GENSCAN 1.0	Date run:  4-Nov-116	Time: 08:38:19

Sequence gi568815582r:58014810_58229115 : 214306 bp : 47.44% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2525   2630  106  2  1  117   95    81 0.985  11.92
 1.02 Intr +   4163   4246   84  1  0  143   68    -2 0.906   3.32
 1.03 Term +   5332   5436  105  0  0   82   53   185 0.956  12.81
 1.04 PlyA +   6783   6788    6                               1.05

 2.05 PlyA -   6804   6799    6                               1.05
 2.04 Term -   8169   7927  243  0  0  107   55    60 0.282   0.50
 2.03 Intr -   8516   8419   98  0  2   96   86    37 0.739   4.03
 2.02 Intr -  10952  10838  115  2  1   36   80    47 0.310  -1.28
 2.01 Init -  11697  11356  342  0  0   82   57   300 0.681  23.54
 2.00 Prom -  12889  12850   40                              -9.16

 3.00 Prom +  13245  13284   40                             -11.53
 3.01 Init +  15589  15796  208  0  1   97   25   178 0.819  11.60
 3.02 Intr +  20370  20505  136  1  1   26   78    45 0.167  -3.07
 3.03 Intr +  21928  21961   34  1  1  102   61    36 0.477   0.53
 3.04 Intr +  22663  22811  149  0  2   91   64   221 0.988  19.03
 3.05 Intr +  23457  23585  129  0  0  103   63   222 0.998  21.01
 3.06 Intr +  25066  25373  308  1  2   77   77   514 0.988  45.29
 3.07 Intr +  25728  25889  162  1  0  103   86   309 0.993  32.15
 3.08 Intr +  26808  27061  254  1  2  128   47   203 0.545  17.35
 3.09 Intr +  27422  27560  139  1  1   96  105   178 0.994  20.34
 3.10 Intr +  28401  28551  151  1  1  123   99   329 0.999  36.72
 3.11 Intr +  28703  28818  116  2  2   81   82   146 0.854  13.39
 3.12 Intr +  30198  30584  387  1  0  101   57   785 0.269  71.46
 3.13 Intr +  38185  38316  132  2  0   37   97    65 0.090   2.92
 3.14 Intr +  42590  42724  135  0  0  109   23    49 0.019   1.04
 3.15 Intr +  56843  56960  118  0  1  120   91     6 0.019   3.62
 3.16 Intr +  78976  79152  177  1  0  139   65     4 0.588   2.23
 3.17 Intr +  79217  79304   88  2  1  120   16    65 0.367   2.47
 3.18 Intr +  81939  81998   60  2  0   58   94    44 0.161   0.93
 3.19 Intr +  83728  83887  160  0  1   76   36    83 0.234   1.46
 3.20 Term +  84052  84230  179  2  2  103   41    86 0.281   3.25
 3.21 PlyA +  86093  86098    6                               1.05

 4.08 PlyA -  86657  86652    6                               1.05
 4.07 Term -  99221  99216    6  2  0  122   36     0 0.461  -3.93
 4.06 Intr - 100111 100001  111  1  0   28  121    85 0.934   6.38
 4.05 Intr - 100648 100460  189  1  0  114   84   310 0.999  32.98
 4.04 Intr - 101343 101232  112  2  1   78  111    88 0.998  10.48
 4.03 Intr - 102142 102063   80  1  2  103  100    96 0.999  10.65
 4.02 Intr - 105268 105215   54  1  0  115   64    17 0.613   1.18
 4.01 Init - 114306 114223   84  0  0   68   58   113 0.864   7.12
 4.00 Prom - 129558 129519   40                              -6.26

 5.14 PlyA - 140345 140340    6                               1.05
 5.13 Term - 143544 143364  181  2  1  147   42   143 0.937  12.68
 5.12 Intr - 146256 146085  172  1  1   93    9    57 0.254  -2.70
 5.11 Intr - 150899 150751  149  1  2   91   65   188 0.974  16.68
 5.10 Intr - 151875 151775  101  0  2   73   98   163 0.999  14.71
 5.09 Intr - 152499 152398  102  0  0   88   99    79 0.997   9.37
 5.08 Intr - 152986 152876  111  1  0   75   97    94 0.989   9.58
 5.07 Intr - 153884 153801   84  2  0   91   76    17 0.634   0.82
 5.06 Intr - 159701 159642   60  2  0   64  106    86 0.838   6.93
 5.05 Intr - 172047 171946  102  0  0   41   66   127 0.954   6.17
 5.04 Intr - 182035 181924  112  0  1   93  113   127 0.987  16.08
 5.03 Intr - 183029 182824  206  2  2   98   55   116 0.698   7.30
 5.02 Intr - 186896 186853   44  0  2  102   85     1 0.153  -0.84
 5.01 Init - 195533 195437   97  2  1   61   98    62 0.213   4.97
 5.00 Prom - 214154 214115   40                              -2.76


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:58014810_58229115|GENSCAN_predicted_peptide_1|98_aa
XTFIGLEVTSGHAQFLDLVSEVDRVMEEFNLTTFYQDPSFHLSLAWCVGDARLQLEGQCL
QELQAIVDGFEDAEVLLRVHTEQVRCKSGNKFFSMPLK

>gi568815582r:58014810_58229115|GENSCAN_predicted_CDS_1|297_bp
nngacctttattgggcttgaggtcacttcagggcatgcccagttcctggacctggtttca
gaggtggacagagtcatggaggaattcaacctcaccactttctaccaggatccttctttc
cacctcagcctggcctggtgtgtgggtgatgcacgtctccagctggaggggcagtgcctg
caggaactacaggcaatcgtggatgggtttgaagatgctgaggtgctgctgcgcgtgcac
actgagcaagtccgctgcaagtctgggaacaagttcttctcgatgcctttgaagtga

>gi568815582r:58014810_58229115|GENSCAN_predicted_peptide_2|265_aa
MDLRVFGRYAKAQAAQKHQEQRQQSRPRRLLPVAEEAARPARPSGRARVAAHALGAQPSS
EHCTPDPRTRLGNLRRSLAPGPAGAPRTSGSRSPPEPPRSPRQIPKPEEKRAGQPSSPRA
AAAALLKGQCAPNARTRAGTGGGAPAAGFSQAGAPRAMHPPDPPSKVKQALGLFVPRQGI
NKQAKNCLPCFSSYGESPVMEEPRLLLHCQRERSLNGLTLLQRHTQCLGARQAPAASLLL
RPSLPTPPPQRDSCFLPPLPPSILH

>gi568815582r:58014810_58229115|GENSCAN_predicted_CDS_2|798_bp
atggacctccgcgtcttcggccgctacgccaaggcccaggcagcccagaagcaccaggag
cagcggcagcagtcgcggccgcgccgcctcctcccggtcgccgaggaggctgcccgtcca
gcccggccgtccgggcgcgctcgggtcgctgcccatgctctcggcgcccagcccagctcg
gaacactgcacgccggatcctcgcacgcgccttggaaacttgcgacgctccctggctcct
ggcccggcaggcgcgccgcggacctcgggctcccggtccccgccggagccgcctaggtcg
cctcggcaaattcccaagcccgaggagaagcgggcagggcagccctcctccccgcgcgcc
gcggccgccgcgctcttaaagggccagtgtgctcccaatgcgcggacccgggcggggacc
gggggcggtgccccagccgcaggcttctcacaagcaggggcccctcgggcgatgcaccca
cccgacccaccatcaaaggtgaagcaggccttgggactcttcgtgccaagacaaggaata
aacaaacaagccaagaattgtctcccatgtttctcctcttatggagaatctcctgttatg
gaagagccccggctgcttctgcactgtcagcgggagcgctcgctcaacgggcttactctg
ctccagaggcacactcagtgtctgggtgcccgccaagctcctgccgccagcctcctcctc
aggcccagcctgcccacccctccccctcagcgagactcctgcttccttcctccattgcca
ccttccattctccattga

>gi568815582r:58014810_58229115|GENSCAN_predicted_peptide_3|1073_aa
MELGLDPRGKEGCLFPNPMALVGMEEKVGRDPTQPPVSGQVDKPLVPAISQPLEMPPILL
PSADGDAGQGWWICCSTPSSTGALGEVSRAWEEQGGYPRHCQYLIELWECALGQRRFKVF
GEQCQRNWLRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKR
PRCGVPDQFGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYTEKLGWYHSMEAVRRAF
RVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPG
LGGDTHFDADEPWTFSSTDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDN
FKLPEDDLRGIQQLYGTPDGQPQPTQPLPTVTPRRPGRPDHRPPRPPQPPPPGGKPERPP
KPGPPVQPRATERPDQYGPNICDGDFDTVAMLRGEMFVFKGRWFWRVRHNRVLDNYPMPI
GHFWRGLPGDISAAYERQDGRFVFFKGDRYWLFREANLEPGYPQPLTSYGLGIPYDRIDT
AIWWEPTGHTFFFQEDRYWRFNEETQRGDPGYPKPISVWQGIPASPKGAFLSNDAAYTYF
YKGTKYWKFDNERLRMEPGYPKSILRDFMGCQEHVEPGPRWPDVARPPFNPHGGAEPGAD
SAEGDVGDGDGDFGAGVNKDGGSRVVVQMEEVARTVNVVMVLVPLLLLLCVLGLTYALVQ
MQRKGPQGAHLFIRQKYTENQGSLWGLWHNPTVALRKSPWGSSRQRVEDNRRGAQNVIRR
LAACTHAYASSQFKVVQGCRSRLRTLKEHQRRGSHWPVAAASSSSPDTLWILVLLFLPLE
SPNTPHSQLTQLRLSSTRSLIPILRASPQVVPPAPQTTPHPPCSSPIAPSPIGVSSSPLH
CSSQNPGFILSWSPLAAFFLPLLLAPIFPKNHLLRADMGPWHLICQKGQYHLSSRCICEE
QTLSHFCSRAPAALLFFISVFLFKFQREESNSRGLALASPGDHHAIVFSQQPRAGASVFP
PGEDFFISPLLAIKPFYAAETQLGAQEGGQPQGPHEDPKTMTTTVTMTTLTVD

>gi568815582r:58014810_58229115|GENSCAN_predicted_CDS_3|3222_bp
atggagctgggcctggatcccagaggcaaagagggatgcctcttccctaatcccatggcc
ctcgtgggaatggaagaaaaagtgggaagagacccaactcagcctccagtatcaggacag
gtggataagcccctggtaccagccattagccagcccctggagatgccccccatcctgctg
ccatcggccgatggtgatgcaggccaaggatggtggatctgctgctccacaccttccagc
acaggagccttgggagaggtttcccgtgcttgggaagaacagggagggtacccacgacat
tgccagtatcttattgagctgtgggaatgcgccctgggccagaggagatttaaggtcttt
ggggagcagtgccaaagaaactggctgcggctttatggctacctgcctcagcccagccgc
catatgtccaccatgcgttccgcccagatcttggcctcggcccttgcagagatgcagcgc
ttctacgggatcccagtcaccggtgtgctcgacgaagagaccaaggagtggatgaagcgg
ccccgctgtggggtgccagaccagttcggggtacgagtgaaagccaacctgcggcggcgt
cggaagcgctacgccctcaccgggaggaagtggaacaaccaccatctgacctttagcatc
cagaactacacggagaagttgggctggtaccactcgatggaggcggtgcgcagggccttc
cgcgtgtgggagcaggccacgcccctggtcttccaggaggtgccctatgaggacatccgg
ctgcggcgacagaaggaggccgacatcatggtactctttgcctctggcttccacggcgac
agctcgccgtttgatggcaccggtggctttctggcccacgcctatttccctggccccggc
ctaggcggggacacccattttgacgcagatgagccctggaccttctccagcactgacctg
catggaaacaacctcttcctggtggcagtgcatgagctgggccacgcgctggggctggag
cactccagcaaccccaatgccatcatggcgccgttctaccagtggaaggacgttgacaac
ttcaagctgcccgaggacgatctccgtggcatccagcagctctacggtaccccagacggt
cagccacagcctacccagcctctccccactgtgacgccacggcggccaggccggcctgac
caccggccgccccggcctccccagccaccacccccaggtgggaagccagagcggccccca
aagccgggccccccagtccagccccgagccacagagcggcccgaccagtatggccccaac
atctgcgacggggactttgacacagtggccatgcttcgcggggagatgttcgtgttcaag
ggccgctggttctggcgagtccggcacaaccgcgtcctggacaactatcccatgcccatc
gggcacttctggcgtggtctgcccggtgacatcagtgctgcctacgagcgccaagacggt
cgttttgtctttttcaaaggtgaccgctactggctctttcgagaagcgaacctggagccc
ggctacccacagccgctgaccagctatggcctgggcatcccctatgaccgcattgacacg
gccatctggtgggagcccacaggccacaccttcttcttccaagaggacaggtactggcgc
ttcaacgaggagacacagcgtggagaccctgggtaccccaagcccatcagtgtctggcag
gggatccctgcctcccctaaaggggccttcctgagcaatgacgcagcctacacctacttc
tacaagggcaccaaatactggaaattcgacaatgagcgcctgcggatggagcccggctac
cccaagtccatcctgcgggacttcatgggctgccaggagcacgtggagccaggcccccga
tggcccgacgtggcccggccgcccttcaacccccacgggggtgcagagcccggggcggac
agcgcagagggcgacgtgggggatggggatggggactttggggccggggtcaacaaggac
gggggcagccgcgtggtggtgcagatggaggaggtggcacggacggtgaacgtggtgatg
gtgctggtgccactgctgctgctgctctgcgtcctgggcctcacctacgcgctggtgcag
atgcagcgcaagggaccacaaggcgcccatctcttcatccgtcaaaagtatactgagaac
cagggttccctctggggtctctggcacaaccccacagttgctcttcgcaagagcccctgg
ggatcaagtagacaaagggtggaagataacaggaggggggcacagaatgtgattaggagg
cttgctgcatgcacgcatgcctatgccagcagtcagttcaaggtggtgcagggctgcagg
agcaggcttcggacattaaaggagcatcagagaagaggcagccattggccagtggcagca
gcctcctcatcctctccagacacactctggatcttggttctgctcttcttgcctctggag
agccccaacactccccattcccagttgactcagctcaggctctccagcactcgtagcctt
atacccatcctgcgggcatctccccaagttgttccaccagctcctcagactaccccccac
ccaccctgctcctccccaattgctcccagccccattggtgtctcctccagccccctccat
tgctcaagtcagaacccagggttcatcctgagctggtccccgctggctgctttcttcctg
cccctgctcctggctcccatcttccccaaaaatcacctcctaagggccgacatgggacct
tggcacctcatctgtcaaaaaggacagtaccacctgtccagcaggtgcatctgtgaggaa
cagactctttctcacttctgctccagagcccccgcggctctcctcttcttcatctctgtt
ttcctcttcaaattccagagagaggaatccaacagccgtggcctggcactggccagccca
ggagatcatcatgcaatcgtcttcagccagcagcccagggcaggagcctcagtcttccca
cctggtgaagatttcttcatttctcctctcctcgccataaaacccttctatgcagctgag
acacagttgggggcccaagaaggaggccaaccacaaggaccacatgaggaccctaagaca
atgacaactacagttaccatgacaacactcactgtggactga

>gi568815582r:58014810_58229115|GENSCAN_predicted_peptide_4|211_aa
MFKNTFQSGFLSILYSIGSKPLQIWDKKKIQEEYRHLGWEHEMASEVRNGHIKRITDNDI
QSLVLEIEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRR
FRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLLDFTRRAYGTNYIETLRVQIHANCRI
RRVYFSDRLYSEDELPAEFKLYLPVQNKAKQ

>gi568815582r:58014810_58229115|GENSCAN_predicted_CDS_4|636_bp
atgttcaaaaacacgttccagagcggcttcctctccatcctctacagcatcggcagcaag
cctctgcaaatctgggacaaaaagaaaatacaggaggaatatcgccacttaggttgggaa
catgagatggcgagtgaggtacggaatggccacatcaaaagaatcactgataatgacatc
cagtccctggtgctagagattgaagggacaaatgtaagcaccacatatatcacatgccct
gcagaccccaagaagacgctgggaattaaacttcctttccttgtcatgattatcaaaaac
ctgaagaagtattttaccttcgaagtgcaggtactagatgacaagaatgtgcgtcgtcgc
tttcgggcaagtaactaccagagcaccacccgggtcaaacccttcatctgcaccatgccc
atgcggctggatgacggctggaaccagattcagttcaacttgctagacttcacacggcga
gcatacggcaccaattacatcgagaccctcagagtgcagatccatgcaaattgtcgcatc
cgacgggtttacttctcagacagactctactcagaagatgagctgccggcagagttcaaa
ctgtatctcccagttcagaacaaggcaaagcaataa

>gi568815582r:58014810_58229115|GENSCAN_predicted_peptide_5|506_aa
MVDSRAGTGKVEDEPGANFVPKTRKRSEDDRTESPPYPSSYPSETPSRPAARCLLRPTPR
VPRRAAAATLCAPRRPPVPPAMPGPAAGSRARVYAEVNSLRSREYWDYEAHVPSWGNQDD
YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGGTNIIKLI
DTVKDPVQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLID
WGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHG
QDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSP
EALDLLDKLLRYDHQQRLTAKEAMEHPYFCRVGGWVGEAIECMTQTKLSWAFSPTREALM
SFIEALKHQSLSQASSQTFCNMSALTRSVAVLPLFHKQNKNQIKRLNAYREITFREQTQN
GGRFGEHELDQAKGSPPPYIKPHFRM

>gi568815582r:58014810_58229115|GENSCAN_predicted_CDS_5|1521_bp
atggttgattccagggctggaacaggaaaagtagaagatgaaccaggagcaaattttgtg
ccaaaaacaagaaagcgatcagaggacgataggacagagtcaccaccctatccctcttca
tatccaagtgagactccttcgcgcccggcggcccgctgcctcctccgcccgacgccccgc
gtcccccgccgcgccgccgccgccaccctctgcgccccgcgccgccccccggtcccgccc
gccatgcccggcccggccgcgggcagcagggcccgggtctacgccgaggtgaacagtctg
aggagccgcgagtactgggactacgaggctcacgtcccgagctggggtaatcaagatgat
taccaactggttcgaaaacttggtcggggaaaatatagtgaagtatttgaggccattaat
atcaccaacaatgagagagtggttgtaaaaatcctgaagccagtgaagaaaaagaagata
aaacgagaggttaagattctggagaaccttcgtggtggaacaaatatcattaagctgatt
gacactgtaaaggaccccgtgcaactctaccagatcctgacagactttgatatccggttt
tatatgtatgaactacttaaagctctggattactgccacagcaagggaatcatgcacagg
gatgtgaaacctcacaatgtcatgatagatcaccaacagaaaaagctgcgactgatagat
tggggtctggcagaattctatcatcctgctcaggagtacaatgttcgtgtagcctcaagg
tacttcaagggaccagagctcctcgtggactatcagatgtatgattatagcttggacatg
tggagtttgggctgtatgttagcaagcatgatctttcgaagggaaccattcttccatgga
caggacaactatgaccagcttgttcgcattgccaaggttctgggtacagaagaactgtat
gggtatctgaagaagtatcacatagacctagatccacacttcaacgatatcctgggacaa
cattcacggaaacgctgggaaaactttatccatagtgagaacagacaccttgtcagccct
gaggccctagatcttctggacaaacttctgcgatacgaccatcaacagagactgactgcc
aaagaggccatggagcacccatacttctgcagggtaggtggctgggtaggagaagctatt
gagtgtatgacgcagaccaagctttcctgggccttctcaccaactagagaagcgctgatg
tcgttcattgaggcacttaaacaccagtcactcagccaggcctcctcccagacattctgt
aacatgtcagcactcacaaggtctgttgcggttctcccacttttccataagcagaacaag
aaccaaatcaaacgtcttaacgcgtatagagagatcacgttccgtgagcagacacaaaac
ggtggcaggtttggcgagcacgaactagaccaagcgaagggcagcccaccaccgtatatc
aaacctcacttccgaatgtaa