GENSCAN 1.0	Date run:  4-Nov-116	Time: 08:31:39

Sequence gi568815584r:94668494_94870015 : 201522 bp : 47.24% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  10630  10641   12  0  0   99   92     8 0.289   2.53
 1.02 Intr +  20879  21290  412  1  1  109   91   159 0.926  12.06
 1.03 Term +  22237  22325   89  2  2  101   37    61 0.617   0.12
 1.04 PlyA +  24084  24089    6                               1.05

 2.03 PlyA -  25403  25398    6                               1.05
 2.02 Term -  27139  27036  104  2  2   83   55    58 0.636   0.44
 2.01 Init -  29895  29844   52  0  1   66   94    87 0.966   8.43
 2.00 Prom -  31791  31752   40                              -0.56

 3.00 Prom +  38751  38790   40                              -5.86
 3.01 Init +  39172  39234   63  0  0   89   81    26 0.554   3.24
 3.02 Intr +  42218  42348  131  1  2   38   80   125 0.389   6.19
 3.03 Term +  57782  58577  796  2  1   48   32   637 0.055  46.86
 3.04 PlyA +  58732  58737    6                               1.05

 4.07 PlyA -  59130  59125    6                               1.05
 4.06 Term -  69181  68975  207  1  0  130   50    74 0.794   5.14
 4.05 Intr -  69323  69227   97  1  1   43   70    23 0.047  -3.99
 4.04 Intr -  82711  82609  103  2  1  112   84     4 0.009   1.63
 4.03 Intr - 100156 100027  130  1  1   91   93   232 0.756  24.27
 4.02 Intr - 100724 100465  260  0  2  107   80   560 0.849  54.28
 4.01 Init - 101522 101168  355  2  1   62   91   640 0.582  59.00
 4.00 Prom - 114188 114149   40                              -4.46

 5.04 PlyA - 115474 115469    6                              -0.45
 5.03 Term - 119209 119153   57  1  0   77   50    81 0.788   0.89
 5.02 Intr - 119587 119482  106  0  1   99   46    49 0.806   2.02
 5.01 Init - 121110 121046   65  0  2   62   75   102 0.820   7.01
 5.00 Prom - 125828 125789   40                              -2.66

 6.02 PlyA - 126122 126117    6                               1.05
 6.01 Sngl - 132970 132740  231  1  0   99   49   238 0.869  16.11
 6.00 Prom - 133346 133307   40                              -7.36

 7.04 PlyA - 133667 133662    6                               1.05
 7.03 Term - 141258 141026  233  1  2   89   54   124 0.510   5.74
 7.02 Intr - 149531 149373  159  0  0   45   32   117 0.336   1.76
 7.01 Init - 151989 151917   73  0  1  109   96    -9 0.188   3.24
 7.00 Prom - 155754 155715   40                              -2.46

 8.00 Prom + 173824 173863   40                              -4.06
 8.01 Init + 175912 175934   23  0  2  108   97   -23 0.616   0.04
 8.02 Intr + 178402 178579  178  1  1   82   86   118 0.834  10.92
 8.03 Term + 185359 185412   54  0  0   59   48    75 0.234  -1.84
 8.04 PlyA + 185644 185649    6                               1.05

 9.00 Prom + 186371 186410   40                              -4.06
 9.01 Init + 188261 188336   76  1  1   52   78    91 0.555   4.09
 9.02 Term + 191573 191604   32  0  2  126   44    30 0.675   0.42
 9.03 PlyA + 191814 191819    6                               1.05

10.02 PlyA - 192487 192482    6                               1.05
10.01 Term - 200683 200510  174  1  0   95   42    97 0.739   3.56

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 104589 104766  178  0  1   73   47   167 0.983   8.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:94668494_94870015|GENSCAN_predicted_peptide_1|170_aa
MAYETRKQQGRLNSGLPGGLFPFGVEVSMRGSKEPKIRTPRKLSRGRGPSETVKKHTSED
GGKCSVVGFSKYKAERATRGGPSLGAAGRGLRAGSREAPSPHPPRGGARAASTARASRQA
WGCERGRGDKPGLQPGFLQRPGKRQSFSSGSGEPRADADTSMCGTLIRQS

>gi568815584r:94668494_94870015|GENSCAN_predicted_CDS_1|513_bp
atggcctatgagacgagaaaacagcaaggaaggctcaactcgggcttgcccggggggctc
ttccccttcggcgtggaagtttcaatgcgaggaagcaaagagcctaaaatacgaacaccc
aggaaattaagcaggggaaggggcccttctgagacagtaaagaaacatacatccgaagac
ggtggaaagtgttcagttgttggcttcagcaaatataaagcagaaagagccacgaggggt
ggacccagcctgggcgcggctggccggggcctccgcgctggatccagggaagcgccgtcc
ccgcacccgccacgaggcggcgccagagcagcgtccacagcccgggcctctcggcaggct
tggggctgcgagaggggccgcggagacaaaccaggcctccaaccaggcttcctgcaaaga
ccagggaagcggcagagcttctcctcggggagcggtgaaccgagggccgacgcagacacc
tccatgtgtgggacactgattagacaatcatag

>gi568815584r:94668494_94870015|GENSCAN_predicted_peptide_2|51_aa
MTAVALELSAVWQLEEARWNAGLCALLQHATERRETPSRVSSDARSPYSEH

>gi568815584r:94668494_94870015|GENSCAN_predicted_CDS_2|156_bp
atgactgccgtagcccttgagctgtctgctgtatggcagctggaggaagcacgctggaac
gcaggcctgtgcgccctgctccaacatgccactgagcgcagggagacaccaagcagagtg
agttcagatgcccggtccccctatagtgaacattga

>gi568815584r:94668494_94870015|GENSCAN_predicted_peptide_3|329_aa
MLEAVLEESPREEAAFSWVMKGNLAAGKTIQAQDRDAVGILSSRTGESMENLQKNLLPKQ
RRRSRETFTMSGALDVLQMKEEDVLKFLVAGTHLGGTNLDFQMEQYIYKRKSDGIYIINL
KRTWEKLLLAARAIIAIENPADVSVISSRNTGQRAVLKFAAATEATPIAGHFTPGTFTNQ
IQADFWEPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNQGARSV
GLMWWTLAREVLRMRGTISREHLWEVMPDLYFYRDPEEIEKEEQAATEKAVTKEEFQGEW
TAPAPEFTATKPEVADWSEGVQVPSVPIQ

>gi568815584r:94668494_94870015|GENSCAN_predicted_CDS_3|990_bp
atgcttgaggcagtgctggaagagagccctcgggaggaggcggctttctcctgggtcatg
aaggggaatctggctgcaggaaaaaccatccaagcgcaagacagagatgctgtgggcatc
ctcagttccagaactggggaatccatggaaaacctgcagaaaaacttgctgcccaagcag
aggaggcgaagcagggaaactttcacaatgtctggagcgcttgatgtcctgcaaatgaag
gaggaggatgtccttaagttccttgtagcaggaacccacttaggtggcaccaatcttgac
ttccagatggaacagtacatctataaaaggaaaagtgatggcatctatatcataaatctg
aagaggacctgggagaagcttctgctggcagctcgtgctattattgctattgaaaaccct
gctgatgtcagtgttatatcctccaggaatactggccagagggctgtgctgaagtttgct
gctgccactgaagccactccaattgctggtcacttcactcctggaaccttcactaaccag
atccaggcagacttctgggagccaaggcttcttgtggttactgaccccagggctgaccac
cagcctctcacggaggcatcttatgttaacctacctaccattgctctgtgtaacacagat
tctcctctgcgctatgtggacattgccattccatgcaacaaccagggagctcgctcagtg
ggtttgatgtggtggacgctggctcgggaagttctgcgcatgcgtggcaccatttctcgt
gaacacctatgggaggtcatgcctgatctctacttctacagagatcctgaagagattgaa
aaagaagagcaggctgctactgaaaaggcagtgaccaaggaggaatttcagggtgaatgg
actgctccagctcctgagttcactgctactaagcctgaggttgcagactggtctgaaggt
gtacaggtgccctctgtgcctattcagtag

>gi568815584r:94668494_94870015|GENSCAN_predicted_peptide_4|383_aa
MPASMFSIDNILAARPRCKDSVLPVAHSAAAPVVFPALHGDSLYGASGGASSDYGAFYPR
PVAPGGAGLPAAVSGSRLGYNNYFYGQLHVQAAPVGPACCGAVPPLGAQQCSCVPTPPGY
EGPGSVLVSPVPHQMLPYMNVGTLSRTELQLLNQLHCRRKRRHRTIFTDEQLEALENLFQ
ETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQKRSSSEESENAEKWNKTSSSKA
SPEKREEEGAGDTKMSRTEPSAQGDPSQGGEQAQRHEPQDSGRKQFPGTGTPGPSQTIFS
TAECNGECLAQSDHRGQGQDEQSDQACVTPSLGSELSICFLGLLQPSPADCGHHKQQQLT
LSQSGGWKPEIKVSEGLCLFWWL

>gi568815584r:94668494_94870015|GENSCAN_predicted_CDS_4|1152_bp
atgcccgccagcatgttcagcatcgacaacatcctagccgcccggccgcgctgcaaggac
tcggtgttgccggtggcgcacagcgcggcggctcccgtcgtcttcccggccctgcacggg
gactcgctctacggcgccagcggcggcgcctcctcggactatggcgccttctacccgcgc
cccgtggcccccggcggcgcgggcctcccggccgcggtcagcggctcccgcctcggctac
aacaactacttctacgggcagctgcacgtgcaggcggcgcccgtgggcccggcctgctgc
ggggccgtgccgccgctgggcgcccagcagtgctcctgcgtcccgacgcccccaggctac
gagggccccggttcggtgctggtgtccccggtaccgcaccagatgctgccctacatgaac
gtgggcacgctgtcgcgcaccgagctgcagcttctcaaccagctgcactgtcggcggaag
cggcggcaccgcaccatcttcactgacgagcagctcgaagctctcgagaacctcttccag
gagaccaagtacccggacgtgggcacgcgcgagcagctggcccggaaagtgcacctccgc
gaggagaaagtggaggtctggtttaagaaccgccgcgccaaatggaggcggcagaagcgg
tcctcatcagaggagtcggagaacgcggagaagtggaacaagacgtcgtcgtcgaaggcg
tcaccggagaagagggaagaggaaggtgctggggacacgaagatgagcaggacagagccc
tcggctcaaggagaccccagtcagggaggtgaacaggctcagagacatgaaccccaagac
agtggcagaaaacagtttcctggcacagggacacccggcccatctcagaccatttttagc
acagctgagtgcaatggtgagtgcttggcccagagcgaccacagaggtcaaggtcaagac
gaacagtcagatcaggcctgtgtgaccccctctttaggctcagagctcagcatctgtttc
ctggggctgctgcaaccaagtcccgcagactgcgggcatcataagcaacagcaacttact
ctctctcagtctggaggctggaagcctgagatcaaggtgtcagaagggctgtgcttgttc
tggtggctctag

>gi568815584r:94668494_94870015|GENSCAN_predicted_peptide_5|75_aa
MAAFADIVVPISSPGTALGMARKSQPMKEEEMQMATQAMGQYWMAVRPCWDPDSHRKPQK
PVISSSIEGCLHPKA

>gi568815584r:94668494_94870015|GENSCAN_predicted_CDS_5|228_bp
atggcagcttttgctgacatcgtggttcctatcagctcccctggcactgcgctggggatg
gccaggaaatctcagcctatgaaagaggaagaaatgcaaatggctactcaggctatgggt
cagtactggatggccgtcagaccctgctgggaccccgattcacaccggaagccacagaag
ccggtcatcagcagctccatagagggctgcctacatccaaaggcatag

>gi568815584r:94668494_94870015|GENSCAN_predicted_peptide_6|76_aa
MGAYKYIQELWRKKQSDVMRFLLRVHCWQCVSSLLFTVLPAPPGLIKHTDWATRPNKVTL
YVGFVFAVVAENTQFP

>gi568815584r:94668494_94870015|GENSCAN_predicted_CDS_6|231_bp
atgggtgcatacaagtacatccaggagctatggagaaagaagcagtctgacgtcatgcgc
tttcttctgagggtccactgctggcagtgtgtcagctctctgctcttcacagtgctccct
gccccacctggcctgataaagcacaccgactgggctacaaggccaaacaaggttacatta
tatgtaggattcgtgttcgccgtggtggccgaaaacacccagttcccttag

>gi568815584r:94668494_94870015|GENSCAN_predicted_peptide_7|154_aa
MESASTSSLGEKVLESGCHRSIEKVDFPNGITKSTAAPWTDRCLWMSPTASICQGSCTIA
SEYKWKALKIYYQTPGLGPPDAPWGRRGGHICPPRDILSTELNGKLKGTCPRDSQVHAAV
QNETGFWGNTYTREEKLLQVGQRLFWCQETEGHN

>gi568815584r:94668494_94870015|GENSCAN_predicted_CDS_7|465_bp
atggagtctgcctccacctccagccttggagagaaggttctggaatctggttgccatagg
agtatagagaaagtagacttccccaatggaatcaccaagtccacagctgctccctggaca
gacagatgcctgtggatgtctccaactgcctccatctgccagggcagctgcaccatcgct
tcagagtataagtggaaagcattgaaaatttattatcagactcctggattaggccctcca
gatgccccatggggtcgaagggggggccacatctgccctccccgtgacatcctttccaca
gagctcaatgggaagctgaaagggacttgccctagagacagccaggttcatgctgctgtt
caaaatgaaacaggattctggggaaatacctacacaagagaggaaaagctgctacaagtt
ggacagagactcttctggtgtcaggaaacagaggggcacaactga

>gi568815584r:94668494_94870015|GENSCAN_predicted_peptide_8|84_aa
MESGNRARGLFKPHLVKTTTWFTENGRHLYYKRVLHTVREPSSKIPYRTGATGAATRISS
FLFTKAPNSAEMTVHQTQDQPLED

>gi568815584r:94668494_94870015|GENSCAN_predicted_CDS_8|255_bp
atggagtccggtaacagagccagagggctttttaaacctcatttggtgaagacgacaaca
tggttcaccgagaatggcagacacctgtactacaaaagggtcctacacactgttagggag
ccgtctagcaagattccataccgcacaggggccaccggggctgctacacggatttctagt
ttcctcttcaccaaggcacccaactcagcagaaatgactgtgcaccagacccaggaccag
cctttagaggactga

>gi568815584r:94668494_94870015|GENSCAN_predicted_peptide_9|35_aa
MERASVLLQKELAMALLRLVPAVTLSKMETRIVPV

>gi568815584r:94668494_94870015|GENSCAN_predicted_CDS_9|108_bp
atggaaagagcaagtgttctgctgcagaaagaacttgccatggccctgctccgccttgtg
ccagcagtgactctaagtaaaatggagacacgtatagtgcccgtgtag

>gi568815584r:94668494_94870015|GENSCAN_predicted_peptide_10|57_aa
RDSVLWDLQYCTADLLQSSGPRYAKDLVPNLANSRCFFHGDERQNFMVAKRVDFGVK

>gi568815584r:94668494_94870015|GENSCAN_predicted_CDS_10|174_bp
cgtgattccgttctctgggacctgcagtactgtactgcggacctgttgcagagctcaggg
ccaagatatgcaaaggacttggtccctaatctagcaaatagtaggtgcttcttccatgga
gatgagaggcagaatttcatggtagccaagcgtgtggattttggagtcaaatga