GENSCAN 1.0	Date run:  4-Nov-116	Time: 08:46:55

Sequence gi568815592r:34778611_34987957 : 209347 bp : 42.83% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  13515  13558   44  2  2  110   78   107 0.536  10.23
 1.02 Intr +  36409  36540  132  1  0   94   32   146 0.906   8.44
 1.03 Intr +  43043  43205  163  2  1   93   80   161 0.861  14.86
 1.04 Intr +  44647  44738   92  0  2   79   88    85 0.996   5.47
 1.05 Intr +  55607  55796  190  2  1   77   46   287 0.999  22.07
 1.06 Intr +  56111  56251  141  1  0  109   89    86 0.995  10.43
 1.07 Intr +  56684  56854  171  1  0   91   66   206 0.964  17.92
 1.08 Intr +  57546  57738  193  2  1   76   80   206 0.942  16.74
 1.09 Intr +  61267  61458  192  2  0   77   49   137 0.868   7.24
 1.10 Intr +  73407  73605  199  1  1   68  110    56 0.385   3.29
 1.11 Intr +  73975  74075  101  1  2  161   43   -14 0.485   0.23
 1.12 Intr +  77007  77093   87  1  0  115   66    74 0.655   6.92
 1.13 Intr +  77629  77799  171  2  0  104   94    90 0.991  10.19
 1.14 Intr +  78180  78319  140  1  2   73   94   111 0.997   9.46
 1.15 Intr +  78719  78860  142  1  1   17  115    91 0.634   3.71
 1.16 Intr +  79114  79307  194  2  2  101  100   150 0.996  15.79
 1.17 Intr +  79802  80961 1160  1  2   99  108   973 0.503  87.15
 1.18 Intr +  85392  85588  197  0  2   71   84   249 0.919  20.94
 1.19 Intr +  88615  88769  155  2  2  103   65   108 0.978   8.87
 1.20 Intr +  88856  89006  151  1  1   40  110   192 0.980  15.41
 1.21 Intr +  92244  92506  263  1  2   69   70   232 0.997  15.78
 1.22 Intr +  92974  93082  109  0  1  110  101    89 0.957  11.34
 1.23 Intr +  93209  93315  107  0  2   69   94   103 0.998   8.01
 1.24 Term +  93703  93828  126  0  0  110   47   118 0.978   7.20
 1.25 PlyA +  98732  98737    6                               1.05

 2.10 PlyA -  98963  98958    6                               1.05
 2.09 Term - 100110  99980  131  1  2   72   41    42 0.378  -4.74
 2.08 Intr - 101453 101357   97  2  1   58  113   104 0.886   8.56
 2.07 Intr - 101766 101679   88  2  1   52   86   100 0.999   5.25
 2.06 Intr - 104470 104322  149  1  2   75   92   154 0.996  12.61
 2.05 Intr - 109387 109177  211  0  1   43   75   362 0.002  28.39
 2.04 Intr - 110981 110838  144  1  0    5   34   263 0.001  11.08
 2.03 Intr - 111205 111142   64  2  1   74   37   137 0.002   4.06
 2.02 Intr - 112860 112832   29  2  2   64  110    20 0.002  -1.36
 2.01 Init - 121280 121060  221  2  2   74   97    96 0.326   7.25
 2.00 Prom - 125235 125196   40                              -7.25

 3.00 Prom + 127984 128023   40                              -5.75
 3.01 Init + 128756 128929  174  1  0   45  103    86 0.778   5.19
 3.02 Intr + 136628 136645   18  1  0  121   74    26 0.196   0.39
 3.03 Intr + 138562 138745  184  0  1   12   87   168 0.172   7.54
 3.04 Intr + 146699 146786   88  0  1   92   42    52 0.034  -0.89
 3.05 Intr + 148110 148242  133  0  1  103  101    72 0.104   9.73
 3.06 Intr + 161469 161591  123  2  0   80   59    47 0.010   0.86
 3.07 Intr + 173508 173521   14  2  2   81  106    40 0.000  -2.24
 3.08 Intr + 188629 188709   81  1  0   91   97    77 0.413   6.73
 3.09 Intr + 191400 191556  157  0  1  109   52   155 0.993  13.09
 3.10 Intr + 193971 194033   63  2  0  117   93    85 0.994   9.90
 3.11 Intr + 203080 203376  297  0  0   98   69   375 0.806  32.75
 3.12 Intr + 204142 204217   76  0  1  117   94    76 0.988   9.27
 3.13 Intr + 204503 204604  102  0  0   97   64   125 0.988  10.23
 3.14 Intr + 204714 204815  102  1  0   66   86    64 0.903   3.23
 3.15 Intr + 206472 206725  254  1  2  140   49   253 0.365  22.83
 3.16 Intr + 208474 208594  121  0  1   66   80    81 0.309   4.25

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:34778611_34987957|GENSCAN_predicted_peptide_1|1539_aa
MAAAAAVSGAHAAARANCFISEPHALPLSNGDNNAYLMWDIAKINSDVMKTLRSVPGAKF
TKNLSPDKINLSTLKGEGQLTNLELDEEVLQNVLELPTWLAITRVYCNRASIRCLDKVEV
EMKTCEDPRPPNGQSPIALASGQSEYGFAEKVVEGMFIIVNSITIKIHSKAFHASFELWQ
LQGYSVNPNWQQSDLRLTRITDPCRGEVLTFKEITWQTLRIEADATDNGDQDPVTTPLRL
ITNQGRIQIALKRRTKDCNVISSKLMFLLDDLLWVLTDSQLKAMMKYAESLSEAMEKSAH
QRKSLAPEPVQITPPAPSAQQSWAQAFGGSQGNSNSSSSRLSQYFEKFDVKESSYHLLIS
RLDLHICDDSQSREPGVNSFTLSGRQRLYKSCAMPCCAVPSKLSPKSIASAGQLHLLQTI
VVQGQGMTFLCYGYMAVITGSGPLSGPGQVQRCRLGAKAWNRGPQEPALYPTPLWPSWYP
AARQSPLFSSVFFPQAGGVSPCGHHRCKEAVSPRAANCAAWGWGRGDASIPLAIPVGISG
VSANRLMGGAMQLTFRKMAFDYYPFHWAGDSCKHWVRHCEAMETRGQWAQKLVMEFQSKM
EKWHEETGLKPPWHLGVDSLFRRKADSLSSPRKNPLERSPSQGRQPAFQPPAWNRLRSSC
MVVRVDDLDIHQVSTAGQPSKKPSTLLSCSRKLHNLPTQVSAIHIEFTEYYFPDNQELPV
PCPNLYIQLNGLTFTMDPVSLLWGNLFCLDLYRSLEQFKAIYKLEDSSQKDEHLDIRLDA
FWLKRPKASWDLWSVHFTQISLDFEGTENFKGHTLNFVAPFPLSIWACLPLRWQQAQARK
LLLASEGRLKPSASFGSPVQSEALAPDSMSHPRSKTEHDLKSLSGLTEVMEILKEGSSGM
DNKGPLTELEDVADVHMLVHSPAHVRVRLDHYQYLALLRLKEVLQRLQEQLTKDTESMTG
SPLQNQTACIGVLFPSAEVALLMHPAPGAVDADSAGSDSTSLVDSELSPSEDRELKSDAS
SDQGPASPEKVLEESSIENQDVSQERPHSNGELQDSGPLAQQLAGKGHEAVESLQAKKLS
RTQASSSPAALKPPAGRETAVNGQGELIPLKNIEGELSSAIHMTKDATKEALHATMDLTK
EAVSLTKDAFSLGRDRMTSTMHKMLSLPPAKEPMAKTDEGVAAPVSGGAARLRFFSMKRT
VSQQSFDGVSLDSSGPEDRISVDSDGSDSFVMLLESESGPESVPPGSLSNVSDNAGVQGS
PLVNNYGQGSPAANSSVSPSGEDLIFHPVSVLVLKVNEVSFGIEVRGEDLTVALQAEELT
LQQLGTVGLWQFLHGQCPGTCFQESSTLKTGHIRPAVGLRFEVGPGAAVHSPLASQNGFL
HLLLHGCDLELLTSVLSGLGPFLEDEEIPVVVPMQIELLNSSITLKDDIPPIYPTSPGPI
PITLAMEHVVLKRSDDGVFHIGAAAQDKPSAEVLKSEKRQPPKEQVFLVPTGEVFEQQVK
ELPILQKELIETKQALANANQDKEKLLQEIRKYNPFFEL

>gi568815592r:34778611_34987957|GENSCAN_predicted_CDS_1|4620_bp
atggcggcggcggcggctgtgtccggtgctcacgccgcggcgagggcaaactgcttcata
tccgaacctcatgctcttcctctgagcaatggggataataatgcatacctcatgtgggat
attgcaaagattaattcagatgttatgaagacccttcgttcagtgcctggtgcaaagttc
actaagaatctttccccagacaaaatcaacctgagcaccctgaaaggggagggtcagctg
accaacctggagctggatgaagaggttctacagaatgtactggagctgcccacctggtta
gccatcactcgggtctactgcaacagggcctccatccggtgtctggataaggtagaggtg
gagatgaagacatgtgaggatcctcggccccccaatggacagtctcccattgcccttgct
tcaggacagagtgaatatggctttgccgaaaaggtggtggaagggatgttcatcattgtc
aattctatcaccatcaagattcactccaaggccttccacgcttcttttgaattgtggcag
ctccagggctatagtgtcaaccccaactggcagcagagtgaccttcgccttacccgcatc
actgacccctgccgaggagaggttttaacatttaaggaaataacttggcaaacactccga
attgaggcagatgctacagacaatggtgatcaggacccagtcaccactccattgaggctt
attacgaaccaaggcaggatccaaatagccctcaaaagaagaaccaaagattgcaatgtg
atatcctccaagctgatgttcctgttggatgacctgctctgggtgctgactgactcacag
ctcaaggctatgatgaagtatgcagagtcactgagtgaagccatggagaagtcagcccat
caaagaaagagcctggcccctgaacctgtgcagatcactccaccagcccccagtgcccag
cagtcctgggcccaggcatttggtggcagccagggcaacagcaacagcagcagcagccgc
ctcagccagtactttgagaaatttgatgtgaaagagtcctcctaccatctgctcatctcc
cgcctggacctgcacatttgtgatgatagccagtcccgagagccaggggtcaatagcttc
actctgtctgggcgccagcgcctgtacaagagctgtgccatgccgtgctgtgccgtgccg
tccaagctgagccccaagagcatagcatcagcagggcagttacaccttttacagacaata
gtggtacagggccaagggatgaccttcctatgttatggctacatggctgtgataacaggc
agtgggcccctctctggcccagggcaggtccagagatgtcgtctaggagctaaagcctgg
aatcggggaccccaggagcctgctttgtaccctaccccactatggccaagctggtaccca
gctgcaagacaaagtccccttttctcttctgtcttctttcctcaagcaggaggagtctct
ccttgtggtcaccacaggtgcaaggaagcagtctctcccagagctgcaaactgtgctgca
tggggttgggggaggggtgatgcaagcattcctttggctatcccagttggcatctcaggt
gtctctgccaacagactcatgggtggtgccatgcagcttaccttccgcaagatggcgttt
gactattaccctttccattgggcaggtgatagctgcaaacattgggtacgccactgtgag
gccatggagacccgaggccagtgggcccagaagctggtgatggaatttcagagcaaaatg
gagaagtggcatgaagagacgggtctgaaaccaccctggcaccttggagtagactctctc
tttcggagaaaagcagattctctttccagtcctcgaaagaaccctcttgagagaagcccc
tctcagggcagacagcctgcctttcagcctccagcatggaaccgcttacgctctagctgc
atggtggtacgggtggatgacctggacatccaccaggtttccaccgctggacagccaagt
aaaaagccatctacactcctttcctgcagtcggaaacttcacaacctccctacccaggtc
tctgccattcatattgagttcacagagtattacttcccagataatcaggagcttccagtt
ccttgtcctaatctctacattcagttaaatggtctgacatttactatggatcctgtcagt
ttgctctggggaaacctcttttgcctggatttataccgcagcttggagcagttcaaagct
atctacaagctggaagattcaagtcagaaagatgaacacttggacatccgactagatgca
ttctggttgaagagacctaaggcttcctgggatctctggtctgtccactttacccagatc
tccttggactttgagggaacagaaaacttcaaaggccataccttgaattttgtagccccc
ttccccctgtccatttgggcctgcctacccctccgctggcagcaagcccaggcacggaag
cttcttttggcctcagaggggaggctgaaaccatcagccagttttggaagtcctgtccag
tctgaggctcttgcccctgactctatgtcccatccgcggtcaaagactgaacatgacttg
aaaagcttatcaggacttacagaagtcatggaaattctgaaagaaggcagtagtggtatg
gacaacaaagggcctctgacagagctggaggatgtagcagatgttcatatgcttgtacat
tccccggcccatgtccgcgtgaggcttgaccactaccagtacttggctctgcttcgcctg
aaggaggtgctgcagaggcttcaggagcagctgactaaggatacagagtcaatgactggg
tctcccctgcagaatcagacagcttgcattggagttctctttcccagtgctgaagtggct
ctgcttatgcatcctgcacccggtgctgtcgatgctgactctgcaggctcagatagcact
agcctcgtagattcagagctatctccttcagaggatcgggaactgaagtctgatgcctca
tcagaccagggcccagcaagccctgagaaggtcttggaggaaagtagcattgaaaatcag
gatgtatcccaggagaggccacatagcaatggagaactgcaggactcaggtccacttgcc
cagcagctggcagggaagggccatgaggcagtagagtccctacaggccaagaaactgagc
agaacccaagcctccagctcaccagctgcattgaagcccccagctggcagggagactgct
gtgaatggacagggtgagctcatccccttgaagaacattgagggagaattgtcaagtgct
attcacatgaccaaggatgccaccaaggaggctctacatgccaccatggacctcaccaag
gaagctgtgtccctgactaaggatgccttcagtttgggcagagatcgaatgacctccacc
atgcacaagatgttgtccctgcccccagccaaggagcccatggccaagacagatgagggg
gtggcagccccagtgagtggaggtgctgcacgactccgatttttctccatgaagaggacg
gtatctcaacagtcatttgatggtgtctcattggatagcagtggccctgaagaccggatt
tcagtggacagtgatggcagtgatagctttgtgatgctcttggagtctgagtctggtcca
gaatctgttccaccaggatctctttcaaatgtctcagataatgctggtgttcaagggagc
cctcttgtgaataattatggccaggggtcaccagcagccaacagttcagtttcacccagt
ggagaagacctcatctttcacccggtctcagttctggtcctgaaggtgaatgaggtgtct
tttgggattgaggtacgtggtgaggacctgactgtggccctgcaagcagaggaactgacc
ctccagcagctgggcaccgtgggactctggcagttcctgcatggacagtgcccaggtaca
tgctttcaggaatcctcaactttgaagactggccacatcaggccagctgtgggccttcgc
tttgaggtggggcctggagcagctgttcattcccccctggcctcacaaaatggcttccta
catttattgcttcatggctgtgacctcgagctgctcacttcagtgctcagtggcctgggg
cccttcttggaggatgaggagatcccggtggtagtccccatgcagattgagcttctgaac
tccagcatcaccctaaaggatgatatcccccccatctatccaacatctccaggccccatc
cccatcactctggccatggaacatgttgtgctgaagaggagtgatgatggtgtgttccac
ataggcgctgctgctcaggacaaaccatcagctgaagtacttaaaagtgagaagagacag
cccccaaaagaacaggtgtttttggtgcccacaggagaggtttttgaacagcaggtgaaa
gaactgcctatcctacaaaaagaacttatagaaactaaacaagccttggccaatgccaac
caggataaagaaaaacttcttcaggagattaggaaatataaccccttctttgagctctga

>gi568815592r:34778611_34987957|GENSCAN_predicted_peptide_2|377_aa
MAAGQPEKARIRRLAPLRTKANAQTPPGWIRGRVVSMMWIVMSKAKTGAPPQVQQRVKVL
KTTSESLRTFQTLRHQNCRVANPAGSERETRRARSSVDSDLRALRLERGWLEEPRPPPPP
PLPPPPPPEPPPPPPPKPEESRFPDSSFSTAGRHLRDLLSPPILSVMDDAHESPSDKGGE
TGESDETAAVPGDPGATDTDGIPEETDGDADVDLKEAAAEEGELESQDVSDLTTVEREDS
SLLNPAAKKLKIDTKEKKEKKQKVDEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAI
KRLIQSITGTSVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMREAVRRL
KSKGQIPNSKHKKIIFF

>gi568815592r:34778611_34987957|GENSCAN_predicted_CDS_2|1134_bp
atggctgcagggcaacctgaaaaagcaagaatcaggcggctggccccattgaggacaaaa
gccaatgcacagactccaccaggctggatcagaggaagagtggtgagcatgatgtggata
gttatgagcaaagccaagactggggctcctccccaggtacagcaaagagttaaagttcta
aaaaccacatcagaaagtctaagaacctttcagacactcagacatcagaactgcagagtg
gcaaatccagccgggtcagaacgggagaccaggcgagcccggagcagcgtggactcggac
ctgcgcgccctccgactggagagggggtggctggaagagccgaggccgccgccgccgccg
ccgctgccgccgccgccgcccccagagccaccgccgccgccgcccccaaagcctgaggag
agccgcttcccggacagcagcttctccaccgccgggaggcatctccgcgatctcctctcc
cctccaatcctatccgtgatggacgatgcccacgagtcgccctccgacaaaggtggagag
acaggggagtcggatgagacggccgctgtgcccggggacccgggggctaccgacaccgat
ggaatcccagaggaaactgacggagacgcagatgtggacttgaaagaagctgcagcggag
gaaggcgagctcgagagtcaggatgtctcagatttaacaacagttgaaagggaagactca
tcattacttaatcctgcagccaaaaaactgaaaatagataccaaagaaaagaaagagaaa
aagcagaaagtagatgaagatgagattcagaagatgcaaatcctggtttcttctttttct
gaggagcagctgaaccgttatgaaatgtatcgccgctcagctttccctaaggcagccatc
aaaaggctgatccagtccatcactggcacctctgtgtctcagaatgttgttattgctatg
tctggtatttccaaggttttcgtcggggaggtggtagaagaagcactggatgtgtgtgag
aagtggggagaaatgccaccactacaacccaaacatatgagggaagccgttagaaggtta
aagtcaaaaggacagatccctaactcgaagcacaaaaaaatcatcttcttctag

>gi568815592r:34778611_34987957|GENSCAN_predicted_peptide_3|663_aa
MWGIGSRTPIYNKILVYSSPEVSCEKPKYVKSQTSTHTGFESHKRYIFYLRLVGKNLHVS
AMGLGKSQERRKKALKSQPQQPADSFPSLPTVEGLTTSGEVAAGFWLSGEALSSCVVCGE
AALTQVSAHRMAFLKSYVADDIKGEGKESLVGPWLRRKALFSFAAEHQSQSLIGGLSLLP
VISYRILDSVQLWGLAVGNAKNSYKISSGFKNRVYFALSDEYIVSPKLRFHIVSLGKQLL
LCDPGMWRGPNVNCVDSTGYTPLHHAALNGHKDVVEVLLRNDALTNVADSKGCYPLHLAA
WKGDAQIVRLLIHQGPSHTRVNEQNALEIKELKKYGPFDPYINAKNNDNETALHCAAQYG
HTEVVKVLLEELTDPTMRNNKFETPLDLAALYGRLEVVKMLLNAHPNLLSCNTKKHTPLH
LAARNGHKAVVQVLLDAGMDSNYQTEMGSALHEAALFGKTDVVQILLAAGTDVNIKDNHG
LTALDTVRELPSQKSQQIAALIEDHMTGKRSTKEVDKTPPPQPPLISSMDSISQKSQGDV
EKAVTELIIDFDANAEEEGPYEALYNAISCHSLDSMASGRSSDQDSTNKEAEAAGVKPAG
VRPVCDPGLTPPGGCVGWLAPEQKRVDALPFLLVYVVAVLSSWPLVINYGKGPVYLLVNT
MDX

>gi568815592r:34778611_34987957|GENSCAN_predicted_CDS_3|1989_bp
atgtggggtattggttcgaggacccccatctataacaaaatccttgtatactcaagtcct
gaggtcagctgtgagaaacccaagtatgtgaaaagtcagacctctacacacacaggtttt
gaatcccacaaacgctatattttttatctgcgtttggttggaaaaaatctgcatgtcagt
gccatgggcttggggaagagccaggagagaaggaagaaggctttgaagagccagccccag
cagcctgctgacagttttccttctctccccactgtggaaggactgactaccagtggagag
gtggcagcaggcttttggctaagtggagaggctctctcttcctgtgtagtttgtggagag
gcagcgttgactcaagtctctgcccatagaatggctttcctcaagtcctatgtggcagat
gacatcaagggtgaggggaaggagagtctggttgggccctggctgaggagaaaagctctt
ttttcatttgctgctgagcaccagagccagtccctgattgggggcttgagcttgcttcct
gtcatcagttacagaatattagatagtgtgcaactttggggcttggctgtggggaatgcc
aagaatagttacaagataagcagtggatttaaaaacagagtgtattttgcactgtctgat
gagtacattgtgtctccgaagttgagattccacatagtgagccttggaaaacaactgctg
ctctgcgaccctggcatgtggagagggccaaatgtgaactgtgttgacagcactggctac
acacccctgcaccatgctgctttgaatggccataaggatgtggtcgaggttcttctgagg
aacgatgcgctgaccaacgtggctgactcaaaaggctgctaccctctgcatttggcagcc
tggaaaggagatgcccagatagtgcggttgctcatccatcaagggccttcacacaccaga
gtcaatgaacagaatgctcttgagatcaaagaactcaaaaagtacggcccctttgaccct
tatatcaatgccaagaacaatgacaacgagacagccctgcattgtgcagcgcagtatggc
cacacagaggtggtgaaggtgctcttagaggagctgacggaccccaccatgcgcaacaac
aaattcgagacccctttggacctggcagcactgtacgggcgactggaggtggtgaaaatg
ctccttaatgcacaccccaacctcctgagctgcaacactaagaagcacacccctctgcac
ttggcagcaaggaatggccacaaagccgtggtccaggtcctcctcgatgctggcatggac
agcaactaccagacggagatgggcagtgctttgcatgaggctgctttgtttggcaagacc
gatgtggtgcaaatcctgctggctgcaggaactgacgtcaacataaaagataaccatgga
ctgactgccctagacactgttcgggaactgccttctcaaaagagccagcaaatagcagca
ttaattgaagatcacatgactggaaaaagaagtacaaaagaagtagataaaaccccccca
ccccagccacctctcatctccagtatggactccatatcacagaagtctcagggtgacgtg
gagaaagcagtgactgaactgattatagattttgatgcaaatgctgaagaagagggtccc
tacgaagctctgtataatgccatctcctgccattcgttggacagcatggccagcgggcga
tcatctgaccaagactccacgaacaaggaggctgaggcagcaggagtgaaacctgctgga
gtgaggcctgtatgtgacccggggcttacacctcctgggggctgtgttggctggctggcc
cctgagcagaaacgggtggatgctttgccatttttacttgtgtatgttgtggctgtgctg
tcttcctggcccttggtaattaactatggcaaagggcctgtttacctcttggtaaacaca
atggatgnn