GENSCAN 1.0	Date run:  4-Nov-116	Time: 08:29:20

Sequence gi568815584f:75337921_75569472 : 231552 bp : 45.72% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  10500  10658  159  2  0   39   62   117 0.096   4.02
 1.02 Intr +  17169  17268  100  2  1   86   78    49 0.178   3.38
 1.03 Intr +  17486  17511   26  0  2  107   78    14 0.038   0.04
 1.04 Intr +  26211  26305   95  2  2   89   77    19 0.020  -0.34
 1.05 Intr +  37527  37727  201  0  0   82   36   346 0.994  27.20
 1.06 Intr +  90653  90686   34  2  1  131   84    19 0.681   4.03
 1.07 Intr +  94198  94346  149  0  2  109   24   183 0.252  13.03
 1.08 Intr +  98350  98489  140  1  2    5  103    37 0.052  -2.99
 1.09 Intr +  99978 100196  219  1  0  109   59   232 0.337  20.67
 1.10 Intr + 103485 103650  166  1  1   52  113    85 0.505   6.42
 1.11 Intr + 116104 116220  117  1  0   31   68   118 0.351   3.68
 1.12 Intr + 119867 119954   88  2  1   66   60    31 0.109  -1.93
 1.13 Intr + 123506 123610  105  1  0   96   88   183 0.944  19.51
 1.14 Term + 131370 131555  186  2  0   71   47   424 0.820  34.09
 1.15 PlyA + 134758 134763    6                               1.05

 2.00 Prom + 135890 135929   40                              -0.46
 2.01 Init + 151782 151898  117  2  0   83   -7   135 0.114   3.70
 2.02 Intr + 157201 157320  120  0  0   62   94    16 0.063   0.29
 2.03 Intr + 176094 176202  109  2  1   72   15    84 0.186  -0.64
 2.04 Intr + 177229 177497  269  2  2   18   94   132 0.259   4.05
 2.05 Intr + 187164 187268  105  2  0  114  119   114 0.996  17.51
 2.06 Term + 208542 208751  210  2  0   83   49   404 0.898  33.29
 2.07 PlyA + 209053 209058    6                               1.05

 3.06 PlyA - 209067 209062    6                              -6.84
 3.05 Term - 209382 209100  283  2  1   -9   48   257 0.188   6.90
 3.04 Intr - 210983 210691  293  2  2   71   85    50 0.074  -1.07
 3.03 Intr - 212918 212710  209  0  2   53   51    92 0.057   0.80
 3.02 Intr - 221370 221229  142  0  1  -40    4   337 0.364  12.43
 3.01 Init - 224036 223908  129  2  0   78   89    72 0.826   6.45
 3.00 Prom - 226264 226225   40                              -3.96

 4.02 PlyA - 226620 226615    6                               1.05
 4.01 Term - 231477 231378  100  2  1   98   48    88 0.475   3.40

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 184763 184825   63  1  0   83   80    45 0.828   4.35
S.002 Term + 190009 190068   60  0  0   82   44    92 0.967   2.00


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:75337921_75569472|GENSCAN_predicted_peptide_1|594_aa
MFDVVQTADPTHYFIHGAWLETEEARHHHHKSSDLITKYLMVLEISTCCLGLLFRGLDLT
VFILSITKPVSLCIQEATKCLEIEEGEYYEFQHGETGFLHIMESMVAGSPRLSPPSRKDP
VFSRKLCTAIATNAITITITITTITTTITITTTTINTYTITTISTIISTIIITMPPPPPL
PLPMPEWKRSGGAREVLSSGGGEGGSWGQPSEEGLLLLAFTLSLGAFPIILLLAFWISST
FGSRVTYVIQIPRERPLLQETESPRTMWPSEYINCPTEKYCPMDIRSSLFCQIHLSPWEE
TGWPATPPAMMPGQIPDPSVTTGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLH
FLEVKLGKRPQPVKIPLFKPYLLSIYYVLSTAPGTGNRATDKAVKALHLSAPYIAVTASK
SKQINTRYISYVFENAYEKSEFKITSGLLFVTVEMPRHLQTGPEKHGNGQCASREGRLPA
LLAYYKQREEATPAEKAPLDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLEL
MNAELKTQIEELKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK

>gi568815584f:75337921_75569472|GENSCAN_predicted_CDS_1|1785_bp
atgtttgatgttgtacagacagcagaccctacccactacttcattcatggtgcctggttg
gagactgaggaagccaggcaccaccatcataaatcctcagacctcatcacgaaatacctg
atggttctggagataagtacctgctgcctgggcctcttgtttcggggtctggacctcact
gtgtttatactcagcatcacgaagcccgtgagcttgtgtatacaggaggccaccaaatgt
ttggagatagaggagggagagtattatgagtttcagcatggtgagacaggctttctccac
atcatggaatcaatggttgctggcagtcccagactctcacctcccagcagaaaggaccct
gttttttcccgcaaactttgcactgccattgccacaaacgccatcactatcaccatcacc
atcacaaccattactactaccatcaccatcaccaccaccaccatcaacacctataccata
actaccatctccaccatcatcagcaccattatcatcaccatgccaccaccaccaccactg
ccattgccaatgcctgagtggaagaggagtggaggagcgagggaggtgctctcctcgggc
ggcggggaaggcgggagctggggacagccatctgaagagggccttttgctgctcgccttc
actctcagtcttggggccttccccatcatcttgcttctcgccttctggatctcctcgact
tttggaagccgcgtgacctacgtcattcagattccaagagagaggccactcctgcaggag
acagagagcccaagaaccatgtggccatctgagtacattaactgcccaacggagaagtat
tgtccgatggacatcagatcttccctcttctgccaaatacatctctctccatgggaagag
acaggctggcctgccactcctcctgctatgatgcctgggcagatcccggacccttcggtg
accacaggctccctgccagggcttggccccctgaccgggctccccagctcggccctgact
gtggaggagctgaaatacgctgacatccgcaacctcggggccatgattgcacccttgcac
ttcctggaggtgaaactgggcaagaggccccagcccgtgaaaatccctttgttcaagcca
tatttgttaagcatctactatgtgctgagcactgcaccaggcactgggaacagagctaca
gataaagcagtcaaagccttacatctctcggcaccgtatattgcagtgacggcatccaaa
agtaagcaaattaatacacgatatataagctatgtttttgaaaacgcttatgaaaagtca
gaattcaaaatcacatctgggctgctgtttgtcacagtggaaatgccgcgccacctgcag
acggggcctgagaaacacggaaatggccagtgtgcttctagggaaggcaggctcccagct
ttgctggcctactacaaacagagagaagaggccaccccggcagagaaagctcccctagat
gaggaagaggagcgaaggaaaaggcgccgggagaagaacaaagtcgcagcagcccgatgc
cggaacaagaagaaggagcgcacggagtttctgcagcgggaatccgagcggctggaactc
atgaacgcagagctgaagacccagattgaggagctgaagcaggagcggcagcagctcatc
ctgatgctgaaccgacaccgccccacctgcatcgtccggaccgacagtgtcaagaccccc
gagtcagaaggcaacccactgctcgagcagctcgagaagaagtga

>gi568815584f:75337921_75569472|GENSCAN_predicted_peptide_2|309_aa
MQRMVFLTESEEAVCSVPLQNAKKSWLVLEPSTPEHLKTDMAILMMAEAAINQVHPSCKF
MESSKQLHDTYTGNIFIFQVQEEEALQEAALMPTPAAASGWLDVLSAWPYPQVEVEGKQP
TVAPKDPDRQRPRAAAEGTGSHFLHFTSSCLACIDDLNWGVNPKRSSASSRRMMRTDSGL
VNLRERESVGANEAKGARLLSAPRQDSSDDVRRVQRREKNRIAAQKSRQRQTQKADTLHL
ESEDLEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAASTPSPPEVVYSAHAFHQP
HVSSPRFQP

>gi568815584f:75337921_75569472|GENSCAN_predicted_CDS_2|930_bp
atgcaaaggatggtgtttctcacggagtcagaggaggccgtctgctccgtgcccttacag
aatgccaagaagtcatggctggtgctggagccctcaaccccagaacaccttaagactgat
atggccatattaatgatggcagaggctgccattaaccaagtgcacccaagctgtaaattc
atggaatcctccaaacagctccatgatacatatactggtaatatcttcatttttcaggtg
caggaagaggaggccctgcaggaagcagctctgatgcccactccggctgctgccagtggc
tggctggatgtgctatcagcatggccatacccacaggttgaagtagagggaaagcaaccc
actgtggccccgaaagacccagaccgccagcggccccgggcagccgccgagggcaccggc
tcacacttcctgcatttcacaagctcttgcttggcatgcattgatgacttgaactggggg
gttaacccaaaaagatcaagtgcgagctcaaggcggatgatgagaacagattcggggctg
gttaacctcagagagcgggagtccgttggtgctaatgaggccaagggagcccggctcctt
tctgcccccaggcaggactcatctgatgatgtgagaagagttcagaggagggagaaaaat
cgtattgccgcccagaagagccgacagaggcagacacagaaggccgacaccctgcacctg
gagagcgaagacctggagaaacagaacgcggctctacgcaaggagatcaagcagctcaca
gaggaactgaagtacttcacgtcggtgctgaacagccacgagcccctgtgctcggtgctg
gccgccagcacgccctcgccccccgaggtggtgtacagcgcccacgcattccaccaacct
catgtcagctccccgcgcttccagccctga

>gi568815584f:75337921_75569472|GENSCAN_predicted_peptide_3|351_aa
MEYYAAIKRNKIMSFAATWMELETITLSELTQKWKNKYCIFSLKEKEEEEEEKGEEEEEK
GEEEEEEKGEEEEDEEEEEEKKEKEKKWILGAEASSLDTSSRVWTRPLVCASLDPRDGSC
GGECGRNLVFQAGMSAGMNWRLLWYRKNQGRARKRQAAVRRGGKELDRALATKIQVLKEI
KKAPPHDTSAQSTWRLCTERGACFATFRWETKGYNARFCAGRNASTQGTSSGLSSQALNY
GAQPSVHILGSHGHQLLCLSQDLRNSVKKKEEEEEKGEKRRRRRKEEEEEEKEKEKEKET
PREGIESFPSTSINHGKEELLVESLELFEGTRVQKTKKVPTSQNLECQGTG

>gi568815584f:75337921_75569472|GENSCAN_predicted_CDS_3|1056_bp
atggaatactatgctgccataaaaaggaacaagatcatgtcctttgcagcaacatggatg
gagctggagaccattaccctgagcgaactaacacagaaatggaaaaacaaatactgcata
ttctcacttaaggagaaagaggaggaggaggaggagaaaggggaggaggaggaggagaaa
ggggaggaggaggaggaggagaaaggggaggaggaggaggacgaagaggaggaggaggag
aagaaggagaaggagaagaaatggattctgggagctgaagcctcttccctggatacttct
tcccgagtgtggaccagaccactggtatgtgcatctctggacccaagggatgggtcctgt
gggggtgaatgtggacggaatttggtcttccaggctggcatgtccgccggcatgaactgg
aggctgctgtggtacaggaagaaccaggggagggcaagaaagcggcaagctgcagtccgg
aggggtgggaaagagctagacagagcgttagctaccaaaatccaggttctgaaggaaatt
aagaaagctcctcctcatgacacatctgcccagtccacatggaggctctgcactgaaagg
ggagcctgttttgccacgtttcgttgggagaccaaaggttacaatgcaagattctgtgct
gggagaaatgccagcactcagggaacgtcttctgggctgtcttcccaggctctgaattac
ggggctcagcccagtgtccacatcctaggctcccatgggcaccagcttctctgcctgagc
caagatctgagaaattctgtcaagaagaaggaggaggaggaggagaagggggagaagagg
aggaggaggagaaaggaggaggaggaggaggagaaggagaaggagaaggagaaggagaca
cctagagaaggaattgaaagcttcccaagtacatcaataaaccatggaaaagaggagctg
ttagtggagtccctagagctctttgagggtactagagtccaaaaaacaaagaaggtccca
acatcgcagaatttagagtgtcaagggacagggtga

>gi568815584f:75337921_75569472|GENSCAN_predicted_peptide_4|33_aa
XDLCHHKIKRPENLLPIQSVNSHENPIIKFYGK

>gi568815584f:75337921_75569472|GENSCAN_predicted_CDS_4|102_bp
nntgacctctgtcaccacaagatcaagaggccagagaacctacttccaattcagagtgtg
aattcccatgaaaatccaatcatcaaattctatggaaagtaa