttctgaatctggcatcacagacgttgagacatacttttgc
agagcagtttatgatgacatttatgagctatgcctcacagtcatctctcaagaatgggag
ccagaaacactaaaacaaagtcatactttcacagagcagcaagagaaaggacttccagcg
atgagcccctatggaaaaatctgccctggcttcaaggccccaagcacagccctgggaacc
attaaagagaggctctggcagatctcaactgacacatag

>gi568815591r:96920739_97124623|GENSCAN_predicted_peptide_2|284_aa
MRSGQGPQRISSGKGHNEGTLGNQITKLHLWVGWCKSLLTLSSNFQLNQKLDIQGRGQEC
GQPGWMRGKGEFGGIRDRRFLVEKYKSVRPAVRVSLQICTRQWLVLGGSLPPEFHYRAPG
SLQTAARGSQLRSKVGVQTERIFRSRPPNLKPLEGRAAGDLLQSRDPEPGTLDAGLNHAP
GLRCLCLAALTCVGLETGGRKARSAALGCSELNVFPQSIFEREVVLPPGCADINPLANNK
WINNNKNTLLRSEKKKKTPPPPTTFCTIYKKYGLKRQGPSQNRV

>gi568815591r:96920739_97124623|GENSCAN_predicted_CDS_2|855_bp
atgagaagtggacaaggtccacagcgtatcagctcaggtaagggccacaacgaagggact
ctgggtaaccagattacaaaattacacctctgggttggatggtgcaagagtcttctaact
ctgtcttccaacttccagttaaaccagaagctggacattcaagggaggggccaggaatgt
ggccagccaggctggatgagggggaagggggagtttgggggtattcgggacaggaggttt
ctggtggaaaaatacaaatcggttcgccctgcagtgagggtttctctacaaatctgtaca
agacagtggctggttcttggaggatctctgcctcctgaattccattatcgggcccctggt
tccctgcagacggcagctcgtgggagccagctgcgatcgaaagtcggggtccagaccgag
aggatcttcaggtctcgtccacccaatctcaagcctctggaagggcgggctgccggcgac
ctcctccagtcccgggacccggaacccgggaccctggacgccggcctgaaccacgcaccg
gggctccgctgtctctgcttggctgccttaacctgcgtgggtctggagaccggagggaga
aaggctagatccgcagccttgggctgctccgaacttaatgtctttccccagtccatcttt
gaaagagaagtggttctaccacctggatgtgcggatataaatccccttgcaaataataaa
tggattaataataacaagaacacgctgctgcgttctgaaaagaaaaaaaagacgcccccc
ccccccacaaccttttgtacaatatataagaaatacggcctgaaacggcagggaccgagc
cagaacagggtctga

>gi568815591r:96920739_97124623|GENSCAN_predicted_peptide_3|496_aa
MTTMADGLEGQDSSKSAFMEFGQQQQQQQQQQQQQQQQQQQPPPPPPPPPQPHSQQSSPA
MAGAHYPLHCLHSAAAAAAAGSHHHHHHQHHHHGSPYASGGGNSYNHRSLAAYPYMSHSQ
HSPYLQSYHNSSAAAQTRGDDTVTRREAGLAFALVKLVTVRLFPVGFKVSLTFIPDRAPY
LAFRYSVGCSFVRGGEAKNLGLMVLSTRGGQSCRERRSLLVGWSELLVVFCLRIWSSSGE
SFQNMPRMLDALSLELVTSSQLAACRLAALRTPESLRHRLRCGKAGCLSEGLWRSLGPDA
AHCSGQGLGQGDYADAGSTRAEWTKRGRGIIGIFRDQQKTTVIENGEIRFNGKGKKIRKP
RTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLLKQGS
NPHESDPLQGSAALSPRSPALPPVWDVSASAKGVRHDAETTDDVSCPREHPRETSEQGKE
DPGPACICEKEPKEQA

>gi568815591r:96920739_97124623|GENSCAN_predicted_CDS_3|1491_bp
atgactacgatggctgacggcttggaaggccaggactcgtccaaatccgccttcatggag
ttcgggcagcagcagcagcagcagcagcaacagcagcagcagcagcagcagcaacagcaa
cagccgccgccgccgccgccgccgccgccgcagccgcactcgcagcagagctccccggcc
atggcaggcgcgcactaccctctgcactgcctgcactcggcggcggcggcggcagcggcc
ggctcgcaccaccaccaccaccaccagcaccaccaccacggctcgccctacgcgtcgggc
ggagggaactcctacaaccaccgctcgctcgccgcctacccctacatgagccactcgcag
cacagcccttacctccagtcctaccacaacagcagcgcagccgcccagacgcgaggggac
gacacagtgactcggagggaagctggcctggctttcgctctggttaaactagtaacagtc
aggctctttccagtgggctttaaagtgtccctcaccttcatccctgaccgggccccctat
ctagcttttcgctacagtgttggctgctcctttgttcgtggaggggaagcaaagaacctc
gggctgatggttctcagcacccgagggggacaaagttgccgtgagaggcgcagcctgctc
gtgggctggtctgagctgttggttgtgttttgtttgaggatttggtcctcctcaggagag
tcatttcaaaacatgccgaggatgcttgatgcactgagcttggagctggtgacatcaagt
caactggccgcctgccgccttgctgcgctgcgcaccccagagagcctccggcaccgcctc
cgctgcggcaaagcgggctgtttgtctgagggcctctggcgctcccttggcccagacgct
gcacattgttcgggccagggactgggtcaaggagattacgcagacgctgggagcacacgg
gcagagtggaccaagagaggtcggggcatcatagggatttttcgagatcaacaaaaaact
acagtgattgaaaacggggaaatcaggttcaatggaaaagggaaaaagattcggaagcct
cggaccatttattccagcctgcagctccaggctttaaaccatcgctttcagcagacacag
tatctggcccttccagagagagccgaactggcagcttccttaggactgacacaaacacag
gtgaagatatggtttcagaacaaacgctctaagtttaagaaactgctgaagcagggcagt
aatcctcatgagagcgaccccctccagggctcggcggccctgtcgccacgctcgccagcg
ctgcctccagtctgggacgtttctgcctcggccaagggtgtcagacacgatgcagagacc
acagatgatgtgagttgcccaagggaacaccctagggaaacgtctgaacaaggaaaagag
gatccgggacctgcttgtatctgcgaaaaggagccaaaggagcaggcttag

>gi568815591r:96920739_97124623|GENSCAN_predicted_peptide_4|552_aa
MAGCRSRALPCGEAAKARRGSRLQPRPAQRRAPTVQQRAEGLLKRGQNGHQGRGGTESKR
WLQGLPARCHLSKQNQTTTTKTATAYSGSALLEEFDAVGLFLHGWICRWILRGNSVQPAG
LRTKLEALVLSQRSPRQPRPKARDSGQWEKENAAGRQSPGAEVSPERKCDNSCVFLTAKA
GSWCTHGSSALEFLSGAVSCSEFQTPYLYPSACFRPSGSTLQPCLLRPEQPHSQLGQLPP
PQQQGQPLPPPESPTLPESSATDSDYYSPTGGAPHGYCSPTSASYGKALNPYQYQYHGVN
GSAGSYPAKAYADYSYASSYHQYGGAYNRVPSATNQPEKEVTEPEVRMVNGKPKKVRKPR
TIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEM
PPEHSPSSSDPMACNSPQSPAWASSYSPPLTYNTSPPPSELLTNPRKAGACGQGQRDSSV
PRPPPGPSLKRVVVLLSERIRVRMGSLSIRFVFLVFYVVDVFGAACDWSLRKVPCFYKVW
RDSAGDSKLKSI

>gi568815591r:96920739_97124623|GENSCAN_predicted_CDS_4|1659_bp
atggcgggctgcaggtcccgagccctgccctgtggggaggcagctaaggcccgccgaggg
agccggctccagcctcggccagcccagagaagggctcccacggtgcagcagcgggctgaa
gggctcctcaagcgcggccagaatgggcaccaaggccgaggaggcaccgagagcaagcga
tggctgcaagggctgccagcacgctgtcacctctcaaaacaaaaccaaacaactacaact
aaaacagccacagcttattcgggaagcgcactgctggaagagtttgatgccgtggggctg
tttctccacggctggatttgtcggtggattttgagaggcaatagcgtccagcccgctggc
cttaggacaaagctggaggccctagttctatctcagagaagcccgcggcagcccaggccc
aaagctcgtgactcgggccagtgggagaaggagaatgctgctgggcgccagtctcccggt
gctgaagtttcccccgaaaggaagtgcgacaatagctgtgtttttctgaccgcaaaggca
gggagttggtgcacgcacggcagctctgctttggagttcctgagcggggctgtatcttgc
tctgagttccagacaccctacctctacccgtcggcctgttttaggccgagtggctccaca
ctccaaccatgtctgcttagaccagagcagccccacagccaactagggcagctgccgccg
ccacaacagcaaggacagccgctgccgccgcccgaatcgccaactttgcccgagtcttca
gctaccgattctgactactacagccctacggggggagccccgcacggctactgctctcct
acctcggcttcctatggcaaagctctcaacccctaccagtatcagtatcacggcgtgaac
ggctccgccgggagctacccagccaaagcttatgccgactatagctacgctagctcctac
caccagtacggcggcgcctacaaccgcgtcccaagcgccaccaaccagccagagaaagaa
gtgaccgagcccgaggtgagaatggtgaatggcaaaccaaagaaagttcgtaaacccagg
actatttattccagctttcagctggccgcattacagagaaggtttcagaagactcagtac
ctcgccttgccggaacgcgccgagctggccgcctcgctgggattgacacaaacacaggtg
aaaatctggtttcagaacaaaagatccaagatcaagaagatcatgaaaaacggggagatg
cccccggagcacagtcccagctccagcgacccaatggcgtgtaactcgccgcagtctcca
gcgtgggcgtcttcatactccccaccccttacttacaacacctcacccccaccttcagag
ctcctcacaaaccccaggaaggctggggcatgcggtcagggccagcgcgattcttcggtg
cccagaccacctcctgggccatccttaaaaagggttgttgttctgttgagtgaaaggatt
cgagtgagaatgggatccttaagtattcgatttgtctttcttgttttctatgttgttgat
gtatttggtgcagcttgtgactggagcctgcgaaaagtaccatgtttctataaggtgtgg
agagactctgctggagattccaagctaaaatctatttga

>gi568815591r:96920739_97124623|GENSCAN_predicted_peptide_5|250_aa
MRDCAMKDGAIRPRYYAFPMVFTTCRPEDSLGCLHHQSPGFQAQSWEGISERKAAALLRG
LEIKLPSPWNRAPGGRGSCGPTFSKLKRFCLLALKRAVDLLAQTASSKSNSININKKDAH
AKTPSEGHQKPKVDKSTKMRKNQHKKSENSKNQNNSSPPKDHNYSPAREQNWMENEFDKL
TEVGFRRWVITNSSPLKEHVLAQCKEAKNLYKWLQELLTRITSLDKTINDLMELKNTAQE
LCEAYTSINS

>gi568815591r:96920739_97124623|GENSCAN_predicted_CDS_5|753_bp
atgagggactgtgccatgaaggacggtgctatccggcccagatactatgcttttcccatg
gtcttcacaacctgcagaccagaagattccctcgggtgcctacaccaccagagccctgga
tttcaagcacaaagctgggagggcatctctgaaagaaaggcagcagccctactcaggggc
ttagagataaaactcccatctccctggaacagagcacctgggggaaggggcagctgtggg
cccaccttcagcaaacttaaacgtttctgcctgctagcactgaagagagcagtggatctc
ctagcacagactgcctcctcaaaaagcaatagcatcaacatcaacaaaaaggacgcccac
gcaaaaaccccatcagaaggtcatcaaaaaccaaaggtagataaatccacgaagatgagg
aaaaaccagcacaaaaagtctgaaaattccaaaaaccagaacaactcttctcctccgaag
gatcacaactactcgccggcaagggaacaaaactggatggagaatgagtttgacaaattg
acagaagtaggtttcagaaggtgggtgataacaaactcctccccgctaaaggagcatgtt
ctagcccaatgcaaggaagctaagaacctttataaatggttacaggaactgctaactaga
ataaccagtttagacaagaccataaatgacctgatggagctaaaaaacacagcacaagaa
ctttgtgaagcatatacaagtatcaatagctga

>gi568815591r:96920739_97124623|GENSCAN_predicted_peptide_6|182_aa
MTKKENFRPISLMNINVKIPSKILANRIQQHIKKLIHHDRVGFIPVLEVLARAIWQEEER
KGIQIAREGVKLSLFANHMTLYLENSIVSAPKLPKLISNFSKVSGYNINVQKSQAFLYTN
NRQVESQIMSELPFRIPIKRIKYLGIQLTRDVNDLFKENYKPLLNEIKEDTNKWKNIPCS
WI

>gi568815591r:96920739_97124623|GENSCAN_predicted_CDS_6|549_bp
atgacaaaaaaagaaaatttcaggccaatatccctaatgaacatcaatgtgaaaatcccc
agtaaaatactggcaaacagaatccagcagcatatcaaaaaacttatccaccatgatcga
gttggcttcatccctgtattggaagttctggccagggcaatctggcaagaggaagaaaga
aaaggtattcaaatagcaagagaaggagtcaaattatctctgtttgccaatcacatgacc
ctatatttagaaaactccatagtctcagccccaaaactccctaagctgataagcaacttc
agcaaagtctcaggatacaatatcaatgtgcaaaaatcacaagctttcctatacaccaac
aatagacaagtggagagccaaatcatgagtgaactcccattcagaattcctataaagaga
ataaaatacctaggaatccaacttacaagggatgtgaatgacctcttcaaggagaactac
aaaccacttctcaatgaaataaaagaggacacaaacaaatggaagaatattccatgctca
tggatatga

>gi568815591r:96920739_97124623|GENSCAN_predicted_peptide_7|108_aa
MAAGHFLDGGKPHVLSPGVLGLMDSKEWNLGPCTIQEQWQAFSLIWSGSGRLAGSEAQQT
PCRIRRDGSQQQVCDGGKQQWWTASKSSARVVKNTDQKNAVARFNRVK

>gi568815591r:96920739_97124623|GENSCAN_predicted_CDS_7|327_bp
atggcagcgggccacttcctagatggtggcaagcctcatgttctctcacctggggttctt
ggcctcatggattccaaggaatggaatcttgggccatgcaccatccaggaacaatggcaa
gcttttagcctgatctggagtggcagtgggcgcctcgctggatcagaagcacagcagaca
ccctgtcggatccggagggatggaagtcagcagcaggtctgtgacggcggcaaacagcag
tggtggacggcaagcaaaagctcagctcgagtcgtaaaaaacacggaccagaagaatgca
gttgcaagatttaatagagtgaaatag

>gi568815591r:96920739_97124623|GENSCAN_predicted_peptide_8|276_aa
MVILPKAIYKFNAIPIKIPSSFLIELEKTFLKFIWNQKRACIAKARLSKNKSGGITLPNF
KLYYKAIVTKKARKFLHRKKSGVCETITQISTFLPLLHQQEYEASDTVRRAHAQSINWEN
SAVQRAWVGELVDGEINLTLIPKAGCSNTLNASNGLGTMEGIPEEPDLNEAFLRPLFAEV
RERAVPLRRRSRRSAWGAMPGRHVSRVRALYKRVLQLHRVLPPDLKSLGDQYVKDEFRRH
KTVGSDEAQRFLQEWEASDAPFSLPKTFGVPRCPGF

>gi568815591r:96920739_97124623|GENSCAN_predicted_CDS_8|831_bp
atggtcatactgccaaaagcaatctacaaattcaatgcaattcccatcaaaataccatca
tcatttctcatcgaactagaaaaaacattcctaaaattcatatggaaccaaaaaagagcc
tgcatagccaaagcaagactaagcaagaacaaatctggaggcatcacattacccaacttc
aaactatactacaaggctatagttaccaaaaaagcaagaaagtttttgcacagaaagaag
tctggggtctgtgagacaatcacacaaatttcaacatttctgcctcttcttcaccagcag
gaatatgaggcatctgacaccgttagaagagcccatgcccagagtataaattgggagaac
agcgctgtgcaaagagcgtgggttggtgagctagtggatggcgagattaatctcactctg
atccctaaagcagggtgcagtaatactctaaatgcctcaaatgggttgggaaccatggaa
ggaatcccggaggagcccgatcttaacgaagcttttctcaggcctttgttcgcagaagtg
cgggaacgcgccgtccctctgcgcaggcgcagtcggcggtcggcgtggggcgctatgccg
gggcggcacgtttctcgagtccgggcattgtacaagcgcgtcttgcagctgcaccgtgtt
ctgcccccggacctcaaatccctgggcgaccagtacgtgaaagacgaatttaggagacat
aagaccgttggttctgacgaggcacagcgtttcttgcaagaatgggaggcaagtgacgct
cccttctctttgcccaagacctttggggttcctcggtgtccaggtttctag