GENSCAN 1.0	Date run:  4-Nov-116	Time: 08:29:49

Sequence gi568815587r:111254264_111458918 : 204655 bp : 44.01% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1726   1829  104  2  2   37  101    92 0.549   5.29
 1.02 Intr +  13710  13799   90  2  0  -14  110    88 0.121   0.99
 1.03 Term +  17845  17874   30  0  0   94   52    27 0.517  -2.45
 1.04 PlyA +  18516  18521    6                               1.05

 2.00 Prom +  23071  23110   40                              -0.96
 2.01 Init +  26413  26559  147  0  0   83   95    21 0.570   2.39
 2.02 Intr +  27135  27177   43  2  1   73  109    20 0.803   0.41
 2.03 Intr +  29813  29935  123  0  0   55   76   129 0.494   8.96
 2.04 Intr +  29951  30114  164  0  2   55   59   197 0.435  13.19
 2.05 Term +  31390  31791  402  0  0   89   55   193 0.994  11.25
 2.06 PlyA +  31963  31968    6                               1.05

 3.00 Prom +  34553  34592   40                              -6.26
 3.01 Init +  38039  38163  125  1  2   74   91   135 0.615  12.04
 3.02 Intr +  44563  44663  101  1  2   52   53    51 0.354  -2.25
 3.03 Intr +  46264  46358   95  2  2   77   77   124 0.784   9.88
 3.04 Intr +  50665  50719   55  0  1   88   82    20 0.564  -0.05
 3.05 Intr +  52131  52360  230  1  2  125   51    58 0.852   3.39
 3.06 Intr +  53806  54094  289  0  1   76   -7   208 0.080   6.92
 3.07 Intr +  55480  55626  147  2  0    5   55   166 0.153   5.21
 3.08 Intr +  68856  68915   60  1  0   90  101    28 0.506   3.01
 3.09 Intr +  76474  76497   24  2  0  112   82    11 0.358   0.90
 3.10 Intr +  78714  78863  150  1  0  101   60    16 0.394   0.23
 3.11 Term +  81450  81622  173  1  2   83   55    89 0.734   3.09
 3.12 PlyA +  83125  83130    6                               1.05

 4.00 Prom +  86561  86600   40                              -3.86
 4.01 Init +  90877  90960   84  0  0   84  116    39 0.928   7.12
 4.02 Term +  93265  93279   15  0  0   93   55    18 0.689  -2.76
 4.03 PlyA +  93483  93488    6                               1.05

 5.09 PlyA -  94666  94661    6                               1.05
 5.08 Term - 100312  99998  315  1  0  118   48   220 0.955  15.94
 5.07 Intr - 103447 103182  266  2  2  113   92   239 0.987  24.03
 5.06 Intr - 103574 103532   43  2  1  145   86    44 0.994   7.71
 5.05 Intr - 104655 104525  131  1  2   40   81   118 0.676   6.71
 5.04 Intr - 108805 108693  113  0  2   41   54   100 0.576   1.92
 5.03 Intr - 109019 108916  104  2  2   48   59    41 0.500  -3.83
 5.02 Intr - 109726 109570  157  0  1   57   81   112 0.918   7.41
 5.01 Init - 111145 111108   38  1  2   84   97    62 0.988   6.19
 5.00 Prom - 114978 114939   40                              -6.66

 6.00 Prom + 119202 119241   40                              -2.16
 6.01 Init + 125624 125726  103  1  1   61   13   151 0.644   5.30
 6.02 Intr + 133376 133428   53  0  2   52   70    46 0.019  -2.17
 6.03 Intr + 135993 136068   76  2  1   31  106    91 0.459   4.29
 6.04 Intr + 142105 142181   77  2  2  126   61    -2 0.111   0.13
 6.05 Intr + 144412 144490   79  0  1   81   89    28 0.073   1.32
 6.06 Intr + 149469 149584  116  1  2    8   54   165 0.017   5.27
 6.07 Intr + 162329 162494  166  1  1   97   63    38 0.419   1.73
 6.08 Intr + 164886 165002  117  1  0   66   81    39 0.295   1.44
 6.09 Intr + 176785 176917  133  2  1  116   53    22 0.003   1.20
 6.10 Intr + 194290 194404  115  1  1  110   55    48 0.471   4.15
 6.11 Intr + 196077 196182  106  2  1  121   95    42 0.991   7.99
 6.12 Intr + 196700 196871  172  0  1   60   76   143 0.912   9.30
 6.13 Intr + 196984 197146  163  1  1  113   14   229 0.474  17.98
 6.14 Intr + 199724 199766   43  1  1   81   39    18 0.131  -5.99
 6.15 Intr + 199973 200094  122  0  2  103   78    76 0.909   8.31
 6.16 Intr + 200700 200825  126  2  0   66   80    31 0.635   0.98
 6.17 Intr + 200912 201318  407  1  2   62   71   154 0.338   4.25
 6.18 Intr + 201494 201615  122  2  2  129   99   127 0.999  18.04
 6.19 Intr + 202252 202476  225  2  0   51  105   268 0.863  22.76
 6.20 Intr + 202744 202958  215  2  2   85   44   182 0.690  11.93
 6.21 Term + 203582 203662   81  1  0  114   53    18 0.249  -1.41
 6.22 PlyA + 204399 204404    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:111254264_111458918|GENSCAN_predicted_peptide_1|74_aa
XDYSKRVYQGVRVKHTVKDLLAEKRSGQTSNSRLNKSNTILLLFGILMVVLNNNENAKRR
RSRIQVCDMQFLTF

>gi568815587r:111254264_111458918|GENSCAN_predicted_CDS_1|225_bp
ngagactacagcaaacgagtgtatcaaggagtgagagtgaagcatacagtcaaagatctc
ctggcagaaaaacgatccgggcagacaagtaactcaagacttaataaatctaataccata
ctactgctctttggcattctaatggtggtgctaaacaacaatgaaaatgccaaaagaaga
agaagtcgaatacaggtatgtgacatgcagttcctcacattttga

>gi568815587r:111254264_111458918|GENSCAN_predicted_peptide_2|292_aa
MARKHKSSDTGNLDMPKRSRNVLPLNEKVNVLNLIRKEKKCMLRSDIGMGSVSSSQSPFV
QMPGSPVTSGYYGVRRSFLSDSDFHNSKQFSNDVYTSSVGKPFPWQSHAALLEPYFPQEP
YGDYRPPALTPNAGSLFSASPLPPLLPPPFPGDPAHFLFRDSWEQTLPDGLSQPDPVSAD
ALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGAQSYSLHALEDLHHTPGYPTPPPYPF
TPFMTVSNDLPPKVGPLSPDEEADTGSLHDPSPWVKEDGSIAWGSYECRRAY

>gi568815587r:111254264_111458918|GENSCAN_predicted_CDS_2|879_bp
atggcccgaaagcacaagagtagtgacactggcaatttagatatgccaaagagaagccgg
aatgtgcttcctttaaatgaaaaagtaaacgttctcaacttaataaggaaagaaaaaaaa
tgtatgctgaggtcagacattggtatgggcagcgtcagttcctctcagtctccatttgtg
cagatgccaggttcgccggtcacgtcaggttactacggtgtcagaagatctttcttatct
gactcagacttccacaacagtaaacagttttcaaatgacgtctacacctccagcgtgggg
aagccgtttccctggcagagccatgcggctctcctggagccctacttcccccaggagccc
tacggagactaccggcctccggcgctgacgcccaacgcgggctctctgttcagcgcctcg
cccctaccgccgctcctgccaccgcccttccccggagacccagctcacttcctatttagg
gactcatgggagcagacgttgcctgacggtctcagccagcctgaccctgtgtctgccgat
gccctgctgaccttgccacccagcacgagttgcctctcccagcttgagtccgggagcatc
gcccagcacaggggctcaagctgggggtcatccctggctggggctcagtcatactcgctg
catgctctggaagatctgcaccacactccggggtaccctaccccgcctccttaccccttc
acccctttcatgacggtgtcaaatgacctaccgcccaaggtggggccactctccccagat
gaggaagcagacaccggttccctccatgacccttccccttgggtgaaagaagatgggagt
attgcctgggggtcatatgaatgccgcagagcttattga

>gi568815587r:111254264_111458918|GENSCAN_predicted_peptide_3|482_aa
MGKDFMSKTPKAMATKAKIDKWDLIKLKSFYTAKETTIRVNRPPPALPRIHCCVLRHAVR
TLRAQKLLRGELEAHKKPKVYQGVRVKITVKELLQQRRAHQAASGGTRSGGSSVHLSDPV
APSSAGLYFEPEPISSTPNYLQRGEFSSCVSCEENSSCLDQIFDSYLQTEMHPEPLLNST
QSAPHHFPDSFQATPFCFNQSLIPGSPSNSSILSGSLDYSYSPVQLPSYAPENYNSPASL
DTRTCGYPPEDHSYQHLSSHAQYSCFSSATTSICYCASCEAEDLDALQAAEYFYPSTDCI
KAQDLISEVKSEEPLPHLKCQYNGSNTGTFSIGHRYHFLSTSYVPELFISTPEKNPKHLG
SRTTSRDGCRNLNLKGVNTEAHRGHHLPNWTAVKPQLTPLAASSCNFSTLSLVLLSLERQ
CFSPTRISQGFCCTWQRSESDQKHKCTELSFLPGQCPKTLWQDLWFNDFLYFLHHFARQQ
IS

>gi568815587r:111254264_111458918|GENSCAN_predicted_CDS_3|1449_bp
atgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctacacagcaaaagaaactaccatcagagtg
aacaggcccccgcccgccctcccacgtatccactgttgtgtcctgagacacgcggtgcgg
accctgcgcgcccagaagctgctacggggggagctagaggctcacaaaaaaccgaaggtg
tatcaaggtgtccgagtgaagatcacagtgaaggagctgctgcagcaaagacgggcacac
caggcggcctccgggggaacccggtccggaggcagcagtgtccacctttcagacccagtt
gcaccatcttctgcaggactgtattttgagcctgaaccaatttcttccacgcccaattat
ttgcaacggggagaattttccagttgtgtttcatgtgaagaaaactcaagctgcctcgac
cagatctttgattcctaccttcagacagagatgcacccggagcctttgctcaattccaca
caaagtgctccacaccatttcccagacagcttccaggccacccctttctgctttaaccag
agcctgatcccaggatcaccttcaaattcctccattctctctggctccttagactacagt
tactcgccagtgcagctgccttcatatgctccagagaattacaattcccctgcttctctg
gacaccagaacctgtggctaccccccagaagaccattcctaccaacacttgtcctcacac
gcccagtacagctgcttctcctcggccaccacctccatctgctactgcgcatcgtgtgag
gcagaggacttggatgctctccaggcagcagagtacttctacccgagcacagactgcatt
aaggcacaggacttaatctctgaagtgaagtctgaagagcctttgccacatctcaagtgc
cagtacaatggcagcaatactggtaccttcagcattggccacaggtaccattttctgagc
acgtcctatgtgccagaattatttatttctactcctgagaaaaaccctaagcacttaggg
tctagaaccacatcccgagacggctgcaggaacctgaacttgaaaggtgtaaacactgag
gcccatagaggtcatcacctgcccaactggacagctgtgaagccacagctcacaccactt
gctgcatcctcctgcaatttcagcacactttctcttgtgctgctctccctggaaagacag
tgcttttccccaacacgcataagccaaggtttctgctgcacctggcaaagaagtgaatca
gatcagaagcacaaatgcacggaactgagttttctgcctggacagtgtcctaagactctc
tggcaagatctctggtttaacgacttcctgtactttcttcatcatttcgccagacagcag
atctcctga

>gi568815587r:111254264_111458918|GENSCAN_predicted_peptide_4|32_aa
MLLPLLTYTLVISQLRDKVQKRPQKYQKTGFE

>gi568815587r:111254264_111458918|GENSCAN_predicted_CDS_4|99_bp
atgctgctgcctctgctgacctatacattggttataagtcaactgagggacaaagttcaa
aagagaccacaaaagtaccagaagacgggatttgagtga

>gi568815587r:111254264_111458918|GENSCAN_predicted_peptide_5|388_aa
MALYGYKVYLLFSGIERQYGELLSPKKEISNQGREAHAKVERFSSVMDSWIPTGDLKGPQ
TTGLMLESVTEFLGSWLWTRAGQSGDPWELWESCNVNRKSTSTKRSLFIDLETVGGGKPS
LDKILEVASWSLSSQVCATAPEQAPAPARPYQGVRVKEPVKELLRRKRGHASSGAAPAPT
AVVLPHQPLATYTTVGPSCLDMEGSVSAVTEEAALCAGWLSQPTPATLQPLAPWTPYTEY
VPHEAVSCPYSADMYVQPVCPSYTVVGPSSVLTYASPPLITNVTTRSSATPAVGPPLEGP
EHQAPLTYFPWPQPLSTLPTSTLQYQPPAPALPGPQFVQLPISIPEPVLQDMEDPRRAAS
SLTIDKLLLEEEDSDAYALNHTLSVEGF

>gi568815587r:111254264_111458918|GENSCAN_predicted_CDS_5|1167_bp
atggccttgtacggctacaaggtttacctgttgtttagtggtatagaaaggcaatatggt
gaacttctcagcccgaaaaaggagatctccaatcagggccgagaggctcatgctaaggtg
gaaagattttcctccgtgatggactcttggatacctacgggagacttaaaaggccctcag
accacaggattaatgctggagtcagttacagaattccttggcagctggctgtggacacgt
gccgggcagtcaggagacccgtgggagctgtgggagtcctgcaacgtcaataggaagagc
acctccaccaagcgctctttgttcatcgacttagaaacagtaggaggcgggaagccctct
cttgacaagatcctggaagtggccagctggtccctttccagccaagtgtgtgccacagct
ccggagcaagccccagccccggcccggccataccagggcgtccgtgtgaaggagccagtg
aaggaactgctgaggaggaagcgaggccacgccagcagtggggcagcacctgcacctacg
gcggtggtgctgccccatcagcccctggcgacctacaccacagtgggtccttcctgcctg
gacatggaaggttctgtgtctgcagtgacagaggaggctgccctgtgtgccggctggctc
tcccagcccaccccggccaccctgcagcccctggccccatggacaccttacaccgagtat
gtgccccatgaagctgtcagctgcccctactcagctgacatgtatgtgcagcccgtgtgc
cccagctacacggtggtggggccctcctcagtgttgacctatgcctctccgccactcatc
accaatgtcacgacaagaagctccgccacgcccgcagtggggcccccgctggagggccca
gagcaccaggcacccctcacctatttcccgtggcctcagcccctttccacactacccacc
tccaccctgcagtaccagcctccggccccagccctacctgggccccagtttgtccagctc
cccatctctatcccagagccagtccttcaggacatggaagaccccagaagagccgccagc
tcgttgaccatcgacaagctgcttttggaggaagaggatagcgacgcctatgcgcttaac
cacactctctctgtggaaggcttttag

>gi568815587r:111254264_111458918|GENSCAN_predicted_peptide_6|938_aa
MGALALMSAMPTEKEANPQGRKENMPVLFDWIWACSWQVSMPHFADEKTKDQQIFAECHP
TVIQSVFGIKDGTVNKESLSQVSPISLPNQVYPHAPILLQFQQVMVLLLVWESHSDTFPL
KLGMAVRPGGPKEMAHGMYWLDDDGDDSIDDIGDIDGNDGGDDNGGSNCETPRTSRQRLS
WVGQCEQRARALRLEPLHLYSGSTAYPVTVRKRFDFSQSPFPLESYPEVLGIRKSTYKLG
GEEGGCTIQPMTEVNTDAQRSAMPQSVTKGFDIQKQKLKDLSEGRTYLCTLTQAVKEGYI
VQYCIERFFNPWPGQDACFPCGSEATQPEKGKDTCVCRGPGRVFQDFYLLDQPSPPRAVG
HPCNLDLGQKSVPLYVVKMDGKSREGHLDSSWSLSLNSTHLGDLLPPEPGIRNPTVCLQV
NDTLAFLVTHEHYPEYDLGHFYNTLEQYDWRRFRALAEESQLYEQSLSLFLQQFQKPGIY
VFRLSSNRHRKMNFNVDMNFLGIFCFSGSWEAEEQVDLEWFDTEAFFGDCLRQSLSVTAK
LSHTKEELKLLYLKLLGEARSLQQLWGTRRCLPASANRLLRSVQREQQQHLPNLFHLPGP
KALTYSSHHLWEFLIPFAAAAMPVQNNSGVPKVSGVSPSLLSLVAVAPAGEQAGLSLTQA
AEAAAWAAEEKASRRRHLAGEYAASLRHQLKLLRQNLLGRQEQWASFCSTLREVQQQLKA
QMGSRAVPQLDTVLGHLSQVVLQEGHRLKAWGILGTGTGAELLRPAPAGPPGADDISVNP
VTKLMVPGPNSLMLPASGHAGSIPPGYFIHPDTGRVLPEAGHLGYDLLRATLVPTMDTNA
GLKEAGALKGTNSSLYPCPGGVRTSEAAILPYVPYPTSPTTGSPPATHLPILQPRRTSPL
GALMTDPVTGIKLSYLYWEGCEMLRGTSCCLVTALWSH

>gi568815587r:111254264_111458918|GENSCAN_predicted_CDS_6|2817_bp
atgggggcgctggctctgatgtcggctatgcccacggaaaaagaggccaaccctcaagga
aggaaggagaacatgcccgtgctctttgactggatctgggcttgcagctggcaagtgtcc
atgccccattttgcagatgagaaaaccaaggaccagcaaatatttgctgaatgtcatccc
actgtcatccagtctgtatttggcattaaggatggaacagtgaacaaggaaagcctctcc
caagtcagccccatttcccttcccaaccaagtctacccacatgcccccattctgctgcag
ttccagcaggtgatggtgctgctgctggtctgggaatcacacagtgacaccttcccactt
aaactaggaatggctgtcaggcctggtggtcctaaggaaatggcacatgggatgtactgg
ttagatgatgatggtgatgacagtattgatgatattggtgatattgatggtaatgatggt
ggtgatgataatggtggtagcaattgtgaaacccccaggacatcccgacagcgtctgtcc
tgggtgggccaatgtgagcagagagcacgggctttgaggctggagcccctgcatttgtat
tctggctccaccgcctaccctgtcaccgtgagaaagcggtttgacttctctcaatctcct
tttcccctagagtcatatcctgaggtactggggattaggaagtcaacctataaacttgga
ggagaagaaggaggctgcacaattcagcccatgacagaagttaacactgatgctcagaga
agtgccatgcctcagtcagtgacgaaagggtttgatattcaaaagcagaaattaaaggac
ttatctgaaggcagaacatatttgtgtaccttaacccaggcagtaaaggagggctatatt
gttcagtattgtattgagaggttcttcaacccctggcccggccaggatgcctgtttcccc
tgtggctcagaggccacccagccagagaagggcaaggacacgtgtgtctgccgggggcct
gggcgagtgttccaagatttttaccttctggaccagccttccccaccacgtgctgtgggc
catccctgcaacttggacttagggcagaagtctgtccccctctatgtggtcaagatggat
ggaaagtctagggaaggacatctggactcttcttggtcactgagcctcaactccacacat
cttggggatctgctgcccccagagccaggcatccgaaaccccacagtctgcctccaagtc
aatgataccctggccttcctggtgactcatgagcattacccagagtatgacctgggccac
ttctataacacactggagcaatatgactggcggcgcttccgggccctggctgaggagtcc
cagctctatgagcaaagcctcagcctctttctgcagcagttccaaaagccgggcatttat
gtctttcgtctgagcagcaaccgacatcggaagatgaactttaatgtagatatgaatttc
ctggggatcttctgcttcagtgggagctgggaggctgaggagcaggtagatctggagtgg
tttgacacagaggccttctttggagactgcctcaggcagtctctgtcagtgacagccaaa
ctcagccacacgaaggaagagctcaaactcctctaccttaaacttctgggtgaagcccgt
tctctccagcagctgtggggaacaaggcgctgcctcccagcctccgctaaccggcttctg
aggagcgtgcagagggagcagcagcagcacctccccaacctgttccatctccctggccct
aaagctcttacctacagttcccaccatctctgggaatttctcatcccctttgccgctgct
gccatgcctgtccagaataactctggagttcccaaggtgagtggggtgtccccgagcttg
ctgtccctggtggctgtagcgcctgcaggtgagcaggcagggttgtctctgacccaggct
gctgaggcagctgcctgggctgcagaagagaaggccagccggaggaggcacctggcaggc
gagtacgcagccagccttcgtcaccaactcaagctccttcgccaaaacctcctcgggagg
caggagcagtgggcctctttctgctcgacgctgagggaggttcagcagcagttgaaagca
cagatgggctccagggcagttccccagctggacacggtgctgggccacctgtcccaggtc
gtgctgcaggagggccaccgcctgaaggcctggggcattctgggcaccggcactggggcg
gagctactgaggccagccccagcaggccctcctggtgctgatgacatcagtgtgaacccc
gtcaccaagttgatggtccctggccccaactccttgatgcttccagccagcggccacgca
ggctccataccccctggctacttcatccaccctgacactgggagggtgctgcccgaggct
ggacacctgggatatgatctgctgagagctaccctggtgcccactatggacaccaatgcc
gggctgaaggaggctggtgcattaaagggtaccaacagctccctgtatccctgtccaggt
ggtgtccgaacatcagaagctgccatcctgccctatgtgccctacccaaccagtcccacc
acaggttcccctccagccacgcacctgcccatcctgcagccaagaaggacgtccccgctg
ggggctctcatgacagaccccgtcacaggcatcaagctcagctacttgtactgggagggc
tgcgagatgcttcggggaacctcttgctgcctggtgacagctttgtggagccactga